RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 CDK10Q15131 360 aa11.8□□□□□ -0.52
HOXB3-204ENST00000465120 MRGPRG-AS1Q2M3A8 158 aa11.8□□□□□ -0.52
HOXB3-204ENST00000465120 GTSCR1Q86UQ5 136 aa11.8□□□□□ -0.52
HOXB3-204ENST00000465120 Q8N1Y9 231 aa11.8□□□□□ -0.52
HOXB3-204ENST00000465120 ADAD2Q8NCV1 583 aaKnown RBP11.8□□□□□ -0.52
HOXB3-204ENST00000465120 NUDCD2Q8WVJ2 157 aa11.8□□□□□ -0.52
HOXB3-204ENST00000465120 SPIN2AQ99865 258 aa11.8□□□□□ -0.52
HOXB3-204ENST00000465120 SPIN2BQ9BPZ2 258 aa11.8□□□□□ -0.52
HOXB3-204ENST00000465120 TUBA4BQ9H853 241 aa11.8□□□□□ -0.52
HOXB3-204ENST00000465120 ZNF430Q9H8G1 570 aaPredicted RBP11.8□□□□□ -0.52
HOXB3-204ENST00000465120 TXNL4BQ9NX01 149 aaKnown RBP11.8□□□□□ -0.52
HOXB3-204ENST00000465120 SSR3Q9UNL2 185 aa11.8□□□□□ -0.52
HOXB3-204ENST00000465120 TMEM235A6NFC5 223 aa11.79□□□□□ -0.52
HOXB3-204ENST00000465120 MRPS14O60783 128 aaKnown RBP11.79□□□□□ -0.52
HOXB3-204ENST00000465120 SLC22A5O76082 557 aa11.79□□□□□ -0.52
HOXB3-204ENST00000465120 CASC10Q5T4H9 136 aa11.79□□□□□ -0.52
HOXB3-204ENST00000465120 UBE2UQ5VVX9 321 aa11.79□□□□□ -0.52
HOXB3-204ENST00000465120 MMD2Q8IY49 270 aa11.79□□□□□ -0.52
HOXB3-204ENST00000465120 SPARTQ8N0X7 666 aa11.79□□□□□ -0.52
HOXB3-204ENST00000465120 TCTEX1D2Q8WW35 142 aa11.79□□□□□ -0.52
HOXB3-204ENST00000465120 YTHDF1Q9BYJ9 559 aaKnown RBP11.79□□□□□ -0.52
HOXB3-204ENST00000465120 DCSTAMPQ9H295 470 aa11.79□□□□□ -0.52
HOXB3-204ENST00000465120 AKIP1Q9NQ31 210 aa11.79□□□□□ -0.52
HOXB3-204ENST00000465120 PEMTQ9UBM1 199 aa11.79□□□□□ -0.52
HOXB3-204ENST00000465120 SPATA2Q9UM82 520 aa11.79□□□□□ -0.52
HOXB3-204ENST00000465120 DPPA5A6NC42 116 aa11.78□□□□□ -0.52
HOXB3-204ENST00000465120 FAM223BA6NKX1 122 aa11.78□□□□□ -0.52
HOXB3-204ENST00000465120 RBMXL2O75526 392 aaKnown RBP11.78□□□□□ -0.52
HOXB3-204ENST00000465120 SCGNO76038 276 aa11.78□□□□□ -0.52
HOXB3-204ENST00000465120 HLA-DQB1P01920 261 aa11.78□□□□□ -0.52
HOXB3-204ENST00000465120 CSN3P07498 182 aa11.78□□□□□ -0.52
HOXB3-204ENST00000465120 FGF9P31371 208 aaPredicted RBP11.78□□□□□ -0.52
HOXB3-204ENST00000465120 EXOSC2Q13868 293 aaKnown RBP11.78□□□□□ -0.52
HOXB3-204ENST00000465120 LCN12Q6JVE5 192 aa11.78□□□□□ -0.52
HOXB3-204ENST00000465120 CNIH2Q6PI25 160 aa11.78□□□□□ -0.52
HOXB3-204ENST00000465120 IL34Q6ZMJ4 242 aa11.78□□□□□ -0.52
HOXB3-204ENST00000465120 TPRA1Q86W33 373 aa11.78□□□□□ -0.52
HOXB3-204ENST00000465120 FAM223AQ8IWN6 122 aa11.78□□□□□ -0.52
HOXB3-204ENST00000465120 VKORC1L1Q8N0U8 176 aa11.78□□□□□ -0.52
HOXB3-204ENST00000465120 RBMX2Q9Y388 322 aaKnown RBP11.78□□□□□ -0.52
HOXB3-204ENST00000465120 TNFAIP8O95379 198 aa11.77□□□□□ -0.53
HOXB3-204ENST00000465120 ARPC4P59998 168 aa11.77□□□□□ -0.53
HOXB3-204ENST00000465120 RPL30P62888 115 aaKnown RBP11.77□□□□□ -0.53
HOXB3-204ENST00000465120 MXD1Q05195 221 aa11.77□□□□□ -0.53
HOXB3-204ENST00000465120 C10orf55Q5SWW7 151 aa11.77□□□□□ -0.53
HOXB3-204ENST00000465120 SLC25A42Q86VD7 318 aa11.77□□□□□ -0.53
HOXB3-204ENST00000465120 Q8N402 240 aa11.77□□□□□ -0.53
HOXB3-204ENST00000465120 LGALS14Q8TCE9 139 aa11.77□□□□□ -0.53
HOXB3-204ENST00000465120 FCGR1BQ92637 280 aa11.77□□□□□ -0.53
HOXB3-204ENST00000465120 FYTTD1Q96QD9 318 aaKnown RBP11.77□□□□□ -0.53
HOXB3-204ENST00000465120 TM2D3Q9BRN9 247 aa11.77□□□□□ -0.53
HOXB3-204ENST00000465120 OR51E2Q9H255 320 aa11.77□□□□□ -0.53
HOXB3-204ENST00000465120 C19orf73Q9NVV2 129 aa11.77□□□□□ -0.53
HOXB3-204ENST00000465120 ANXA10Q9UJ72 324 aa11.77□□□□□ -0.53
HOXB3-204ENST00000465120 IGKV1D-13A0A0B4J2D9 117 aa11.76□□□□□ -0.53
HOXB3-204ENST00000465120 HMX3A6NHT5 357 aa11.76□□□□□ -0.53
HOXB3-204ENST00000465120 OR2J3O76001 311 aa11.76□□□□□ -0.53
HOXB3-204ENST00000465120 OR2A4O95047 310 aa11.76□□□□□ -0.53
HOXB3-204ENST00000465120 IGKV1-13P0DP09 117 aa11.76□□□□□ -0.53
HOXB3-204ENST00000465120 ZNF45Q02386 682 aa11.76□□□□□ -0.53
HOXB3-204ENST00000465120 ZFAND6Q6FIF0 208 aa11.76□□□□□ -0.53
HOXB3-204ENST00000465120 SFXN4Q6P4A7 337 aa11.76□□□□□ -0.53
HOXB3-204ENST00000465120 TTC9CQ8N5M4 171 aa11.76□□□□□ -0.53
HOXB3-204ENST00000465120 OR4S2Q8NH73 311 aa11.76□□□□□ -0.53
HOXB3-204ENST00000465120 VSTM2AQ8TAG5 236 aa11.76□□□□□ -0.53
HOXB3-204ENST00000465120 CITED4Q96RK1 184 aa11.76□□□□□ -0.53
HOXB3-204ENST00000465120 HSD17B10Q99714 261 aaKnown RBP11.76□□□□□ -0.53
HOXB3-204ENST00000465120 RHBDL2Q9NX52 303 aa11.76□□□□□ -0.53
HOXB3-204ENST00000465120 TAS2R8Q9NYW2 309 aa11.76□□□□□ -0.53
HOXB3-204ENST00000465120 TNCP24821 2201 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 TRAV18A0A075B6X5 111 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 IZUMO1RA6ND01 250 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 A8MZ25 164 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 BMPR1BO00238 502 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 AIREO43918 545 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 SSX5O60225 188 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 SDC2P34741 201 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 RPL27AP46776 148 aaKnown RBP11.75□□□□□ -0.53
HOXB3-204ENST00000465120 C15orf32Q32M92 178 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 SSX9Q7RTT3 188 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 MFSD4AQ8N468 514 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 NECAP1Q8NC96 275 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 DYNLRB2Q8TF09 96 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 SECTM1Q8WVN6 248 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 ISOC1Q96CN7 298 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 OR2A7Q96R45 310 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 SPATA25Q9BR10 227 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 SIGLEC8Q9NYZ4 499 aa11.75□□□□□ -0.53
HOXB3-204ENST00000465120 TRBV9A0A0B4J1U6 114 aa11.74□□□□□ -0.53
HOXB3-204ENST00000465120 LOC100506127A0A0U1RQW1 187 aa11.74□□□□□ -0.53
HOXB3-204ENST00000465120 TNFSF12O43508 249 aa11.74□□□□□ -0.53
HOXB3-204ENST00000465120 IFNA6P05013 189 aa11.74□□□□□ -0.53
HOXB3-204ENST00000465120 CLEC2LP0C7M8 214 aa11.74□□□□□ -0.53
HOXB3-204ENST00000465120 HAGHQ16775 308 aa11.74□□□□□ -0.53
HOXB3-204ENST00000465120 IDNKQ5T6J7 187 aa11.74□□□□□ -0.53
HOXB3-204ENST00000465120 KCTD12Q96CX2 325 aaKnown RBP11.74□□□□□ -0.53
HOXB3-204ENST00000465120 GPHA2Q96T91 129 aa11.74□□□□□ -0.53
HOXB3-204ENST00000465120 FBXL7Q9UJT9 491 aa11.74□□□□□ -0.53
HOXB3-204ENST00000465120 ZNF257Q9Y2Q1 563 aa11.74□□□□□ -0.53
HOXB3-204ENST00000465120 DNAH7Q8WXX0 4024 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms