RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 C9orf66Q5T8R8 295 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 CNIH2Q6PI25 160 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 SSX9Q7RTT3 188 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 HOGA1Q86XE5 327 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 ZNF645Q8N7E2 425 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 POC5Q8NA72 575 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 ADAD2Q8NCV1 583 aaKnown RBP7.37□□□□□ -1.23
SSBP3-215ENST00000533946 BEST4Q8NFU0 473 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 SECTM1Q8WVN6 248 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 DPF1Q92782 380 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 RNF5Q99942 180 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 DMRT1Q9Y5R6 373 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 SULT1C2O00338 296 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 SAP30O75446 220 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 SPDEFO95238 335 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 PMP2P02689 132 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 REG1AP05451 166 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 AREGP15514 252 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 FXYD4P59646 89 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 ACSM6Q6P461 480 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 ZNF818PQ6ZRF7 136 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 LYSMD2Q8IV50 215 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 MFSD4AQ8N468 514 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 SAMD12Q8N8I0 201 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 SRSF12Q8WXF0 261 aaKnown RBP7.36□□□□□ -1.23
SSBP3-215ENST00000533946 ACOT12Q8WYK0 555 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 B9D2Q9BPU9 175 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 MCRIP2Q9BUT9 160 aaKnown RBP7.36□□□□□ -1.23
SSBP3-215ENST00000533946 FUNDC2Q9BWH2 189 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 GHITMQ9H3K2 345 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 AKIP1Q9NQ31 210 aa7.36□□□□□ -1.23
SSBP3-215ENST00000533946 RYR2Q92736 4967 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 PPP5D1E7EU14 171 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 LY86O95711 162 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 HSPB1P04792 205 aaKnown RBP7.35□□□□□ -1.23
SSBP3-215ENST00000533946 OR8U8P0C7N1 319 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 LGALS7P47929 136 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 SYNJ2BPP57105 145 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 TAS2R20P59543 309 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 CD69Q07108 199 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 TMEM267Q0VDI3 215 aaPredicted RBP7.35□□□□□ -1.23
SSBP3-215ENST00000533946 PLECQ15149 4684 aaKnown RBP7.35□□□□□ -1.23
SSBP3-215ENST00000533946 RNASE12Q5GAN4 147 aaKnown RBP7.35□□□□□ -1.23
SSBP3-215ENST00000533946 KCTD9Q7L273 389 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 SBSPONQ8IVN8 264 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 PUSL1Q8N0Z8 303 aaKnown RBP7.35□□□□□ -1.23
SSBP3-215ENST00000533946 Q8N1Y9 231 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 OR13F1Q8NGS4 319 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 TCTEX1D2Q8WW35 142 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 DCUN1D5Q9BTE7 237 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 DCSTAMPQ9H295 470 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 GAR1Q9NY12 217 aaKnown RBP7.35□□□□□ -1.23
SSBP3-215ENST00000533946 COA4Q9NYJ1 87 aa7.35□□□□□ -1.23
SSBP3-215ENST00000533946 ZNF256Q9Y2P7 627 aaPredicted RBP7.35□□□□□ -1.23
SSBP3-215ENST00000533946 TENM2Q9NT68 2774 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 BMPR1BO00238 502 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 XRCC3O43542 346 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 HPGDSO60760 199 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 OR2J3O76001 311 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 NDUFB8O95169 186 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 DIRAS3O95661 229 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 PPYP01298 95 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 ELK1P19419 428 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 GNRHRP30968 328 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 RHOGP84095 191 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 KLF5Q13887 457 aaPredicted RBP7.34□□□□□ -1.23
SSBP3-215ENST00000533946 RTL8BQ17RB0 113 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 VAX1Q5SQQ9 334 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 TMEM17Q86X19 198 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 TEX45Q8NA69 505 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 OR10W1Q8NGF6 305 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 FANCD2OSQ96PS1 177 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 FYTTD1Q96QD9 318 aaKnown RBP7.34□□□□□ -1.23
SSBP3-215ENST00000533946 PHB2Q99623 299 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 SLC5A7Q9GZV3 580 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 FXYD6Q9H0Q3 95 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 ZC4H2Q9NQZ6 224 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 COMMD3Q9UBI1 195 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 ANAPC10Q9UM13 185 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 ETV7Q9Y603 341 aa7.34□□□□□ -1.23
SSBP3-215ENST00000533946 A0A087WXM4 84 aa7.33□□□□□ -1.24
SSBP3-215ENST00000533946 DBX1A6NMT0 343 aa7.33□□□□□ -1.24
SSBP3-215ENST00000533946 S1PR2O95136 353 aa7.33□□□□□ -1.24
SSBP3-215ENST00000533946 CSN3P07498 182 aa7.33□□□□□ -1.24
SSBP3-215ENST00000533946 OR9G9P0C7N8 305 aa7.33□□□□□ -1.24
SSBP3-215ENST00000533946 HLA-DMAP28067 261 aa7.33□□□□□ -1.24
SSBP3-215ENST00000533946 CDK10Q15131 360 aa7.33□□□□□ -1.24
SSBP3-215ENST00000533946 CTF1Q16619 201 aa7.33□□□□□ -1.24
SSBP3-215ENST00000533946 VMA21Q3ZAQ7 101 aa7.33□□□□□ -1.24
SSBP3-215ENST00000533946 ZNF343Q6P1L6 599 aa7.33□□□□□ -1.24
SSBP3-215ENST00000533946 OR51H1Q8NH63 302 aa7.33□□□□□ -1.24
SSBP3-215ENST00000533946 CACNG8Q8WXS5 425 aa7.33□□□□□ -1.24
SSBP3-215ENST00000533946 SLC25A46Q96AG3 418 aa7.33□□□□□ -1.24
SSBP3-215ENST00000533946 TRBV9A0A0B4J1U6 114 aa7.32□□□□□ -1.24
SSBP3-215ENST00000533946 C13orf42A0A1B0GVH6 325 aa7.32□□□□□ -1.24
SSBP3-215ENST00000533946 KBTBD11O94819 623 aa7.32□□□□□ -1.24
SSBP3-215ENST00000533946 IGLV1-51P01701 117 aa7.32□□□□□ -1.24
SSBP3-215ENST00000533946 FRMD6-AS1P0C7T7 363 aa7.32□□□□□ -1.24
SSBP3-215ENST00000533946 GP9P14770 177 aa7.32□□□□□ -1.24
SSBP3-215ENST00000533946 MFAP2P55001 183 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms