RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 OR4D10Q8NGI6 311 aa9.58□□□□□ -0.88
SMARCD3-213ENST00000489503 OR4S2Q8NH73 311 aa9.58□□□□□ -0.88
SMARCD3-213ENST00000489503 OR5B12Q96R08 314 aa9.58□□□□□ -0.88
SMARCD3-213ENST00000489503 GON7Q9BXV9 100 aa9.58□□□□□ -0.88
SMARCD3-213ENST00000489503 MTFP1Q9UDX5 166 aa9.58□□□□□ -0.88
SMARCD3-213ENST00000489503 RSL24D1Q9UHA3 163 aaKnown RBP9.58□□□□□ -0.88
SMARCD3-213ENST00000489503 ZNF580Q9UK33 172 aa9.58□□□□□ -0.88
SMARCD3-213ENST00000489503 NOTCH3Q9UM47 2321 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 G3V4G9 280 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 CNIH1O95406 144 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 CD3DP04234 171 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 ELANEP08246 267 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 RPA2P15927 270 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 CRIP2P52943 208 aaPredicted RBP9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 TSPAN5P62079 268 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 DEFA5Q01523 94 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 MSMO1Q15800 293 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 TNXAQ16473 311 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 PRSS8Q16651 343 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 PHLDA2Q53GA4 152 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 FAAP20Q6NZ36 180 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 DHRS11Q6UWP2 260 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 ZNF562Q6V9R5 426 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 ZNF695Q8IW36 515 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 SPAG16Q8N0X2 631 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 MINDY2Q8NBR6 621 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 OR6F1Q8NGZ6 308 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 OSR1Q8TAX0 266 aaPredicted RBP9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 NXF2Q9GZY0 626 aaKnown RBP9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 ZNF430Q9H8G1 570 aaPredicted RBP9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 GNB4Q9HAV0 340 aa9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 FOXA2Q9Y261 457 aaPredicted RBP9.57□□□□□ -0.88
SMARCD3-213ENST00000489503 GABARAPH6UMI1 98 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 S1PR2O95136 353 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 IGLV1-40P01703 118 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 MYOD1P15172 320 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 TNFSF8P32971 234 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 PPP5CP53041 499 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 CATR1Q13166 79 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 ACTBL2Q562R1 376 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 RNASE10Q5GAN6 216 aaKnown RBP9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 VAX1Q5SQQ9 334 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 ASPHD1Q5U4P2 390 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 PYHIN1Q6K0P9 492 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 RNF152Q8N8N0 203 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 ZBTB34Q8NCN2 500 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 SMIM4Q8WVI0 70 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 FCAMRQ8WWV6 532 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 RAX2Q96IS3 184 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 MS4A10Q96PG2 267 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 NUBP2Q9Y5Y2 271 aa9.56□□□□□ -0.88
SMARCD3-213ENST00000489503 GPR31O00270 319 aa9.55□□□□□ -0.88
SMARCD3-213ENST00000489503 PI3P19957 117 aa9.55□□□□□ -0.88
SMARCD3-213ENST00000489503 KIR2DS2P43631 304 aa9.55□□□□□ -0.88
SMARCD3-213ENST00000489503 KIAA0141Q14154 515 aaPredicted RBP9.55□□□□□ -0.88
SMARCD3-213ENST00000489503 OXLD1Q5BKU9 147 aa9.55□□□□□ -0.88
SMARCD3-213ENST00000489503 FOXB2Q5VYV0 432 aa9.55□□□□□ -0.88
SMARCD3-213ENST00000489503 TEX45Q8NA69 505 aa9.55□□□□□ -0.88
SMARCD3-213ENST00000489503 OR5T1Q8NG75 326 aa9.55□□□□□ -0.88
SMARCD3-213ENST00000489503 MYOZ3Q8TDC0 251 aa9.55□□□□□ -0.88
SMARCD3-213ENST00000489503 SRSF12Q8WXF0 261 aaKnown RBP9.55□□□□□ -0.88
SMARCD3-213ENST00000489503 ALX4Q9H161 411 aaPredicted RBP9.55□□□□□ -0.88
SMARCD3-213ENST00000489503 ZFP57Q9NU63 452 aa9.55□□□□□ -0.88
SMARCD3-213ENST00000489503 PGLYRP1O75594 196 aaPredicted RBP9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 KBTBD11O94819 623 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 RAB3DO95716 219 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 IGHV3-11P01762 117 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 IFNA6P05013 189 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 PGAM2P15259 253 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 IGLL1P15814 213 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 CD33P20138 364 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 RAB9AP51151 201 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 RAB25P57735 213 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 TMEM65Q6PI78 240 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 C19orf35Q6ZS72 473 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 MRPL41Q8IXM3 137 aaKnown RBP9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 PUSL1Q8N0Z8 303 aaKnown RBP9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 LINC00482Q8N8I6 264 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 ZNF491Q8N8L2 437 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 TMEM229BQ8NBD8 167 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 C15orf40Q8WUR7 153 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 RHOVQ96L33 236 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 PHB2Q99623 299 aa9.54□□□□□ -0.88
SMARCD3-213ENST00000489503 TRAV3A0A0B4J244 114 aa9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 HMX3A6NHT5 357 aa9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 MSGN1A6NI15 193 aa9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 RBFOX2O43251 390 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 TPPPO94811 219 aa9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 OR2A4O95047 310 aa9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 CD74P04233 296 aa9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 ZNF735P0CB33 412 aa9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 CDX1P47902 265 aaPredicted RBP9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 TPPP2P59282 170 aa9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 TAS2R19P59542 299 aa9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 MRPS10P82664 201 aaKnown RBP9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 DEFA6Q01524 100 aa9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 TMEM267Q0VDI3 215 aaPredicted RBP9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 SCGB2B2Q4G0G5 96 aa9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 SAMD5Q5TGI4 173 aa9.53□□□□□ -0.88
SMARCD3-213ENST00000489503 OR4A47Q6IF82 309 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms