RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 WNT2P09544 360 aa11.78□□□□□ -0.52
LIG1-203ENST00000536218 FTH1P19P0C7X4 201 aa11.78□□□□□ -0.52
LIG1-203ENST00000536218 ZNF90Q03938 601 aa11.78□□□□□ -0.52
LIG1-203ENST00000536218 ARL16Q0P5N6 197 aa11.78□□□□□ -0.52
LIG1-203ENST00000536218 GPR146Q96CH1 333 aa11.78□□□□□ -0.52
LIG1-203ENST00000536218 NEIL1Q96FI4 390 aaPredicted RBP11.78□□□□□ -0.52
LIG1-203ENST00000536218 IGKV1D-33P01593 117 aa11.78□□□□□ -0.52
LIG1-203ENST00000536218 IGKV1-33P01594 117 aa11.78□□□□□ -0.52
LIG1-203ENST00000536218 PLCXD3Q63HM9 321 aa11.78□□□□□ -0.52
LIG1-203ENST00000536218 SMIM12Q96EX1 92 aa11.78□□□□□ -0.52
LIG1-203ENST00000536218 BOD1L1Q8NFC6 3051 aa11.78□□□□□ -0.52
LIG1-203ENST00000536218 ZNF503-AS2A6NEH8 195 aa11.77□□□□□ -0.52
LIG1-203ENST00000536218 DEFA4P12838 97 aa11.77□□□□□ -0.52
LIG1-203ENST00000536218 NTF3P20783 257 aa11.77□□□□□ -0.52
LIG1-203ENST00000536218 KITLGP21583 273 aa11.77□□□□□ -0.52
LIG1-203ENST00000536218 LCN12Q6JVE5 192 aa11.77□□□□□ -0.52
LIG1-203ENST00000536218 TM2D1Q9BX74 207 aa11.77□□□□□ -0.52
LIG1-203ENST00000536218 J3QW42 95 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 HS3ST1O14792 307 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 SPINK4O60575 86 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 KRASP01116 189 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 IER3P46695 156 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 GABRA2P47869 451 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 MORN2Q502X0 79 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 ZNF766Q5HY98 468 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 AMMECR1LQ6DCA0 310 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 Q8N976 141 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 DERL1Q9BUN8 251 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 DPRXA6NFQ7 191 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 ZNF253O75346 499 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 GPX1P07203 203 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 CD99P14209 185 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 VDAC1P21796 283 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 HOXC12P31275 282 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 NPBWR2P48146 333 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 TMEM144Q7Z5S9 345 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 NIT1Q86X76 327 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 GAPTQ8N292 157 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 OR1K1Q8NGR3 316 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 Q96M66 194 aa11.77□□□□□ -0.53
LIG1-203ENST00000536218 MDFIC2A0A1B0GVS7 189 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 OR5B21A6NL26 309 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 SAP30O75446 220 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 PIGYQ3MUY2 71 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 KIAA1644Q3SXP7 199 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 MDS2Q8NDY4 140 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 OR2T8A6NH00 312 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 ZNF891A8MT65 544 aaPredicted RBP11.76□□□□□ -0.53
LIG1-203ENST00000536218 C11orf94C9JXX5 98 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 SMPD2O60906 423 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 WISP2O76076 250 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 SPANXN5Q5MJ07 72 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 FAM19A2Q8N3H0 131 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 ZNF525Q8N782 197 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 ZNF114Q8NC26 417 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 OR4C12Q96R67 309 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 TP73-AS1Q9UF72 201 aa11.76□□□□□ -0.53
LIG1-203ENST00000536218 RAB29O14966 203 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 NDUFB4O95168 129 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 NGFP01138 241 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 FRMD6-AS1P0C7T7 363 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 NPPCP23582 126 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 BMI1P35226 326 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 SERF2P84101 59 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 CNN3Q15417 329 aaKnown RBP11.75□□□□□ -0.53
LIG1-203ENST00000536218 TNFRSF14Q92956 283 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 ST6GALNAC6Q969X2 333 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 TMEM45BQ96B21 275 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 LRFN3Q9BTN0 628 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 ZNF442Q9H7R0 627 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 PSENENQ9NZ42 101 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 TAAR3PQ9P1P4 343 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 CEP250Q9BV73 2442 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 IGKV3D-15A0A087WSY6 115 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 IGHV1-69-2A0A0G2JMI3 117 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 RELBQ01201 579 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 NMSQ5H8A3 153 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 ZC2HC1AQ96GY0 325 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 TMEM56Q96MV1 263 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 TMEM56-RWDD3S4R434 201 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 TRGV5A0A0B4J1U4 118 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 IGKV1-12A0A0C4DH73 117 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 hCG_38984A0A1B0GV85 526 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 SNURFLB1AK76 121 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 VENTXO95231 258 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 NAPSAO96009 420 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 IGKV1D-12P01611 117 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 ZNF818PQ6ZRF7 136 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 OR56B2PQ8NGI1 322 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 SPSB1Q96BD6 273 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 GNB4Q9HAV0 340 aa11.75□□□□□ -0.53
LIG1-203ENST00000536218 MRPS16Q9Y3D3 137 aaKnown RBP11.75□□□□□ -0.53
LIG1-203ENST00000536218 PRR14LQ5THK1 2151 aa11.74□□□□□ -0.53
LIG1-203ENST00000536218 A0A0G2JRQ6 117 aa11.74□□□□□ -0.53
LIG1-203ENST00000536218 C3orf79P0CE67 100 aa11.74□□□□□ -0.53
LIG1-203ENST00000536218 WT1P19544 449 aaPredicted RBP11.74□□□□□ -0.53
LIG1-203ENST00000536218 FAM58AQ8N1B3 248 aa11.74□□□□□ -0.53
LIG1-203ENST00000536218 FDCSPQ8NFU4 85 aa11.74□□□□□ -0.53
LIG1-203ENST00000536218 OR51H1Q8NH63 302 aa11.74□□□□□ -0.53
LIG1-203ENST00000536218 C10orf35Q96D05 121 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms