RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 IGLV2-14P01704 120 aa18.72■□□□□ 0.59
LIME1-206ENST00000487026 CTXN2P0C2S0 81 aa18.72■□□□□ 0.59
LIME1-206ENST00000487026 C10orf55Q5SWW7 151 aa18.72■□□□□ 0.59
LIME1-206ENST00000487026 KCTD9Q7L273 389 aa18.72■□□□□ 0.59
LIME1-206ENST00000487026 VKORC1L1Q8N0U8 176 aa18.72■□□□□ 0.59
LIME1-206ENST00000487026 LGALS14Q8TCE9 139 aa18.72■□□□□ 0.59
LIME1-206ENST00000487026 DCSTAMPQ9H295 470 aa18.72■□□□□ 0.59
LIME1-206ENST00000487026 ZMAT4Q9H898 229 aa18.72■□□□□ 0.59
LIME1-206ENST00000487026 AKIP1Q9NQ31 210 aa18.72■□□□□ 0.59
LIME1-206ENST00000487026 SSR3Q9UNL2 185 aa18.72■□□□□ 0.59
LIME1-206ENST00000487026 RBMX2Q9Y388 322 aaKnown RBP18.72■□□□□ 0.59
LIME1-206ENST00000487026 ATP6V1G2O95670 118 aa18.71■□□□□ 0.59
LIME1-206ENST00000487026 CLEC2LP0C7M8 214 aa18.71■□□□□ 0.59
LIME1-206ENST00000487026 GNG2P59768 71 aa18.71■□□□□ 0.59
LIME1-206ENST00000487026 RHOGP84095 191 aa18.71■□□□□ 0.59
LIME1-206ENST00000487026 ZNF45Q02386 682 aa18.71■□□□□ 0.59
LIME1-206ENST00000487026 CDK10Q15131 360 aa18.71■□□□□ 0.59
LIME1-206ENST00000487026 RPEL1Q2QD12 228 aa18.71■□□□□ 0.59
LIME1-206ENST00000487026 SFXN4Q6P4A7 337 aa18.71■□□□□ 0.59
LIME1-206ENST00000487026 CNIH2Q6PI25 160 aa18.71■□□□□ 0.59
LIME1-206ENST00000487026 TPRA1Q86W33 373 aa18.71■□□□□ 0.59
LIME1-206ENST00000487026 MUC7Q8TAX7 377 aa18.71■□□□□ 0.59
LIME1-206ENST00000487026 RNF167Q9H6Y7 350 aa18.71■□□□□ 0.59
LIME1-206ENST00000487026 CSN3P07498 182 aa18.7■□□□□ 0.58
LIME1-206ENST00000487026 SDC2P34741 201 aa18.7■□□□□ 0.58
LIME1-206ENST00000487026 MXD1Q05195 221 aa18.7■□□□□ 0.58
LIME1-206ENST00000487026 PRELID3BQ9Y3B1 194 aa18.7■□□□□ 0.58
LIME1-206ENST00000487026 ACTL6BO94805 426 aa18.69■□□□□ 0.58
LIME1-206ENST00000487026 ATP5G2Q06055 141 aa18.69■□□□□ 0.58
LIME1-206ENST00000487026 TATDN3Q17R31 274 aa18.69■□□□□ 0.58
LIME1-206ENST00000487026 SGPP2Q8IWX5 399 aa18.69■□□□□ 0.58
LIME1-206ENST00000487026 MMD2Q8IY49 270 aa18.69■□□□□ 0.58
LIME1-206ENST00000487026 FCGR1BQ92637 280 aa18.69■□□□□ 0.58
LIME1-206ENST00000487026 SNAPC3Q92966 411 aa18.69■□□□□ 0.58
LIME1-206ENST00000487026 GPHA2Q96T91 129 aa18.69■□□□□ 0.58
LIME1-206ENST00000487026 C19orf73Q9NVV2 129 aa18.69■□□□□ 0.58
LIME1-206ENST00000487026 ANXA10Q9UJ72 324 aa18.69■□□□□ 0.58
LIME1-206ENST00000487026 SPATA2Q9UM82 520 aa18.69■□□□□ 0.58
LIME1-206ENST00000487026 IZUMO1RA6ND01 250 aa18.68■□□□□ 0.58
LIME1-206ENST00000487026 CD36P16671 472 aa18.68■□□□□ 0.58
LIME1-206ENST00000487026 EXOSC2Q13868 293 aaKnown RBP18.68■□□□□ 0.58
LIME1-206ENST00000487026 CASC10Q5T4H9 136 aa18.68■□□□□ 0.58
LIME1-206ENST00000487026 OR5H6Q8NGV6 325 aa18.68■□□□□ 0.58
LIME1-206ENST00000487026 TCTEX1D2Q8WW35 142 aa18.68■□□□□ 0.58
LIME1-206ENST00000487026 SPIN2AQ99865 258 aa18.68■□□□□ 0.58
LIME1-206ENST00000487026 SPIN2BQ9BPZ2 258 aa18.68■□□□□ 0.58
LIME1-206ENST00000487026 TM2D3Q9BRN9 247 aa18.68■□□□□ 0.58
LIME1-206ENST00000487026 RHBDL2Q9NX52 303 aa18.68■□□□□ 0.58
LIME1-206ENST00000487026 TRBV9A0A0B4J1U6 114 aa18.67■□□□□ 0.58
LIME1-206ENST00000487026 HMX3A6NHT5 357 aa18.67■□□□□ 0.58
LIME1-206ENST00000487026 H0Y980 276 aa18.67■□□□□ 0.58
LIME1-206ENST00000487026 BMPR1BO00238 502 aa18.67■□□□□ 0.58
LIME1-206ENST00000487026 SCGNO76038 276 aa18.67■□□□□ 0.58
LIME1-206ENST00000487026 SLC22A5O76082 557 aa18.67■□□□□ 0.58
LIME1-206ENST00000487026 PTHLHP12272 177 aa18.67■□□□□ 0.58
LIME1-206ENST00000487026 BRWD1-AS2P59051 145 aa18.67■□□□□ 0.58
LIME1-206ENST00000487026 C19orf35Q6ZS72 473 aa18.67■□□□□ 0.58
LIME1-206ENST00000487026 TTC9CQ8N5M4 171 aa18.67■□□□□ 0.58
LIME1-206ENST00000487026 TAS2R8Q9NYW2 309 aa18.67■□□□□ 0.58
LIME1-206ENST00000487026 MRPS7Q9Y2R9 242 aaKnown RBP18.67■□□□□ 0.58
LIME1-206ENST00000487026 DYNC2H1Q8NCM8 4307 aaKnown RBP18.67■□□□□ 0.58
LIME1-206ENST00000487026 TRAV18A0A075B6X5 111 aa18.66■□□□□ 0.58
LIME1-206ENST00000487026 FAM223BA6NKX1 122 aa18.66■□□□□ 0.58
LIME1-206ENST00000487026 CREBL2O60519 120 aaPredicted RBP18.66■□□□□ 0.58
LIME1-206ENST00000487026 EIF4EBP1Q13541 118 aaPredicted RBP18.66■□□□□ 0.58
LIME1-206ENST00000487026 FAM223AQ8IWN6 122 aa18.66■□□□□ 0.58
LIME1-206ENST00000487026 MFSD4AQ8N468 514 aa18.66■□□□□ 0.58
LIME1-206ENST00000487026 GVQW1Q8N7I0 195 aa18.66■□□□□ 0.58
LIME1-206ENST00000487026 YTHDF1Q9BYJ9 559 aaKnown RBP18.66■□□□□ 0.58
LIME1-206ENST00000487026 Q9H521 79 aa18.66■□□□□ 0.58
LIME1-206ENST00000487026 LOC100506127A0A0U1RQW1 187 aa18.65■□□□□ 0.58
LIME1-206ENST00000487026 A8MZ25 164 aa18.65■□□□□ 0.58
LIME1-206ENST00000487026 E7EUB6 86 aa18.65■□□□□ 0.58
LIME1-206ENST00000487026 OR2J3O76001 311 aa18.65■□□□□ 0.58
LIME1-206ENST00000487026 IDNKQ5T6J7 187 aa18.65■□□□□ 0.58
LIME1-206ENST00000487026 OR4S2Q8NH73 311 aa18.65■□□□□ 0.58
LIME1-206ENST00000487026 HSD17B10Q99714 261 aaKnown RBP18.65■□□□□ 0.58
LIME1-206ENST00000487026 TEX22C9J3V5 150 aa18.64■□□□□ 0.57
LIME1-206ENST00000487026 TNFSF12O43508 249 aa18.64■□□□□ 0.57
LIME1-206ENST00000487026 OR2A4O95047 310 aa18.64■□□□□ 0.57
LIME1-206ENST00000487026 FCER2P06734 321 aa18.64■□□□□ 0.57
LIME1-206ENST00000487026 IL6RP08887 468 aaPredicted RBP18.64■□□□□ 0.57
LIME1-206ENST00000487026 ZNF773Q6PK81 442 aa18.64■□□□□ 0.57
LIME1-206ENST00000487026 SLC25A38Q96DW6 304 aa18.64■□□□□ 0.57
LIME1-206ENST00000487026 FYTTD1Q96QD9 318 aaKnown RBP18.64■□□□□ 0.57
LIME1-206ENST00000487026 OR2A7Q96R45 310 aa18.64■□□□□ 0.57
LIME1-206ENST00000487026 THAP7Q9BT49 309 aaPredicted RBP18.64■□□□□ 0.57
LIME1-206ENST00000487026 CCL28Q9NRJ3 127 aa18.64■□□□□ 0.57
LIME1-206ENST00000487026 SIGLEC8Q9NYZ4 499 aa18.64■□□□□ 0.57
LIME1-206ENST00000487026 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.63■□□□□ 0.57
LIME1-206ENST00000487026 PPP5D1E7EU14 171 aa18.63■□□□□ 0.57
LIME1-206ENST00000487026 KBTBD11O94819 623 aa18.63■□□□□ 0.57
LIME1-206ENST00000487026 LYL1P12980 280 aa18.63■□□□□ 0.57
LIME1-206ENST00000487026 FCGR2CP31995 323 aa18.63■□□□□ 0.57
LIME1-206ENST00000487026 ARPC4P59998 168 aa18.63■□□□□ 0.57
LIME1-206ENST00000487026 C15orf32Q32M92 178 aa18.63■□□□□ 0.57
LIME1-206ENST00000487026 LCN12Q6JVE5 192 aa18.63■□□□□ 0.57
LIME1-206ENST00000487026 ADAMTSL5Q6ZMM2 481 aa18.63■□□□□ 0.57
LIME1-206ENST00000487026 SSX9Q7RTT3 188 aa18.63■□□□□ 0.57
LIME1-206ENST00000487026 PUSL1Q8N0Z8 303 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms