RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 CTXN2P0C2S0 81 aa13.08□□□□□ -0.32
SMC4-226ENST00000497311 OR9G9P0C7N8 305 aa13.08□□□□□ -0.32
SMC4-226ENST00000497311 LYL1P12980 280 aa13.08□□□□□ -0.32
SMC4-226ENST00000497311 CD36P16671 472 aa13.08□□□□□ -0.32
SMC4-226ENST00000497311 ZNF645Q8N7E2 425 aa13.08□□□□□ -0.32
SMC4-226ENST00000497311 SNAPC3Q92966 411 aa13.08□□□□□ -0.32
SMC4-226ENST00000497311 CITED4Q96RK1 184 aa13.08□□□□□ -0.32
SMC4-226ENST00000497311 DCUN1D5Q9BTE7 237 aa13.08□□□□□ -0.32
SMC4-226ENST00000497311 ST6GALNAC5Q9BVH7 336 aa13.08□□□□□ -0.32
SMC4-226ENST00000497311 NOTOA8MTQ0 251 aa13.07□□□□□ -0.32
SMC4-226ENST00000497311 CREBL2O60519 120 aaPredicted RBP13.07□□□□□ -0.32
SMC4-226ENST00000497311 ACTL6BO94805 426 aa13.07□□□□□ -0.32
SMC4-226ENST00000497311 CDK10Q15131 360 aa13.07□□□□□ -0.32
SMC4-226ENST00000497311 ZNF430Q9H8G1 570 aaPredicted RBP13.07□□□□□ -0.32
SMC4-226ENST00000497311 VCX3AQ9NNX9 186 aa13.07□□□□□ -0.32
SMC4-226ENST00000497311 PALMDQ9NP74 551 aa13.07□□□□□ -0.32
SMC4-226ENST00000497311 SIGLEC8Q9NYZ4 499 aa13.07□□□□□ -0.32
SMC4-226ENST00000497311 ADAM30Q9UKF2 790 aa13.07□□□□□ -0.32
SMC4-226ENST00000497311 PRELID3BQ9Y3B1 194 aa13.07□□□□□ -0.32
SMC4-226ENST00000497311 SMIM30A4D0T7 59 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 FAM223BA6NKX1 122 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 FCGR3BO75015 233 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 RBMXL2O75526 392 aaKnown RBP13.06□□□□□ -0.32
SMC4-226ENST00000497311 SLC22A5O76082 557 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 OR2A4O95047 310 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 CSN3P07498 182 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 SAA1P0DJI8 122 aaPredicted RBP13.06□□□□□ -0.32
SMC4-226ENST00000497311 NFYAP23511 347 aaPredicted RBP13.06□□□□□ -0.32
SMC4-226ENST00000497311 HACD4Q5VWC8 232 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 LCN12Q6JVE5 192 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 KCTD9Q7L273 389 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 FAM223AQ8IWN6 122 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 MMD2Q8IY49 270 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 SPIN2AQ99865 258 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 SPIN2BQ9BPZ2 258 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 DCSTAMPQ9H295 470 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 AKIP1Q9NQ31 210 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 PEMTQ9UBM1 199 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 MRPS7Q9Y2R9 242 aaKnown RBP13.06□□□□□ -0.32
SMC4-226ENST00000497311 OR2W1Q9Y3N9 320 aa13.06□□□□□ -0.32
SMC4-226ENST00000497311 LOC100506127A0A0U1RQW1 187 aa13.05□□□□□ -0.32
SMC4-226ENST00000497311 TUSC2O75896 110 aa13.05□□□□□ -0.32
SMC4-226ENST00000497311 HLA-DQB1P01920 261 aa13.05□□□□□ -0.32
SMC4-226ENST00000497311 SDC2P34741 201 aa13.05□□□□□ -0.32
SMC4-226ENST00000497311 RHOGP84095 191 aa13.05□□□□□ -0.32
SMC4-226ENST00000497311 ATP5G2Q06055 141 aa13.05□□□□□ -0.32
SMC4-226ENST00000497311 GTSCR1Q86UQ5 136 aa13.05□□□□□ -0.32
SMC4-226ENST00000497311 Q8N402 240 aa13.05□□□□□ -0.32
SMC4-226ENST00000497311 RBMX2Q9Y388 322 aaKnown RBP13.05□□□□□ -0.32
SMC4-226ENST00000497311 TRBV9A0A0B4J1U6 114 aa13.04□□□□□ -0.32
SMC4-226ENST00000497311 SCGNO76038 276 aa13.04□□□□□ -0.32
SMC4-226ENST00000497311 PRH1P02810 166 aa13.04□□□□□ -0.32
SMC4-226ENST00000497311 EXOSC2Q13868 293 aaKnown RBP13.04□□□□□ -0.32
SMC4-226ENST00000497311 TIMM50Q3ZCQ8 353 aa13.04□□□□□ -0.32
SMC4-226ENST00000497311 SFXN4Q6P4A7 337 aa13.04□□□□□ -0.32
SMC4-226ENST00000497311 CNIH2Q6PI25 160 aa13.04□□□□□ -0.32
SMC4-226ENST00000497311 SLC25A42Q86VD7 318 aa13.04□□□□□ -0.32
SMC4-226ENST00000497311 TTC9CQ8N5M4 171 aa13.04□□□□□ -0.32
SMC4-226ENST00000497311 RNF167Q9H6Y7 350 aa13.04□□□□□ -0.32
SMC4-226ENST00000497311 TUBA4BQ9H853 241 aa13.04□□□□□ -0.32
SMC4-226ENST00000497311 DAPK2Q9UIK4 370 aa13.04□□□□□ -0.32
SMC4-226ENST00000497311 TMEM235A6NFC5 223 aa13.03□□□□□ -0.32
SMC4-226ENST00000497311 AIREO43918 545 aa13.03□□□□□ -0.32
SMC4-226ENST00000497311 GNG2P59768 71 aa13.03□□□□□ -0.32
SMC4-226ENST00000497311 RPL30P62888 115 aaKnown RBP13.03□□□□□ -0.32
SMC4-226ENST00000497311 ZNF45Q02386 682 aa13.03□□□□□ -0.32
SMC4-226ENST00000497311 OR2B11Q5JQS5 317 aa13.03□□□□□ -0.32
SMC4-226ENST00000497311 OR2K2Q8NGT1 345 aa13.03□□□□□ -0.32
SMC4-226ENST00000497311 NUDCD2Q8WVJ2 157 aa13.03□□□□□ -0.32
SMC4-226ENST00000497311 ISOC1Q96CN7 298 aa13.03□□□□□ -0.32
SMC4-226ENST00000497311 YIPF6Q96EC8 236 aa13.03□□□□□ -0.32
SMC4-226ENST00000497311 SPATA25Q9BR10 227 aa13.03□□□□□ -0.32
SMC4-226ENST00000497311 THAP7Q9BT49 309 aaPredicted RBP13.03□□□□□ -0.32
SMC4-226ENST00000497311 SACSQ9NZJ4 4579 aa13.03□□□□□ -0.32
SMC4-226ENST00000497311 IGKV1D-13A0A0B4J2D9 117 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 BMPR1BO00238 502 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 IGLV2-14P01704 120 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 CLEC2LP0C7M8 214 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 IGKV1-13P0DP09 117 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 MXD1Q05195 221 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 HAGHQ16775 308 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 C10orf55Q5SWW7 151 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 VKORC1L1Q8N0U8 176 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 NECAP1Q8NC96 275 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 OR4S2Q8NH73 311 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 VSTM2AQ8TAG5 236 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 TCTEX1D2Q8WW35 142 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 HSD17B10Q99714 261 aaKnown RBP13.02□□□□□ -0.33
SMC4-226ENST00000497311 ANXA10Q9UJ72 324 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 SPATA2Q9UM82 520 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 TENM2Q9NT68 2774 aa13.02□□□□□ -0.33
SMC4-226ENST00000497311 RYR2Q92736 4967 aa13.01□□□□□ -0.33
SMC4-226ENST00000497311 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.01□□□□□ -0.33
SMC4-226ENST00000497311 IZUMO1RA6ND01 250 aa13.01□□□□□ -0.33
SMC4-226ENST00000497311 OR2J3O76001 311 aa13.01□□□□□ -0.33
SMC4-226ENST00000497311 MECP2P51608 486 aaKnown RBP13.01□□□□□ -0.33
SMC4-226ENST00000497311 FAM209BQ5JX69 171 aa13.01□□□□□ -0.33
SMC4-226ENST00000497311 ZFAND6Q6FIF0 208 aa13.01□□□□□ -0.33
SMC4-226ENST00000497311 KCTD12Q96CX2 325 aaKnown RBP13.01□□□□□ -0.33
SMC4-226ENST00000497311 OR2A7Q96R45 310 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms