RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ADAM30Q9UKF2 790 aa12.47□□□□□ -0.41
SCLT1-204ENST00000503215 STUB1Q9UNE7 303 aa12.47□□□□□ -0.41
SCLT1-204ENST00000503215 STAB2Q8WWQ8 2551 aa12.47□□□□□ -0.41
SCLT1-204ENST00000503215 IGKV1D-13A0A0B4J2D9 117 aa12.46□□□□□ -0.41
SCLT1-204ENST00000503215 MSGN1A6NI15 193 aa12.46□□□□□ -0.41
SCLT1-204ENST00000503215 SSX5O60225 188 aa12.46□□□□□ -0.41
SCLT1-204ENST00000503215 TRBV12-3P01733 135 aa12.46□□□□□ -0.41
SCLT1-204ENST00000503215 IGKV1-13P0DP09 117 aa12.46□□□□□ -0.41
SCLT1-204ENST00000503215 DTYMKP23919 212 aa12.46□□□□□ -0.41
SCLT1-204ENST00000503215 RTL8BQ17RB0 113 aa12.46□□□□□ -0.41
SCLT1-204ENST00000503215 HACD4Q5VWC8 232 aa12.46□□□□□ -0.41
SCLT1-204ENST00000503215 SBSPONQ8IVN8 264 aa12.46□□□□□ -0.41
SCLT1-204ENST00000503215 LGALS14Q8TCE9 139 aa12.46□□□□□ -0.41
SCLT1-204ENST00000503215 SMAD5-AS1Q9Y6J3 95 aa12.46□□□□□ -0.41
SCLT1-204ENST00000503215 HUWE1Q7Z6Z7 4374 aaKnown RBP12.46□□□□□ -0.41
SCLT1-204ENST00000503215 C13orf42A0A1B0GVH6 325 aa12.45□□□□□ -0.42
SCLT1-204ENST00000503215 GABARAPO95166 117 aa12.45□□□□□ -0.42
SCLT1-204ENST00000503215 IGLV2-14P01704 120 aa12.45□□□□□ -0.42
SCLT1-204ENST00000503215 GP9P14770 177 aa12.45□□□□□ -0.42
SCLT1-204ENST00000503215 SDC2P34741 201 aa12.45□□□□□ -0.42
SCLT1-204ENST00000503215 RPL30P62888 115 aaKnown RBP12.45□□□□□ -0.42
SCLT1-204ENST00000503215 PITPNAQ00169 270 aa12.45□□□□□ -0.42
SCLT1-204ENST00000503215 TAGLNQ01995 201 aaKnown RBP12.45□□□□□ -0.42
SCLT1-204ENST00000503215 SPCS2Q15005 226 aa12.45□□□□□ -0.42
SCLT1-204ENST00000503215 NEDD8Q15843 81 aa12.45□□□□□ -0.42
SCLT1-204ENST00000503215 PRSS8Q16651 343 aa12.45□□□□□ -0.42
SCLT1-204ENST00000503215 OR2B11Q5JQS5 317 aa12.45□□□□□ -0.42
SCLT1-204ENST00000503215 OR5H6Q8NGV6 325 aa12.45□□□□□ -0.42
SCLT1-204ENST00000503215 PTHLHP12272 177 aa12.44□□□□□ -0.42
SCLT1-204ENST00000503215 UBE2KP61086 200 aa12.44□□□□□ -0.42
SCLT1-204ENST00000503215 MXD1Q05195 221 aa12.44□□□□□ -0.42
SCLT1-204ENST00000503215 DYRK1AQ13627 763 aa12.44□□□□□ -0.42
SCLT1-204ENST00000503215 C10orf55Q5SWW7 151 aa12.44□□□□□ -0.42
SCLT1-204ENST00000503215 SFXN4Q6P4A7 337 aa12.44□□□□□ -0.42
SCLT1-204ENST00000503215 CADM3Q8N126 398 aa12.44□□□□□ -0.42
SCLT1-204ENST00000503215 TEX45Q8NA69 505 aa12.44□□□□□ -0.42
SCLT1-204ENST00000503215 OR4C12Q96R67 309 aa12.44□□□□□ -0.42
SCLT1-204ENST00000503215 GPHA2Q96T91 129 aa12.44□□□□□ -0.42
SCLT1-204ENST00000503215 TINAGL1Q9GZM7 467 aaPredicted RBP12.44□□□□□ -0.42
SCLT1-204ENST00000503215 SSR3Q9UNL2 185 aa12.44□□□□□ -0.42
SCLT1-204ENST00000503215 H3BUA1 57 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 FCGR3BO75015 233 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 PRH1P02810 166 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 RRASP10301 218 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 PPP5CP53041 499 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 KLF5Q13887 457 aaPredicted RBP12.43□□□□□ -0.42
SCLT1-204ENST00000503215 TNXAQ16473 311 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 IL34Q6ZMJ4 242 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 TPRA1Q86W33 373 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 ADAD2Q8NCV1 583 aaKnown RBP12.43□□□□□ -0.42
SCLT1-204ENST00000503215 FCGR1BQ92637 280 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 SLC25A38Q96DW6 304 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 ADTRPQ96IZ2 230 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 FUNDC2Q9BWH2 189 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 ZNF430Q9H8G1 570 aaPredicted RBP12.43□□□□□ -0.42
SCLT1-204ENST00000503215 RANGRFQ9HD47 186 aaPredicted RBP12.43□□□□□ -0.42
SCLT1-204ENST00000503215 COA4Q9NYJ1 87 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 OR2W1Q9Y3N9 320 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 TUSC2O75896 110 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 HLA-DQB1P01920 261 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 FRMD6-AS1P0C7T7 363 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 SAA1P0DJI8 122 aaPredicted RBP12.43□□□□□ -0.42
SCLT1-204ENST00000503215 BRWD1-AS2P59051 145 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 VMA21Q3ZAQ7 101 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 VKORC1L1Q8N0U8 176 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 ZNF645Q8N7E2 425 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 OR6Q1Q8NGQ2 317 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 SRSF12Q8WXF0 261 aaKnown RBP12.43□□□□□ -0.42
SCLT1-204ENST00000503215 PHB2Q99623 299 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 RSRP1Q9BUV0 290 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 NAA50Q9GZZ1 169 aaKnown RBP12.43□□□□□ -0.42
SCLT1-204ENST00000503215 DCSTAMPQ9H295 470 aa12.43□□□□□ -0.42
SCLT1-204ENST00000503215 RBMX2Q9Y388 322 aaKnown RBP12.43□□□□□ -0.42
SCLT1-204ENST00000503215 LOC100506127A0A0U1RQW1 187 aa12.42□□□□□ -0.42
SCLT1-204ENST00000503215 IGLV1-51P01701 117 aa12.42□□□□□ -0.42
SCLT1-204ENST00000503215 FCER2P06734 321 aa12.42□□□□□ -0.42
SCLT1-204ENST00000503215 SYNJ2BPP57105 145 aa12.42□□□□□ -0.42
SCLT1-204ENST00000503215 GNG2P59768 71 aa12.42□□□□□ -0.42
SCLT1-204ENST00000503215 ZNF45Q02386 682 aa12.42□□□□□ -0.42
SCLT1-204ENST00000503215 EIF4EBP1Q13541 118 aaPredicted RBP12.42□□□□□ -0.42
SCLT1-204ENST00000503215 ARL6IP1Q15041 203 aa12.42□□□□□ -0.42
SCLT1-204ENST00000503215 CTF1Q16619 201 aa12.42□□□□□ -0.42
SCLT1-204ENST00000503215 ZNF343Q6P1L6 599 aa12.42□□□□□ -0.42
SCLT1-204ENST00000503215 CNIH2Q6PI25 160 aa12.42□□□□□ -0.42
SCLT1-204ENST00000503215 Q8N1Y9 231 aa12.42□□□□□ -0.42
SCLT1-204ENST00000503215 ACOT12Q8WYK0 555 aa12.42□□□□□ -0.42
SCLT1-204ENST00000503215 TMEM68Q96MH6 324 aa12.42□□□□□ -0.42
SCLT1-204ENST00000503215 CENPOQ9BU64 300 aa12.42□□□□□ -0.42
SCLT1-204ENST00000503215 TRAV18A0A075B6X5 111 aa12.41□□□□□ -0.42
SCLT1-204ENST00000503215 A0A0G2JLM5 398 aa12.41□□□□□ -0.42
SCLT1-204ENST00000503215 BRI3O95415 125 aa12.41□□□□□ -0.42
SCLT1-204ENST00000503215 PTTG1O95997 202 aa12.41□□□□□ -0.42
SCLT1-204ENST00000503215 OR9G9P0C7N8 305 aa12.41□□□□□ -0.42
SCLT1-204ENST00000503215 ZP3P21754 424 aa12.41□□□□□ -0.42
SCLT1-204ENST00000503215 IDNKQ5T6J7 187 aa12.41□□□□□ -0.42
SCLT1-204ENST00000503215 C19orf35Q6ZS72 473 aa12.41□□□□□ -0.42
SCLT1-204ENST00000503215 MFSD4AQ8N468 514 aa12.41□□□□□ -0.42
SCLT1-204ENST00000503215 GVQW1Q8N7I0 195 aa12.41□□□□□ -0.42
SCLT1-204ENST00000503215 OSR1Q8TAX0 266 aaPredicted RBP12.41□□□□□ -0.42
SCLT1-204ENST00000503215 ELOVL1Q9BW60 279 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms