RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 VMA21Q3ZAQ7 101 aa6.65□□□□□ -1.34
HDAC9-220ENST00000461409 TMEM177Q53S58 311 aa6.65□□□□□ -1.34
HDAC9-220ENST00000461409 CASC10Q5T4H9 136 aa6.65□□□□□ -1.34
HDAC9-220ENST00000461409 TEX45Q8NA69 505 aa6.65□□□□□ -1.34
HDAC9-220ENST00000461409 OR9G4Q8NGQ1 327 aa6.65□□□□□ -1.34
HDAC9-220ENST00000461409 PHB2Q99623 299 aa6.65□□□□□ -1.34
HDAC9-220ENST00000461409 PALMDQ9NP74 551 aa6.65□□□□□ -1.34
HDAC9-220ENST00000461409 NDUFB11Q9NX14 153 aa6.65□□□□□ -1.34
HDAC9-220ENST00000461409 COA4Q9NYJ1 87 aa6.65□□□□□ -1.34
HDAC9-220ENST00000461409 PEF1Q9UBV8 284 aaKnown RBP6.65□□□□□ -1.34
HDAC9-220ENST00000461409 NKX1-2Q9UD57 310 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-220ENST00000461409 KCNK7Q9Y2U2 307 aa6.65□□□□□ -1.34
HDAC9-220ENST00000461409 A0A075B6Q4 140 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 A0A0B4J203 849 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 ANKRD34BA5PLL1 514 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 ANKRD65E5RJM6 399 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 MPPED1O15442 326 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 ACTL6BO94805 426 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 OR2A4O95047 310 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 CRYZL1O95825 349 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 OR9G9P0C7N8 305 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 PI3P19957 117 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 GALP22466 123 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 DTYMKP23919 212 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 MAP2K4P45985 399 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 SYNJ2BPP57105 145 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 UBE2KP61086 200 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 PLA2G7Q13093 441 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 PRSS8Q16651 343 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 RPEL1Q2QD12 228 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 LCN12Q6JVE5 192 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 ZNF343Q6P1L6 599 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 Q6ZS49 121 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 GTSCR1Q86UQ5 136 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 HAPLN4Q86UW8 402 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 ADAD2Q8NCV1 583 aaKnown RBP6.64□□□□□ -1.35
HDAC9-220ENST00000461409 BVESQ8NE79 360 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 OSR1Q8TAX0 266 aaPredicted RBP6.64□□□□□ -1.35
HDAC9-220ENST00000461409 NRG4Q8WWG1 115 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 SNAPC3Q92966 411 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 ISOC1Q96CN7 298 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 SPIN2AQ99865 258 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 SPIN2BQ9BPZ2 258 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 TM2D3Q9BRN9 247 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 SIGLEC8Q9NYZ4 499 aa6.64□□□□□ -1.35
HDAC9-220ENST00000461409 TRDV1A0A1B0GX56 115 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 MSGN1A6NI15 193 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 FAM223BA6NKX1 122 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 SRRM4A7MD48 611 aaKnown RBP6.63□□□□□ -1.35
HDAC9-220ENST00000461409 RAB27BO00194 218 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 AIREO43918 545 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 SCGNO76038 276 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 SLC22A5O76082 557 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 CTXN2P0C2S0 81 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 CD36P16671 472 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 RAB3BP20337 219 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 DUTP33316 252 aaKnown RBP6.63□□□□□ -1.35
HDAC9-220ENST00000461409 OR10A3P58181 314 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 DYRK1AQ13627 763 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 SSX1Q16384 188 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 TNXAQ16473 311 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 FAM209BQ5JX69 171 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 FAM223AQ8IWN6 122 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 H1FOOQ8IZA3 346 aaPredicted RBP6.63□□□□□ -1.35
HDAC9-220ENST00000461409 Q8N1Y9 231 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 Q8N402 240 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 SRSF12Q8WXF0 261 aaKnown RBP6.63□□□□□ -1.35
HDAC9-220ENST00000461409 ACOT12Q8WYK0 555 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 MAFIPQ8WZ33 124 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 DDB2Q92466 427 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 SPATA25Q9BR10 227 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 ATG5Q9H1Y0 275 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 PEMTQ9UBM1 199 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 ZNF230Q9UIE0 474 aaPredicted RBP6.63□□□□□ -1.35
HDAC9-220ENST00000461409 MRPS7Q9Y2R9 242 aaKnown RBP6.63□□□□□ -1.35
HDAC9-220ENST00000461409 PRELID3BQ9Y3B1 194 aa6.63□□□□□ -1.35
HDAC9-220ENST00000461409 TUSC2O75896 110 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 RHOGP84095 191 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 ATP5G2Q06055 141 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 CDK10Q15131 360 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 IZUMO2Q6UXV1 221 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 IL34Q6ZMJ4 242 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 IDO2Q6ZQW0 420 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 SLC25A42Q86VD7 318 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 MMD2Q8IY49 270 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 ZNF645Q8N7E2 425 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 NECAP1Q8NC96 275 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 OR2K2Q8NGT1 345 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 C5orf30Q96GV9 206 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 CNBD2Q96M20 576 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 DCUN1D5Q9BTE7 237 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 TUBA4BQ9H853 241 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 ZNF430Q9H8G1 570 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-220ENST00000461409 TENM2Q9NT68 2774 aa6.62□□□□□ -1.35
HDAC9-220ENST00000461409 LINC00473A8K010 186 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 MRPS14O60783 128 aaKnown RBP6.61□□□□□ -1.35
HDAC9-220ENST00000461409 FCGR3BO75015 233 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 TRBV12-3P01733 135 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 IFNA6P05013 189 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 CSN3P07498 182 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms