RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 PGPEP1LA6NFU8 196 aa14.78□□□□□ -0.04
MCF2L-221ENST00000469415 SRRM5B3KS81 715 aa14.78□□□□□ -0.04
MCF2L-221ENST00000469415 FOLR2P14207 255 aa14.78□□□□□ -0.04
MCF2L-221ENST00000469415 NDUFB7P17568 137 aa14.78□□□□□ -0.04
MCF2L-221ENST00000469415 NPCDR1Q9BY65 106 aa14.78□□□□□ -0.04
MCF2L-221ENST00000469415 CD81P60033 236 aa14.77□□□□□ -0.04
MCF2L-221ENST00000469415 IGFL2Q6UWQ7 119 aa14.77□□□□□ -0.04
MCF2L-221ENST00000469415 S1PR3Q99500 378 aa14.77□□□□□ -0.04
MCF2L-221ENST00000469415 TUBA4BQ9H853 241 aa14.77□□□□□ -0.04
MCF2L-221ENST00000469415 DOK5Q9P104 306 aa14.77□□□□□ -0.04
MCF2L-221ENST00000469415 VAX2Q9UIW0 290 aa14.77□□□□□ -0.04
MCF2L-221ENST00000469415 C1QTNF9BB2RNN3 333 aa14.77□□□□□ -0.05
MCF2L-221ENST00000469415 AP4M1O00189 453 aa14.77□□□□□ -0.05
MCF2L-221ENST00000469415 ZZEF1O43149 2961 aa14.77□□□□□ -0.05
MCF2L-221ENST00000469415 SERF2P84101 59 aa14.77□□□□□ -0.05
MCF2L-221ENST00000469415 GFOD1Q9NXC2 390 aa14.77□□□□□ -0.05
MCF2L-221ENST00000469415 CALYQ9NYX4 217 aa14.77□□□□□ -0.05
MCF2L-221ENST00000469415 NCOR2Q9Y618 2525 aa14.77□□□□□ -0.05
MCF2L-221ENST00000469415 A0A1B0GW64 132 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 REG1BP48304 166 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 TNFAIP6P98066 277 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-221ENST00000469415 LURAP1Q96LR2 239 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 CHD8Q9HCK8 2581 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 A0A0U1RQK1 487 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 TMPRSS2O15393 492 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 CASP6P55212 293 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 FAM90A1Q86YD7 464 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 C1orf162Q8NEQ5 155 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-221ENST00000469415 PFDN5Q99471 154 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 HSD17B10Q99714 261 aaKnown RBP14.76□□□□□ -0.05
MCF2L-221ENST00000469415 ELOVL1Q9BW60 279 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 CISD1Q9NZ45 108 aaKnown RBP14.76□□□□□ -0.05
MCF2L-221ENST00000469415 C15orf62A8K5M9 175 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 MEF2BQ02080 365 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-221ENST00000469415 MBNL2Q5VZF2 373 aaKnown RBP14.76□□□□□ -0.05
MCF2L-221ENST00000469415 MIC13Q5XKP0 118 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 MRGPRGQ86SM5 289 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 FAM210BQ96KR6 192 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 PSMG3Q9BT73 122 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-221ENST00000469415 OR6C3Q9NZP0 311 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 GAB2Q9UQC2 676 aa14.76□□□□□ -0.05
MCF2L-221ENST00000469415 MGST3O14880 152 aa14.75□□□□□ -0.05
MCF2L-221ENST00000469415 RAB29O14966 203 aa14.75□□□□□ -0.05
MCF2L-221ENST00000469415 GZMHP20718 246 aa14.75□□□□□ -0.05
MCF2L-221ENST00000469415 ERVK-16P61578 105 aa14.75□□□□□ -0.05
MCF2L-221ENST00000469415 ZBTB34Q8NCN2 500 aa14.75□□□□□ -0.05
MCF2L-221ENST00000469415 SNIP1Q8TAD8 396 aaKnown RBP14.75□□□□□ -0.05
MCF2L-221ENST00000469415 MBD3L1Q8WWY6 194 aa14.75□□□□□ -0.05
MCF2L-221ENST00000469415 IFNL4K9M1U5 179 aa14.75□□□□□ -0.05
MCF2L-221ENST00000469415 PPIHO43447 177 aaKnown RBP14.75□□□□□ -0.05
MCF2L-221ENST00000469415 PSMB3P49720 205 aa14.75□□□□□ -0.05
MCF2L-221ENST00000469415 EIF4EBP1Q13541 118 aaPredicted RBP14.75□□□□□ -0.05
MCF2L-221ENST00000469415 PINX1Q96BK5 328 aaKnown RBP14.75□□□□□ -0.05
MCF2L-221ENST00000469415 TMEM140Q9NV12 185 aa14.75□□□□□ -0.05
MCF2L-221ENST00000469415 PMS2P5A8MQ11 134 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 SNRPCP09234 159 aaKnown RBP14.74□□□□□ -0.05
MCF2L-221ENST00000469415 HOXB1P14653 301 aaPredicted RBP14.74□□□□□ -0.05
MCF2L-221ENST00000469415 CHRNA7P36544 502 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 CT45A1Q5HYN5 189 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 RBMXL3Q8N7X1 1067 aaKnown RBP14.74□□□□□ -0.05
MCF2L-221ENST00000469415 CT45A3Q8NHU0 189 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 DERL1Q9BUN8 251 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 IFNA1P01562 189 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 ADH4P08319 380 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 CD1BP29016 333 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 SP5Q6BEB4 398 aaPredicted RBP14.74□□□□□ -0.05
MCF2L-221ENST00000469415 PPP1R35Q8TAP8 253 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 PRR7Q8TB68 274 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 GPR61Q9BZJ8 451 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 SMDT1Q9H4I9 107 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 CACNA1BQ00975 2339 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 A0A1W2PPV4 95 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 MBD3L4A6NDZ8 208 aaPredicted RBP14.74□□□□□ -0.05
MCF2L-221ENST00000469415 MBD3L3A6NE82 208 aaPredicted RBP14.74□□□□□ -0.05
MCF2L-221ENST00000469415 MBD3L5A6NJ08 208 aaPredicted RBP14.74□□□□□ -0.05
MCF2L-221ENST00000469415 UBE2CO00762 179 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 ACTL6BO94805 426 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 P0C879 139 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 ATP5G3P48201 142 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 NKX6-1P78426 367 aaPredicted RBP14.74□□□□□ -0.05
MCF2L-221ENST00000469415 SLC35E3Q7Z769 313 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 MOB3BQ86TA1 216 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 MBD3L2Q8NHZ7 208 aaPredicted RBP14.74□□□□□ -0.05
MCF2L-221ENST00000469415 SNX22Q96L94 193 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 IFI27L2Q9H2X8 130 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 PARLQ9H300 379 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 SDF2L1Q9HCN8 221 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 GCM1Q9NP62 436 aa14.74□□□□□ -0.05
MCF2L-221ENST00000469415 CSMD1Q96PZ7 3565 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 SAA2-SAA4A0A096LPE2 208 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 PIGBOS1A0A0B4J2F0 54 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 A0A1W2PPQ1 181 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 FAM90A26D6RGX4 464 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 SAA2P0DJI9 122 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-221ENST00000469415 DPPA3Q6W0C5 159 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 C16orf82Q7Z2V1 217 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 FRZBQ92765 325 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 ACTR3CQ9C0K3 210 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-221ENST00000469415 HIST1H2BKO60814 126 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 IGHV3-48P01763 117 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms