RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ZNF430Q9H8G1 570 aaPredicted RBP15.72■□□□□ 0.11
PDLIM4-205ENST00000463615 SIGLEC8Q9NYZ4 499 aa15.72■□□□□ 0.11
PDLIM4-205ENST00000463615 PEF1Q9UBV8 284 aaKnown RBP15.72■□□□□ 0.11
PDLIM4-205ENST00000463615 MRPS7Q9Y2R9 242 aaKnown RBP15.72■□□□□ 0.11
PDLIM4-205ENST00000463615 TRBV9A0A0B4J1U6 114 aa15.71■□□□□ 0.11
PDLIM4-205ENST00000463615 FCGR3BO75015 233 aa15.71■□□□□ 0.11
PDLIM4-205ENST00000463615 RPL30P62888 115 aaKnown RBP15.71■□□□□ 0.11
PDLIM4-205ENST00000463615 TNXAQ16473 311 aa15.71■□□□□ 0.11
PDLIM4-205ENST00000463615 IL34Q6ZMJ4 242 aa15.71■□□□□ 0.11
PDLIM4-205ENST00000463615 IDO2Q6ZQW0 420 aa15.71■□□□□ 0.11
PDLIM4-205ENST00000463615 OR9G4Q8NGQ1 327 aa15.71■□□□□ 0.11
PDLIM4-205ENST00000463615 SLC25A38Q96DW6 304 aa15.71■□□□□ 0.11
PDLIM4-205ENST00000463615 PHB2Q99623 299 aa15.71■□□□□ 0.11
PDLIM4-205ENST00000463615 SPIN2AQ99865 258 aa15.71■□□□□ 0.11
PDLIM4-205ENST00000463615 SPIN2BQ9BPZ2 258 aa15.71■□□□□ 0.11
PDLIM4-205ENST00000463615 COA4Q9NYJ1 87 aa15.71■□□□□ 0.11
PDLIM4-205ENST00000463615 FAM223BA6NKX1 122 aa15.7■□□□□ 0.1
PDLIM4-205ENST00000463615 A8MZ25 164 aa15.7■□□□□ 0.1
PDLIM4-205ENST00000463615 RBMXL2O75526 392 aaKnown RBP15.7■□□□□ 0.1
PDLIM4-205ENST00000463615 KCTD21Q4G0X4 260 aa15.7■□□□□ 0.1
PDLIM4-205ENST00000463615 SBSPONQ8IVN8 264 aa15.7■□□□□ 0.1
PDLIM4-205ENST00000463615 FAM223AQ8IWN6 122 aa15.7■□□□□ 0.1
PDLIM4-205ENST00000463615 TTC9CQ8N5M4 171 aa15.7■□□□□ 0.1
PDLIM4-205ENST00000463615 ANKRD34BA5PLL1 514 aa15.69■□□□□ 0.1
PDLIM4-205ENST00000463615 TRIM64CA6NLI5 447 aa15.69■□□□□ 0.1
PDLIM4-205ENST00000463615 CLEC2LP0C7M8 214 aa15.69■□□□□ 0.1
PDLIM4-205ENST00000463615 FRMD6-AS1P0C7T7 363 aa15.69■□□□□ 0.1
PDLIM4-205ENST00000463615 BRWD1-AS2P59051 145 aa15.69■□□□□ 0.1
PDLIM4-205ENST00000463615 ZNF66Q6ZN08 573 aa15.69■□□□□ 0.1
PDLIM4-205ENST00000463615 ANKRD13BQ86YJ7 626 aa15.69■□□□□ 0.1
PDLIM4-205ENST00000463615 PUSL1Q8N0Z8 303 aaKnown RBP15.69■□□□□ 0.1
PDLIM4-205ENST00000463615 Q8N1Y9 231 aa15.69■□□□□ 0.1
PDLIM4-205ENST00000463615 OR5H6Q8NGV6 325 aa15.69■□□□□ 0.1
PDLIM4-205ENST00000463615 OR4S2Q8NH73 311 aa15.69■□□□□ 0.1
PDLIM4-205ENST00000463615 VSTM2AQ8TAG5 236 aa15.69■□□□□ 0.1
PDLIM4-205ENST00000463615 ACOT12Q8WYK0 555 aa15.69■□□□□ 0.1
PDLIM4-205ENST00000463615 RNF167Q9H6Y7 350 aa15.69■□□□□ 0.1
PDLIM4-205ENST00000463615 J3QRK9 145 aa15.68■□□□□ 0.1
PDLIM4-205ENST00000463615 ACTL6BO94805 426 aa15.68■□□□□ 0.1
PDLIM4-205ENST00000463615 ZNF45Q02386 682 aa15.68■□□□□ 0.1
PDLIM4-205ENST00000463615 MXD1Q05195 221 aa15.68■□□□□ 0.1
PDLIM4-205ENST00000463615 HOGA1Q86XE5 327 aa15.68■□□□□ 0.1
PDLIM4-205ENST00000463615 BEST4Q8NFU0 473 aa15.68■□□□□ 0.1
PDLIM4-205ENST00000463615 SNAPC3Q92966 411 aa15.68■□□□□ 0.1
PDLIM4-205ENST00000463615 TRAV18A0A075B6X5 111 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 C3orf84H3BNL1 204 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 OR2A4O95047 310 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 TRBV12-3P01733 135 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 MAS1LP35410 378 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 RHOGP84095 191 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 TATDN3Q17R31 274 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 KLK9Q2XQG4 91 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 FAM209BQ5JX69 171 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 SLC25A42Q86VD7 318 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 MFSD4AQ8N468 514 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 TMEM167AQ8TBQ9 72 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 DCUN1D5Q9BTE7 237 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 AKIP1Q9NQ31 210 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 KLK9Q9UKQ9 250 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 SPATA2Q9UM82 520 aa15.67■□□□□ 0.1
PDLIM4-205ENST00000463615 RYR3Q15413 4870 aa15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 LOC100506127A0A0U1RQW1 187 aa15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 H0Y980 276 aa15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 MPPED1O15442 326 aa15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 KBTBD11O94819 623 aa15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 APELAP0DMC3 54 aa15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 MECP2P51608 486 aaKnown RBP15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 SYNJ2BPP57105 145 aa15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 IDNKQ5T6J7 187 aa15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 NECAP1Q8NC96 275 aa15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 ZBTB34Q8NCN2 500 aa15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 OR2A7Q96R45 310 aa15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 AUNIPQ9H7T9 357 aa15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 C19orf73Q9NVV2 129 aa15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 ZNF257Q9Y2Q1 563 aa15.66■□□□□ 0.1
PDLIM4-205ENST00000463615 TEX22C9J3V5 150 aa15.65■□□□□ 0.1
PDLIM4-205ENST00000463615 RBFOX2O43251 390 aaKnown RBP eCLIP15.65■□□□□ 0.1
PDLIM4-205ENST00000463615 CSN3P07498 182 aa15.65■□□□□ 0.1
PDLIM4-205ENST00000463615 KIR2DS2P43631 304 aa15.65■□□□□ 0.1
PDLIM4-205ENST00000463615 DEFA5Q01523 94 aa15.65■□□□□ 0.1
PDLIM4-205ENST00000463615 RPEL1Q2QD12 228 aa15.65■□□□□ 0.1
PDLIM4-205ENST00000463615 C10orf55Q5SWW7 151 aa15.65■□□□□ 0.1
PDLIM4-205ENST00000463615 HAPLN4Q86UW8 402 aa15.65■□□□□ 0.1
PDLIM4-205ENST00000463615 CROCCP3Q8IVE0 287 aa15.65■□□□□ 0.1
PDLIM4-205ENST00000463615 TCTEX1D2Q8WW35 142 aa15.65■□□□□ 0.1
PDLIM4-205ENST00000463615 RCHY1Q96PM5 261 aa15.65■□□□□ 0.1
PDLIM4-205ENST00000463615 THAP7Q9BT49 309 aaPredicted RBP15.65■□□□□ 0.1
PDLIM4-205ENST00000463615 RSRP1Q9BUV0 290 aa15.65■□□□□ 0.1
PDLIM4-205ENST00000463615 DIABLOQ9NR28 239 aa15.65■□□□□ 0.1
PDLIM4-205ENST00000463615 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.64■□□□□ 0.09
PDLIM4-205ENST00000463615 NPIPB5A8MRT5 1133 aa15.64■□□□□ 0.09
PDLIM4-205ENST00000463615 BMPR1BO00238 502 aa15.64■□□□□ 0.09
PDLIM4-205ENST00000463615 AIREO43918 545 aa15.64■□□□□ 0.09
PDLIM4-205ENST00000463615 ZNF735P0CB33 412 aa15.64■□□□□ 0.09
PDLIM4-205ENST00000463615 IGHV4-30-4P0DP06 118 aa15.64■□□□□ 0.09
PDLIM4-205ENST00000463615 FCGR2CP31995 323 aa15.64■□□□□ 0.09
PDLIM4-205ENST00000463615 CBX5P45973 191 aa15.64■□□□□ 0.09
PDLIM4-205ENST00000463615 ARPC4P59998 168 aa15.64■□□□□ 0.09
PDLIM4-205ENST00000463615 ATP5G2Q06055 141 aa15.64■□□□□ 0.09
PDLIM4-205ENST00000463615 NEDD8Q15843 81 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms