RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 TMEM267Q0VDI3 215 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 TMEM249Q2WGJ8 235 aa-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 C18orf21Q32NC0 220 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 LCN8Q6JVE9 175 aa-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 C1orf158Q8N1D5 194 aa-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 OR4C6Q8NH72 309 aa-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 AQP3Q92482 292 aa-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 TESCQ96BS2 214 aa-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 C12orf43Q96C57 262 aaKnown RBP-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 FAM210AQ96ND0 272 aa-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 RAB1BQ9H0U4 201 aa-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 OR5AC2Q9NZP5 309 aa-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 EMC3Q9P0I2 261 aa-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 NAT8Q9UHE5 227 aa-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 ZFP30Q9Y2G7 519 aa-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.12□□□□□ -2.43
SNORA40.9-201ENST00000515895 NUP160Q12769 1436 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 SIPA1L1O43166 1804 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 GREB1Q4ZG55 1949 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 ABCC12Q96J65 1359 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 TMEM212A6NML5 194 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 C9JCJ5 164 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 F5H5K5 113 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 GOLGA8RI6L899 631 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 LDOC1O95751 146 aaPredicted RBP-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 TFPTP0C1Z6 253 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 SFTPCP11686 197 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 TMEM33P57088 247 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 FKBP1AP62942 108 aaKnown RBP-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 RUNX1Q01196 453 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 SRSF6Q13247 344 aaKnown RBP-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 FAM27BQ5VT28 67 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 DHFR2Q86XF0 187 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 Q8WTZ3 238 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 ASB13Q8WXK3 278 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 TLCD1Q96CP7 247 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 TMEM56Q96MV1 263 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 YIPF3Q9GZM5 350 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 BDP1A6H8Y1 2624 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 HEATR5AQ86XA9 2040 aa-0.13□□□□□ -2.43
SNORA40.9-201ENST00000515895 TNRC6AQ8NDV7 1962 aaKnown RBP-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 KIAA0232Q92628 1395 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 IRGMA1A4Y4 181 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 C19orf84I3L1E1 186 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 SGCEO43556 437 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 CST4P01036 141 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 KRTAP2-3P0C7H8 128 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 MSNP26038 577 aaKnown RBP-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 RAB8AP61006 207 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 C17orf78Q8N4C9 275 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 CCDC12Q8WUD4 166 aaPredicted RBP-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 ACOT12Q8WYK0 555 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 RORBQ92753 470 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 LRRC45Q96CN5 670 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 SMIM12Q96EX1 92 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 BCL7BQ9BQE9 202 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 KRTAP2-4Q9BYR9 128 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 KRTAP2-1Q9BYU5 128 aa-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 ASH1LQ9NR48 2969 aaKnown RBP-0.14□□□□□ -2.43
SNORA40.9-201ENST00000515895 TRBV10-2A0A0K0K1G8 114 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 A0A1B0GW54 56 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 A0A1W2PPM0 123 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 TRAPPC2LH3BP13 241 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 OR2T1O43869 369 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 CSTAP01040 98 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 SHBGP04278 402 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 CCL5P13501 91 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 CFL1P23528 166 aaKnown RBP-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 DLX6P56179 175 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 H2BFSP57053 126 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 GNA13Q14344 377 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 ZNF345Q14585 488 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 NDUFA5Q16718 116 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 PDPK2PQ6A1A2 396 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 GPHB5Q86YW7 130 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 ST13P4Q8IZP2 240 aaPredicted RBP-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 LRRC39Q96DD0 335 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 AMELYQ99218 206 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 TMEM208Q9BTX3 173 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 PRRG3Q9BZD7 231 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 ZNHIT6Q9NWK9 470 aaKnown RBP-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 CD300AQ9UGN4 299 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 ENPP5Q9UJA9 477 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 TNCP24821 2201 aa-0.15□□□□□ -2.43
SNORA40.9-201ENST00000515895 KIF24Q5T7B8 1368 aa-0.16□□□□□ -2.43
SNORA40.9-201ENST00000515895 THSD7AQ9UPZ6 1657 aa-0.16□□□□□ -2.44
SNORA40.9-201ENST00000515895 TMEM269A0A1B0GVZ9 245 aa-0.16□□□□□ -2.44
SNORA40.9-201ENST00000515895 SULT1C2O00338 296 aa-0.16□□□□□ -2.44
SNORA40.9-201ENST00000515895 SYNGR1O43759 233 aa-0.16□□□□□ -2.44
SNORA40.9-201ENST00000515895 PMP2P02689 132 aa-0.16□□□□□ -2.44
SNORA40.9-201ENST00000515895 HLA-DQB2P05538 268 aa-0.16□□□□□ -2.44
SNORA40.9-201ENST00000515895 TPM2P07951 284 aa-0.16□□□□□ -2.44
SNORA40.9-201ENST00000515895 MSMBP08118 114 aa-0.16□□□□□ -2.44
SNORA40.9-201ENST00000515895 F8A1P23610 371 aa-0.16□□□□□ -2.44
SNORA40.9-201ENST00000515895 ZNF93P35789 620 aaPredicted RBP-0.16□□□□□ -2.44
SNORA40.9-201ENST00000515895 UBE2IP63279 158 aaKnown RBP-0.16□□□□□ -2.44
SNORA40.9-201ENST00000515895 MGAT3Q09327 533 aa-0.16□□□□□ -2.44
SNORA40.9-201ENST00000515895 ZNF846Q147U1 533 aa-0.16□□□□□ -2.44
SNORA40.9-201ENST00000515895 OR4D1Q15615 310 aa-0.16□□□□□ -2.44
SNORA40.9-201ENST00000515895 CLEC12BQ2HXU8 276 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms