RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 CDNFQ49AH0 187 aa11.64□□□□□ -0.55
LIMS3-203ENST00000480744 OR2B11Q5JQS5 317 aa11.64□□□□□ -0.55
LIMS3-203ENST00000480744 ZNF343Q6P1L6 599 aa11.64□□□□□ -0.55
LIMS3-203ENST00000480744 Q6ZS49 121 aa11.64□□□□□ -0.55
LIMS3-203ENST00000480744 ADAD2Q8NCV1 583 aaKnown RBP11.64□□□□□ -0.55
LIMS3-203ENST00000480744 OR13F1Q8NGS4 319 aa11.64□□□□□ -0.55
LIMS3-203ENST00000480744 OSR1Q8TAX0 266 aaPredicted RBP11.64□□□□□ -0.55
LIMS3-203ENST00000480744 VCX3AQ9NNX9 186 aa11.64□□□□□ -0.55
LIMS3-203ENST00000480744 NOTOA8MTQ0 251 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 H0Y980 276 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 FCGR3BO75015 233 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 RBMXL2O75526 392 aaKnown RBP11.63□□□□□ -0.55
LIMS3-203ENST00000480744 TUSC2O75896 110 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 BRI3O95415 125 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 PRH1P02810 166 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 LYL1P12980 280 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 NFYAP23511 347 aaPredicted RBP11.63□□□□□ -0.55
LIMS3-203ENST00000480744 DTYMKP23919 212 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 LSM3P62310 102 aaKnown RBP11.63□□□□□ -0.55
LIMS3-203ENST00000480744 RHOGP84095 191 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 SFXN4Q6P4A7 337 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 IL34Q6ZMJ4 242 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 KCTD9Q7L273 389 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 ZNF645Q8N7E2 425 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 NUDCD2Q8WVJ2 157 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 FUNDC2Q9BWH2 189 aa11.63□□□□□ -0.55
LIMS3-203ENST00000480744 NAA50Q9GZZ1 169 aaKnown RBP11.63□□□□□ -0.55
LIMS3-203ENST00000480744 ZNF430Q9H8G1 570 aaPredicted RBP11.63□□□□□ -0.55
LIMS3-203ENST00000480744 AIREO43918 545 aa11.62□□□□□ -0.55
LIMS3-203ENST00000480744 CREBL2O60519 120 aaPredicted RBP11.62□□□□□ -0.55
LIMS3-203ENST00000480744 SAA1P0DJI8 122 aaPredicted RBP11.62□□□□□ -0.55
LIMS3-203ENST00000480744 EXOSC2Q13868 293 aaKnown RBP11.62□□□□□ -0.55
LIMS3-203ENST00000480744 CDK10Q15131 360 aa11.62□□□□□ -0.55
LIMS3-203ENST00000480744 C10orf55Q5SWW7 151 aa11.62□□□□□ -0.55
LIMS3-203ENST00000480744 HACD4Q5VWC8 232 aa11.62□□□□□ -0.55
LIMS3-203ENST00000480744 GTSCR1Q86UQ5 136 aa11.62□□□□□ -0.55
LIMS3-203ENST00000480744 TPRA1Q86W33 373 aa11.62□□□□□ -0.55
LIMS3-203ENST00000480744 SNAPC3Q92966 411 aa11.62□□□□□ -0.55
LIMS3-203ENST00000480744 TM2D3Q9BRN9 247 aa11.62□□□□□ -0.55
LIMS3-203ENST00000480744 MRPS26Q9BYN8 205 aaKnown RBP11.62□□□□□ -0.55
LIMS3-203ENST00000480744 AKIP1Q9NQ31 210 aa11.62□□□□□ -0.55
LIMS3-203ENST00000480744 C19orf73Q9NVV2 129 aa11.62□□□□□ -0.55
LIMS3-203ENST00000480744 DAPK2Q9UIK4 370 aa11.62□□□□□ -0.55
LIMS3-203ENST00000480744 MRPS7Q9Y2R9 242 aaKnown RBP11.62□□□□□ -0.55
LIMS3-203ENST00000480744 PRELID3BQ9Y3B1 194 aa11.62□□□□□ -0.55
LIMS3-203ENST00000480744 OR2W1Q9Y3N9 320 aa11.62□□□□□ -0.55
LIMS3-203ENST00000480744 TMEM235A6NFC5 223 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 CSN3P07498 182 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 CTXN2P0C2S0 81 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 ALDH3B2P48448 385 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 GNG2P59768 71 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 NCS1P62166 190 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 ATP5G2Q06055 141 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 ZFAND6Q6FIF0 208 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 LCN12Q6JVE5 192 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 MMD2Q8IY49 270 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 LGALS14Q8TCE9 139 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 CITED4Q96RK1 184 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 SPIN2AQ99865 258 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 SPIN2BQ9BPZ2 258 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 TUBA4BQ9H853 241 aa11.61□□□□□ -0.55
LIMS3-203ENST00000480744 RBMX2Q9Y388 322 aaKnown RBP11.61□□□□□ -0.55
LIMS3-203ENST00000480744 DYNC2H1Q8NCM8 4307 aaKnown RBP11.6□□□□□ -0.55
LIMS3-203ENST00000480744 FAM223BA6NKX1 122 aa11.6□□□□□ -0.55
LIMS3-203ENST00000480744 A8MZ25 164 aa11.6□□□□□ -0.55
LIMS3-203ENST00000480744 OR2A4O95047 310 aa11.6□□□□□ -0.55
LIMS3-203ENST00000480744 RPL30P62888 115 aaKnown RBP11.6□□□□□ -0.55
LIMS3-203ENST00000480744 ZNF45Q02386 682 aa11.6□□□□□ -0.55
LIMS3-203ENST00000480744 TIMM50Q3ZCQ8 353 aa11.6□□□□□ -0.55
LIMS3-203ENST00000480744 FAM223AQ8IWN6 122 aa11.6□□□□□ -0.55
LIMS3-203ENST00000480744 VKORC1L1Q8N0U8 176 aa11.6□□□□□ -0.55
LIMS3-203ENST00000480744 Q8N402 240 aa11.6□□□□□ -0.55
LIMS3-203ENST00000480744 OR5H6Q8NGV6 325 aa11.6□□□□□ -0.55
LIMS3-203ENST00000480744 TCTEX1D2Q8WW35 142 aa11.6□□□□□ -0.55
LIMS3-203ENST00000480744 DCSTAMPQ9H295 470 aa11.6□□□□□ -0.55
LIMS3-203ENST00000480744 PEMTQ9UBM1 199 aa11.6□□□□□ -0.55
LIMS3-203ENST00000480744 IGKV1D-13A0A0B4J2D9 117 aa11.59□□□□□ -0.55
LIMS3-203ENST00000480744 IZUMO1RA6ND01 250 aa11.59□□□□□ -0.55
LIMS3-203ENST00000480744 HMX3A6NHT5 357 aa11.59□□□□□ -0.55
LIMS3-203ENST00000480744 BMPR1BO00238 502 aa11.59□□□□□ -0.55
LIMS3-203ENST00000480744 OR2J3O76001 311 aa11.59□□□□□ -0.55
LIMS3-203ENST00000480744 SLC22A5O76082 557 aa11.59□□□□□ -0.55
LIMS3-203ENST00000480744 HLA-DQB1P01920 261 aa11.59□□□□□ -0.55
LIMS3-203ENST00000480744 IGKV1-13P0DP09 117 aa11.59□□□□□ -0.55
LIMS3-203ENST00000480744 RPS19P39019 145 aaKnown RBP11.59□□□□□ -0.55
LIMS3-203ENST00000480744 VBP1P61758 197 aa11.59□□□□□ -0.55
LIMS3-203ENST00000480744 CNIH2Q6PI25 160 aa11.59□□□□□ -0.55
LIMS3-203ENST00000480744 ISOC1Q96CN7 298 aa11.59□□□□□ -0.55
LIMS3-203ENST00000480744 SLC25A38Q96DW6 304 aa11.59□□□□□ -0.55
LIMS3-203ENST00000480744 FYTTD1Q96QD9 318 aaKnown RBP11.59□□□□□ -0.55
LIMS3-203ENST00000480744 SPATA25Q9BR10 227 aa11.59□□□□□ -0.55
LIMS3-203ENST00000480744 SPATA2Q9UM82 520 aa11.59□□□□□ -0.55
LIMS3-203ENST00000480744 DPPA5A6NC42 116 aa11.58□□□□□ -0.56
LIMS3-203ENST00000480744 SSX5O60225 188 aa11.58□□□□□ -0.56
LIMS3-203ENST00000480744 SCGNO76038 276 aa11.58□□□□□ -0.56
LIMS3-203ENST00000480744 GABARAPO95166 117 aa11.58□□□□□ -0.56
LIMS3-203ENST00000480744 CTF1Q16619 201 aa11.58□□□□□ -0.56
LIMS3-203ENST00000480744 HAGHQ16775 308 aa11.58□□□□□ -0.56
LIMS3-203ENST00000480744 IDNKQ5T6J7 187 aa11.58□□□□□ -0.56
LIMS3-203ENST00000480744 TTC9CQ8N5M4 171 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms