RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TXNL4BQ9NX01 149 aaKnown RBP18.61■□□□□ 0.57
PTCH1-210ENST00000468211 OR2W1Q9Y3N9 320 aa18.61■□□□□ 0.57
PTCH1-210ENST00000468211 BMPR1BO00238 502 aa18.6■□□□□ 0.57
PTCH1-210ENST00000468211 MPPED1O15442 326 aa18.6■□□□□ 0.57
PTCH1-210ENST00000468211 FCGR3BO75015 233 aa18.6■□□□□ 0.57
PTCH1-210ENST00000468211 HLA-DQB1P01920 261 aa18.6■□□□□ 0.57
PTCH1-210ENST00000468211 LYL1P12980 280 aa18.6■□□□□ 0.57
PTCH1-210ENST00000468211 CDK10Q15131 360 aa18.6■□□□□ 0.57
PTCH1-210ENST00000468211 RPEL1Q2QD12 228 aa18.6■□□□□ 0.57
PTCH1-210ENST00000468211 UBE2UQ5VVX9 321 aa18.6■□□□□ 0.57
PTCH1-210ENST00000468211 VKORC1L1Q8N0U8 176 aa18.6■□□□□ 0.57
PTCH1-210ENST00000468211 RAB26Q9ULW5 256 aa18.6■□□□□ 0.57
PTCH1-210ENST00000468211 RBMX2Q9Y388 322 aaKnown RBP18.6■□□□□ 0.57
PTCH1-210ENST00000468211 TRBV9A0A0B4J1U6 114 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 TMEM235A6NFC5 223 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 NOTOA8MTQ0 251 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 H0Y980 276 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 SSX5O60225 188 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 TUSC2O75896 110 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 FGF9P31371 208 aaPredicted RBP18.59■□□□□ 0.57
PTCH1-210ENST00000468211 MECP2P51608 486 aaKnown RBP18.59■□□□□ 0.57
PTCH1-210ENST00000468211 GABARAPL2P60520 117 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 EXOSC2Q13868 293 aaKnown RBP18.59■□□□□ 0.57
PTCH1-210ENST00000468211 ADAMTSL5Q6ZMM2 481 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 KCTD9Q7L273 389 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 SPARTQ8N0X7 666 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 SNAPC3Q92966 411 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 LYSTQ99698 3801 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 DCUN1D5Q9BTE7 237 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 CENPOQ9BU64 300 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 EDA2RQ9HAV5 297 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 SIGLEC8Q9NYZ4 499 aa18.59■□□□□ 0.57
PTCH1-210ENST00000468211 ARL6IP1Q15041 203 aa18.58■□□□□ 0.56
PTCH1-210ENST00000468211 C19orf35Q6ZS72 473 aa18.58■□□□□ 0.56
PTCH1-210ENST00000468211 DAPK2Q9UIK4 370 aa18.58■□□□□ 0.56
PTCH1-210ENST00000468211 OR2A4O95047 310 aa18.57■□□□□ 0.56
PTCH1-210ENST00000468211 PSMB9P28065 219 aa18.57■□□□□ 0.56
PTCH1-210ENST00000468211 BRWD1-AS2P59051 145 aa18.57■□□□□ 0.56
PTCH1-210ENST00000468211 EIF4EBP1Q13541 118 aaPredicted RBP18.57■□□□□ 0.56
PTCH1-210ENST00000468211 HAGHQ16775 308 aa18.57■□□□□ 0.56
PTCH1-210ENST00000468211 TATDN3Q17R31 274 aa18.57■□□□□ 0.56
PTCH1-210ENST00000468211 ZFAND6Q6FIF0 208 aa18.57■□□□□ 0.56
PTCH1-210ENST00000468211 MMD2Q8IY49 270 aa18.57■□□□□ 0.56
PTCH1-210ENST00000468211 TTC9CQ8N5M4 171 aa18.57■□□□□ 0.56
PTCH1-210ENST00000468211 GPHA2Q96T91 129 aa18.57■□□□□ 0.56
PTCH1-210ENST00000468211 DCSTAMPQ9H295 470 aa18.57■□□□□ 0.56
PTCH1-210ENST00000468211 ERICH4A6NGS2 130 aa18.56■□□□□ 0.56
PTCH1-210ENST00000468211 HMX3A6NHT5 357 aa18.56■□□□□ 0.56
PTCH1-210ENST00000468211 FAM223BA6NKX1 122 aa18.56■□□□□ 0.56
PTCH1-210ENST00000468211 E7EUB6 86 aa18.56■□□□□ 0.56
PTCH1-210ENST00000468211 CTXN2P0C2S0 81 aa18.56■□□□□ 0.56
PTCH1-210ENST00000468211 ATP5G2Q06055 141 aa18.56■□□□□ 0.56
PTCH1-210ENST00000468211 CNIH2Q6PI25 160 aa18.56■□□□□ 0.56
PTCH1-210ENST00000468211 FAM223AQ8IWN6 122 aa18.56■□□□□ 0.56
PTCH1-210ENST00000468211 LGALS14Q8TCE9 139 aa18.56■□□□□ 0.56
PTCH1-210ENST00000468211 SPIN2AQ99865 258 aa18.56■□□□□ 0.56
PTCH1-210ENST00000468211 SPIN2BQ9BPZ2 258 aa18.56■□□□□ 0.56
PTCH1-210ENST00000468211 DMRT1Q9Y5R6 373 aa18.56■□□□□ 0.56
PTCH1-210ENST00000468211 A0A1B0GW64 132 aa18.55■□□□□ 0.56
PTCH1-210ENST00000468211 TEX22C9J3V5 150 aa18.55■□□□□ 0.56
PTCH1-210ENST00000468211 MRPS14O60783 128 aaKnown RBP18.55■□□□□ 0.56
PTCH1-210ENST00000468211 OR2J3O76001 311 aa18.55■□□□□ 0.56
PTCH1-210ENST00000468211 ACTL6BO94805 426 aa18.55■□□□□ 0.56
PTCH1-210ENST00000468211 EDN2P20800 178 aa18.55■□□□□ 0.56
PTCH1-210ENST00000468211 LCN12Q6JVE5 192 aa18.55■□□□□ 0.56
PTCH1-210ENST00000468211 Q8N402 240 aa18.55■□□□□ 0.56
PTCH1-210ENST00000468211 OR51E2Q9H255 320 aa18.55■□□□□ 0.56
PTCH1-210ENST00000468211 ANXA10Q9UJ72 324 aa18.55■□□□□ 0.56
PTCH1-210ENST00000468211 PRELID3BQ9Y3B1 194 aa18.55■□□□□ 0.56
PTCH1-210ENST00000468211 RRP15Q9Y3B9 282 aaKnown RBP18.55■□□□□ 0.56
PTCH1-210ENST00000468211 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.54■□□□□ 0.56
PTCH1-210ENST00000468211 IL6RP08887 468 aaPredicted RBP18.54■□□□□ 0.56
PTCH1-210ENST00000468211 CLEC2LP0C7M8 214 aa18.54■□□□□ 0.56
PTCH1-210ENST00000468211 CD36P16671 472 aa18.54■□□□□ 0.56
PTCH1-210ENST00000468211 GNG2P59768 71 aa18.54■□□□□ 0.56
PTCH1-210ENST00000468211 SFXN4Q6P4A7 337 aa18.54■□□□□ 0.56
PTCH1-210ENST00000468211 PALMDQ9NP74 551 aa18.54■□□□□ 0.56
PTCH1-210ENST00000468211 SPATA2Q9UM82 520 aa18.54■□□□□ 0.56
PTCH1-210ENST00000468211 MRPS7Q9Y2R9 242 aaKnown RBP18.54■□□□□ 0.56
PTCH1-210ENST00000468211 PPP5D1E7EU14 171 aa18.53■□□□□ 0.56
PTCH1-210ENST00000468211 CREBL2O60519 120 aaPredicted RBP18.53■□□□□ 0.56
PTCH1-210ENST00000468211 PTHLHP12272 177 aa18.53■□□□□ 0.56
PTCH1-210ENST00000468211 GTSCR1Q86UQ5 136 aa18.53■□□□□ 0.56
PTCH1-210ENST00000468211 TPRA1Q86W33 373 aa18.53■□□□□ 0.56
PTCH1-210ENST00000468211 PUSL1Q8N0Z8 303 aaKnown RBP18.53■□□□□ 0.56
PTCH1-210ENST00000468211 NECAP1Q8NC96 275 aa18.53■□□□□ 0.56
PTCH1-210ENST00000468211 TCTEX1D2Q8WW35 142 aa18.53■□□□□ 0.56
PTCH1-210ENST00000468211 RNF167Q9H6Y7 350 aa18.53■□□□□ 0.56
PTCH1-210ENST00000468211 TAS2R8Q9NYW2 309 aa18.53■□□□□ 0.56
PTCH1-210ENST00000468211 PEMTQ9UBM1 199 aa18.53■□□□□ 0.56
PTCH1-210ENST00000468211 SLC22A5O76082 557 aa18.52■□□□□ 0.56
PTCH1-210ENST00000468211 KBTBD11O94819 623 aa18.52■□□□□ 0.56
PTCH1-210ENST00000468211 HLA-AP01891 365 aaKnown RBP18.52■□□□□ 0.56
PTCH1-210ENST00000468211 C15orf32Q32M92 178 aa18.52■□□□□ 0.56
PTCH1-210ENST00000468211 CD300EQ496F6 205 aaPredicted RBP18.52■□□□□ 0.56
PTCH1-210ENST00000468211 MFSD4AQ8N468 514 aa18.52■□□□□ 0.56
PTCH1-210ENST00000468211 OR5H6Q8NGV6 325 aa18.52■□□□□ 0.56
PTCH1-210ENST00000468211 HSD17B10Q99714 261 aaKnown RBP18.52■□□□□ 0.56
PTCH1-210ENST00000468211 SPATA25Q9BR10 227 aa18.52■□□□□ 0.56
PTCH1-210ENST00000468211 RHBDL2Q9NX52 303 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms