RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 PALMDQ9NP74 551 aa11.81□□□□□ -0.52
RNF4-213ENST00000509388 COMMD9Q9P000 198 aa11.81□□□□□ -0.52
RNF4-213ENST00000509388 NIPBLQ6KC79 2804 aaeCLIP11.8□□□□□ -0.52
RNF4-213ENST00000509388 SH2D7A6NKC9 451 aaPredicted RBP11.8□□□□□ -0.52
RNF4-213ENST00000509388 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
RNF4-213ENST00000509388 CREBL2O60519 120 aaPredicted RBP11.8□□□□□ -0.52
RNF4-213ENST00000509388 S1PR2O95136 353 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 NDUFA3O95167 84 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 OR5AC1P0C628 307 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 RPA2P15927 270 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 VAMP1P23763 118 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 RAG2P55895 527 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 UBE2KP61086 200 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 DCTN2Q13561 401 aaKnown RBP11.8□□□□□ -0.52
RNF4-213ENST00000509388 SSX9Q7RTT3 188 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 VKORC1L1Q8N0U8 176 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 FAM71E2Q8N5Q1 922 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.8□□□□□ -0.52
RNF4-213ENST00000509388 TEX45Q8NA69 505 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 OR4F5Q8NH21 305 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 OR2T6Q8NHC8 308 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 TMEM158Q8WZ71 300 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 TMEM230Q96A57 120 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 R3HDM4Q96D70 268 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 RHOVQ96L33 236 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 TP53RKQ96S44 253 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 C20orf85Q9H1P6 137 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 FLVCR2Q9UPI3 526 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 NUBP2Q9Y5Y2 271 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 JMJD1CQ15652 2540 aa11.8□□□□□ -0.52
RNF4-213ENST00000509388 TRAV6A0A075B6T7 132 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 ACTL6BO94805 426 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 OR2A4O95047 310 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 KRASP01116 189 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 H2AFB2P0C5Z0 115 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 VSIG10L2P0DP72 767 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 HKR1P10072 659 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 UBE2MP61081 183 aaKnown RBP11.79□□□□□ -0.52
RNF4-213ENST00000509388 C4orf46Q504U0 113 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 ZNF585BQ52M93 769 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 PLET1Q6UQ28 207 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 Q6ZSV7 163 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 SLC25A42Q86VD7 318 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 PPP1R27Q86WC6 154 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 ZNF695Q8IW36 515 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 RNASE11Q8TAA1 199 aaKnown RBP11.79□□□□□ -0.52
RNF4-213ENST00000509388 OR2A7Q96R45 310 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 NUDT15Q9NV35 164 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 SIGLEC9Q9Y336 463 aa11.79□□□□□ -0.52
RNF4-213ENST00000509388 PIGBOS1A0A0B4J2F0 54 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 KCNAB3O43448 404 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 TSPAN9O75954 239 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 NDUFA7O95182 113 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 CNIH1O95406 144 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 IGLV2-23P01705 113 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 AMY1AP04745 511 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 SAA1P0DJI8 122 aaPredicted RBP11.78□□□□□ -0.52
RNF4-213ENST00000509388 UCP1P25874 307 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 RAB25P57735 213 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 GNB1P62873 340 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 NRARPQ7Z6K4 114 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 SLC35E3Q7Z769 313 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 FOXRED2Q8IWF2 684 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 ABHD5Q8WTS1 349 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 TAF15Q92804 592 aaKnown RBP eCLIP11.78□□□□□ -0.526e-6■■■■□ 22
RNF4-213ENST00000509388 GALNT14Q96FL9 552 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 TMEM222Q9H0R3 208 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 BEX1Q9HBH7 125 aa11.78□□□□□ -0.52
RNF4-213ENST00000509388 SETD2Q9BYW2 2564 aaPredicted RBP11.78□□□□□ -0.52
RNF4-213ENST00000509388 MARCH11A6NNE9 402 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 SFT2D2O95562 160 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 HLA-DRB1P01911 266 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 OR4E1P0C645 316 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 ANXA7P20073 488 aaKnown RBP11.77□□□□□ -0.53
RNF4-213ENST00000509388 G6PCP35575 357 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 VDAC2P45880 294 aaPredicted RBP11.77□□□□□ -0.53
RNF4-213ENST00000509388 AKR1C2P52895 323 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 SRPXP78539 464 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 RELBQ01201 579 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 FOXL1Q12952 345 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 PPP1R1AQ13522 171 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 KRTAP24-1Q3LI83 254 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 OR4A47Q6IF82 309 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 H2BFWTQ7Z2G1 175 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 MMD2Q8IY49 270 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 LGI3Q8N145 548 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 OR4A5Q8NH83 315 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 CASTOR1Q8WTX7 329 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 GLYATL2Q8WU03 294 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 RRNAD1Q96FB5 475 aaKnown RBP11.77□□□□□ -0.53
RNF4-213ENST00000509388 ZNF702PQ9H963 129 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 TMEM140Q9NV12 185 aa11.77□□□□□ -0.53
RNF4-213ENST00000509388 A0A1B0GUS0 222 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 FCN1O00602 326 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 SNAPC5O75971 98 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 KBTBD11O94819 623 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 CDS2O95674 445 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 CA2P00918 260 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 HLA-AP01891 365 aaKnown RBP11.76□□□□□ -0.53
RNF4-213ENST00000509388 CRYGBP07316 175 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms