RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 LGALS4P56470 323 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 EBI3Q14213 229 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 SSX2Q16385 188 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 RTL8BQ17RB0 113 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 MRGPRG-AS1Q2M3A8 158 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 TUSC1Q2TAM9 212 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 AARDQ4LEZ3 155 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 Q5BKY6 102 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 GPR157Q5UAW9 335 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 GSG1LQ6UXU4 331 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 BRD3OSQ6XYD6 125 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 C9orf139Q6ZV77 190 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 MOB3BQ86TA1 216 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 PUSL1Q8N0Z8 303 aaKnown RBP6.62□□□□□ -1.35
USP4-210ENST00000483212 Q8N6K4 173 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 ZBTB8BQ8NAP8 495 aaPredicted RBP6.62□□□□□ -1.35
USP4-210ENST00000483212 OR4D5Q8NGN0 318 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 OSR1Q8TAX0 266 aaPredicted RBP6.62□□□□□ -1.35
USP4-210ENST00000483212 ASB13Q8WXK3 278 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 R3HDM4Q96D70 268 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 RITA1Q96K30 269 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 C2orf50Q96LR7 162 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 CHIAQ9BZP6 476 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 MEGF9Q9H1U4 602 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 MMP24Q9Y5R2 645 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 WNK2Q9Y3S1 2297 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 TRAV14DV4A0A0A6YYC5 116 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 PIGBOS1A0A0B4J2F0 54 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 C13orf42A0A1B0GVH6 325 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 C5orf51A6NDU8 294 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 CYSRT1A8MQ03 144 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 SMLR1H3BR10 107 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 PFDN1O60925 122 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 KRASP01116 189 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 IFNA21P01568 189 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 CRYGBP07316 175 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 OR9G9P0C7N8 305 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 SAA1P0DJI8 122 aaPredicted RBP6.61□□□□□ -1.35
USP4-210ENST00000483212 DYNLT3P51808 116 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 RAP2BP61225 183 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 IAH1Q2TAA2 248 aaPredicted RBP6.61□□□□□ -1.35
USP4-210ENST00000483212 CCDC144NLQ6NUI1 221 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 SPNS3Q6ZMD2 512 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 FAM219AQ8IW50 185 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 VKORC1L1Q8N0U8 176 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 OR4C13Q8NGP0 309 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 PIFOQ8TCI5 191 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 FLYWCH2Q96CP2 140 aaKnown RBP6.61□□□□□ -1.35
USP4-210ENST00000483212 HARBI1Q96MB7 349 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 NMES1Q9C002 83 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 TMEM140Q9NV12 185 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 COA4Q9NYJ1 87 aa6.61□□□□□ -1.35
USP4-210ENST00000483212 TEX15Q9BXT5 2789 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 TRAV3A0A0B4J244 114 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 A0A1B0GU03 582 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 FAM25EA8MYX2 175 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 H7C2Y5 167 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 ATG12O94817 140 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 NDUFA3O95167 84 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 HRASP01112 189 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 IGKV1D-33P01593 117 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 IGKV1-33P01594 117 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 SNRNP70P08621 437 aaKnown RBP6.6□□□□□ -1.35
USP4-210ENST00000483212 CNTFRP26992 372 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 ARHGDIBP52566 201 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 AKR1C2P52895 323 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 BPIFB3P59826 476 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 UBE2KP61086 200 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 RELBQ01201 579 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 ID3Q02535 119 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 SMCO1Q147U7 214 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 FAM120AOSQ5T036 256 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 OR4A47Q6IF82 309 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 THNSL2Q86YJ6 484 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 FOXRED2Q8IWF2 684 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 BCL6BQ8N143 479 aaPredicted RBP6.6□□□□□ -1.35
USP4-210ENST00000483212 TMEM167AQ8TBQ9 72 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 EAF1Q96JC9 268 aaPredicted RBP6.6□□□□□ -1.35
USP4-210ENST00000483212 RHOVQ96L33 236 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 SPIN2AQ99865 258 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 RNF5Q99942 180 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 SPIN2BQ9BPZ2 258 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 TMUB1Q9BVT8 246 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 MS4A7Q9GZW8 240 aaPredicted RBP6.6□□□□□ -1.35
USP4-210ENST00000483212 C11orf1Q9H5F2 150 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 RANBP3Q9H6Z4 567 aaPredicted RBP6.6□□□□□ -1.35
USP4-210ENST00000483212 BET1LQ9NYM9 111 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 CACNG5Q9UF02 275 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 NUP50Q9UKX7 468 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 ABCA1O95477 2261 aa6.6□□□□□ -1.35
USP4-210ENST00000483212 MDFIC2A0A1B0GVS7 189 aa6.59□□□□□ -1.35
USP4-210ENST00000483212 H0YIZ8 118 aa6.59□□□□□ -1.35
USP4-210ENST00000483212 BOLA2-SMG1P6H3BVE0 249 aa6.59□□□□□ -1.35
USP4-210ENST00000483212 UPK2O00526 184 aa6.59□□□□□ -1.35
USP4-210ENST00000483212 SHOXO15266 292 aa6.59□□□□□ -1.35
USP4-210ENST00000483212 KBTBD11O94819 623 aa6.59□□□□□ -1.35
USP4-210ENST00000483212 MOSP00540 346 aa6.59□□□□□ -1.35
USP4-210ENST00000483212 MBPP02686 304 aaPredicted RBP6.59□□□□□ -1.35
USP4-210ENST00000483212 C1QBP02746 253 aa6.59□□□□□ -1.35
USP4-210ENST00000483212 LYL1P12980 280 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms