RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 TAS2R20P59543 309 aa25.51■■□□□ 1.67
SSSCA1-205ENST00000527920 NCS1P62166 190 aa25.51■■□□□ 1.67
SSSCA1-205ENST00000527920 MMD2Q8IY49 270 aa25.51■■□□□ 1.67
SSSCA1-205ENST00000527920 MFSD4AQ8N468 514 aa25.51■■□□□ 1.67
SSSCA1-205ENST00000527920 OR5T1Q8NG75 326 aa25.51■■□□□ 1.67
SSSCA1-205ENST00000527920 GIMAP1Q8WWP7 306 aa25.51■■□□□ 1.67
SSSCA1-205ENST00000527920 DCUN1D4Q92564 292 aa25.51■■□□□ 1.67
SSSCA1-205ENST00000527920 CMTM3Q96MX0 182 aa25.51■■□□□ 1.67
SSSCA1-205ENST00000527920 DCUN1D5Q9BTE7 237 aa25.51■■□□□ 1.67
SSSCA1-205ENST00000527920 ZNF430Q9H8G1 570 aaPredicted RBP25.51■■□□□ 1.67
SSSCA1-205ENST00000527920 ZNF355PQ9NSJ1 428 aa25.51■■□□□ 1.67
SSSCA1-205ENST00000527920 IGHV4OR15-8A0A075B7B6 117 aa25.5■■□□□ 1.67
SSSCA1-205ENST00000527920 A0A087WW49 117 aa25.5■■□□□ 1.67
SSSCA1-205ENST00000527920 IGHV3-11P01762 117 aa25.5■■□□□ 1.67
SSSCA1-205ENST00000527920 KIR2DS2P43631 304 aa25.5■■□□□ 1.67
SSSCA1-205ENST00000527920 TNXAQ16473 311 aa25.5■■□□□ 1.67
SSSCA1-205ENST00000527920 VSTM2AQ8TAG5 236 aa25.5■■□□□ 1.67
SSSCA1-205ENST00000527920 SECTM1Q8WVN6 248 aa25.5■■□□□ 1.67
SSSCA1-205ENST00000527920 SRSF12Q8WXF0 261 aaKnown RBP25.5■■□□□ 1.67
SSSCA1-205ENST00000527920 TINAGL1Q9GZM7 467 aaPredicted RBP25.5■■□□□ 1.67
SSSCA1-205ENST00000527920 IFT46Q9NQC8 304 aa25.5■■□□□ 1.67
SSSCA1-205ENST00000527920 TAS2R8Q9NYW2 309 aa25.5■■□□□ 1.67
SSSCA1-205ENST00000527920 MSGN1A6NI15 193 aa25.49■■□□□ 1.67
SSSCA1-205ENST00000527920 DEFB121Q5J5C9 76 aa25.49■■□□□ 1.67
SSSCA1-205ENST00000527920 OR2B11Q5JQS5 317 aa25.49■■□□□ 1.67
SSSCA1-205ENST00000527920 ZNF429Q86V71 674 aa25.49■■□□□ 1.67
SSSCA1-205ENST00000527920 DLX4Q92988 240 aaPredicted RBP25.49■■□□□ 1.67
SSSCA1-205ENST00000527920 ACTL6BO94805 426 aa25.48■■□□□ 1.67
SSSCA1-205ENST00000527920 SMIM18P0DKX4 95 aa25.48■■□□□ 1.67
SSSCA1-205ENST00000527920 BRWD1-AS2P59051 145 aa25.48■■□□□ 1.67
SSSCA1-205ENST00000527920 VBP1P61758 197 aa25.48■■□□□ 1.67
SSSCA1-205ENST00000527920 ACOT12Q8WYK0 555 aa25.48■■□□□ 1.67
SSSCA1-205ENST00000527920 PHB2Q99623 299 aa25.48■■□□□ 1.67
SSSCA1-205ENST00000527920 SPIN2AQ99865 258 aa25.48■■□□□ 1.67
SSSCA1-205ENST00000527920 SPIN2BQ9BPZ2 258 aa25.48■■□□□ 1.67
SSSCA1-205ENST00000527920 CCL28Q9NRJ3 127 aa25.48■■□□□ 1.67
SSSCA1-205ENST00000527920 C13orf42A0A1B0GVH6 325 aa25.47■■□□□ 1.67
SSSCA1-205ENST00000527920 APOA1P02647 267 aa25.47■■□□□ 1.67
SSSCA1-205ENST00000527920 NAT1P18440 290 aa25.47■■□□□ 1.67
SSSCA1-205ENST00000527920 SLURP1P55000 103 aa25.47■■□□□ 1.67
SSSCA1-205ENST00000527920 ADAD2Q8NCV1 583 aaKnown RBP25.47■■□□□ 1.67
SSSCA1-205ENST00000527920 RBFOX2O43251 390 aaKnown RBP eCLIP25.46■■□□□ 1.672e-9■■■□□ 17.9
SSSCA1-205ENST00000527920 OR9G9P0C7N8 305 aa25.46■■□□□ 1.67
SSSCA1-205ENST00000527920 PUSL1Q8N0Z8 303 aaKnown RBP25.46■■□□□ 1.67
SSSCA1-205ENST00000527920 BORCS5Q969J3 196 aa25.46■■□□□ 1.67
SSSCA1-205ENST00000527920 SLC5A7Q9GZV3 580 aa25.46■■□□□ 1.67
SSSCA1-205ENST00000527920 MEIS3P1A6NDR6 274 aa25.45■■□□□ 1.66
SSSCA1-205ENST00000527920 OR2A4O95047 310 aa25.45■■□□□ 1.66
SSSCA1-205ENST00000527920 FCER2P06734 321 aa25.45■■□□□ 1.66
SSSCA1-205ENST00000527920 PRSS3P35030 304 aa25.45■■□□□ 1.66
SSSCA1-205ENST00000527920 ANKRD13BQ86YJ7 626 aa25.45■■□□□ 1.66
SSSCA1-205ENST00000527920 USMG5Q96IX5 58 aa25.45■■□□□ 1.66
SSSCA1-205ENST00000527920 OR2A7Q96R45 310 aa25.45■■□□□ 1.66
SSSCA1-205ENST00000527920 RANGRFQ9HD47 186 aaPredicted RBP25.45■■□□□ 1.66
SSSCA1-205ENST00000527920 COA4Q9NYJ1 87 aa25.45■■□□□ 1.66
SSSCA1-205ENST00000527920 KBTBD11O94819 623 aa25.44■■□□□ 1.66
SSSCA1-205ENST00000527920 GABARAPO95166 117 aa25.44■■□□□ 1.66
SSSCA1-205ENST00000527920 HRASP01112 189 aa25.44■■□□□ 1.66
SSSCA1-205ENST00000527920 EIF4EP06730 217 aaKnown RBP25.44■■□□□ 1.66
SSSCA1-205ENST00000527920 ECI1P42126 302 aa25.44■■□□□ 1.66
SSSCA1-205ENST00000527920 TAS2R46P59540 309 aa25.44■■□□□ 1.66
SSSCA1-205ENST00000527920 DHRS11Q6UWP2 260 aa25.44■■□□□ 1.66
SSSCA1-205ENST00000527920 TMEM167AQ8TBQ9 72 aa25.44■■□□□ 1.66
SSSCA1-205ENST00000527920 AIFM2Q9BRQ8 373 aa25.44■■□□□ 1.66
SSSCA1-205ENST00000527920 COMMD3Q9UBI1 195 aa25.44■■□□□ 1.66
SSSCA1-205ENST00000527920 CATR1Q13166 79 aa25.43■■□□□ 1.66
SSSCA1-205ENST00000527920 DYRK1AQ13627 763 aa25.43■■□□□ 1.66
SSSCA1-205ENST00000527920 ACSM6Q6P461 480 aa25.43■■□□□ 1.66
SSSCA1-205ENST00000527920 VKORC1L1Q8N0U8 176 aa25.43■■□□□ 1.66
SSSCA1-205ENST00000527920 EHFQ9NZC4 300 aa25.43■■□□□ 1.66
SSSCA1-205ENST00000527920 ZNF256Q9Y2P7 627 aaPredicted RBP25.43■■□□□ 1.66
SSSCA1-205ENST00000527920 MPPED1O15442 326 aa25.42■■□□□ 1.66
SSSCA1-205ENST00000527920 ZP3P21754 424 aa25.42■■□□□ 1.66
SSSCA1-205ENST00000527920 MAS1LP35410 378 aa25.42■■□□□ 1.66
SSSCA1-205ENST00000527920 RORCP51449 518 aa25.42■■□□□ 1.66
SSSCA1-205ENST00000527920 FXYD4P59646 89 aa25.42■■□□□ 1.66
SSSCA1-205ENST00000527920 HERV-K104P61576 105 aa25.42■■□□□ 1.66
SSSCA1-205ENST00000527920 CTF1Q16619 201 aa25.42■■□□□ 1.66
SSSCA1-205ENST00000527920 GPHA2Q96T91 129 aa25.42■■□□□ 1.66
SSSCA1-205ENST00000527920 B9D2Q9BPU9 175 aa25.42■■□□□ 1.66
SSSCA1-205ENST00000527920 SMIM31A0A1B0GVY4 71 aa25.41■■□□□ 1.66
SSSCA1-205ENST00000527920 TNFSF12O43508 249 aa25.41■■□□□ 1.66
SSSCA1-205ENST00000527920 ZNF343Q6P1L6 599 aa25.41■■□□□ 1.66
SSSCA1-205ENST00000527920 GPX8Q8TED1 209 aa25.41■■□□□ 1.66
SSSCA1-205ENST00000527920 SCPEP1Q9HB40 452 aa25.41■■□□□ 1.66
SSSCA1-205ENST00000527920 ADAM30Q9UKF2 790 aa25.41■■□□□ 1.66
SSSCA1-205ENST00000527920 APELAP0DMC3 54 aa25.4■■□□□ 1.66
SSSCA1-205ENST00000527920 C10orf55Q5SWW7 151 aa25.4■■□□□ 1.66
SSSCA1-205ENST00000527920 ZNF818PQ6ZRF7 136 aa25.4■■□□□ 1.66
SSSCA1-205ENST00000527920 SLC25A42Q86VD7 318 aa25.4■■□□□ 1.66
SSSCA1-205ENST00000527920 TMEM17Q86X19 198 aa25.4■■□□□ 1.66
SSSCA1-205ENST00000527920 SPAG16Q8N0X2 631 aa25.4■■□□□ 1.66
SSSCA1-205ENST00000527920 TTC9CQ8N5M4 171 aa25.4■■□□□ 1.66
SSSCA1-205ENST00000527920 OR5H2Q8NGV7 314 aa25.4■■□□□ 1.66
SSSCA1-205ENST00000527920 MOB3AQ96BX8 217 aa25.4■■□□□ 1.66
SSSCA1-205ENST00000527920 LSM4Q9Y4Z0 139 aaKnown RBP25.4■■□□□ 1.66
SSSCA1-205ENST00000527920 TRBV9A0A0B4J1U6 114 aa25.39■■□□□ 1.66
SSSCA1-205ENST00000527920 FAM223BA6NKX1 122 aa25.39■■□□□ 1.66
SSSCA1-205ENST00000527920 SAP30O75446 220 aa25.39■■□□□ 1.66
SSSCA1-205ENST00000527920 FAM223AQ8IWN6 122 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms