RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 ZNF57Q68EA5 555 aaPredicted RBP6.93□□□□□ -1.3
COL28A1-205ENST00000453441 ZNF818PQ6ZRF7 136 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 Q6ZSV7 163 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 CADM3Q8N126 398 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 FAM71E2Q8N5Q1 922 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 Q8N9W7 124 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 DRAXINQ8NBI3 349 aaPredicted RBP6.93□□□□□ -1.3
COL28A1-205ENST00000453441 VSTM2AQ8TAG5 236 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 TCTEX1D2Q8WW35 142 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 C5orf30Q96GV9 206 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 HARBI1Q96MB7 349 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 SLC25A21Q9BQT8 299 aaPredicted RBP6.93□□□□□ -1.3
COL28A1-205ENST00000453441 PLSCR3Q9NRY6 295 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 ZNF580Q9UK33 172 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 C14orf166Q9Y224 244 aaKnown RBP6.93□□□□□ -1.3
COL28A1-205ENST00000453441 LINC00473A8K010 186 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 RRHO14718 337 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 SHOXO15266 292 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 FCGR3BO75015 233 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 PGLYRP1O75594 196 aaPredicted RBP6.92□□□□□ -1.3
COL28A1-205ENST00000453441 HLA-DRB1P01911 266 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 FGF2P09038 288 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 IL7P13232 177 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 RPA2P15927 270 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 F2RP25116 425 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 TAS2R31P59538 309 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 UBE2KP61086 200 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 RPS16P62249 146 aaKnown RBP6.92□□□□□ -1.3
COL28A1-205ENST00000453441 C5orf64Q2M2E5 130 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 SCGB2B2Q4G0G5 96 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 LIN54Q6MZP7 749 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 GLDNQ6ZMI3 551 aaPredicted RBP6.92□□□□□ -1.3
COL28A1-205ENST00000453441 IDO2Q6ZQW0 420 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 KRTAP19-1Q8IUB9 90 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 FOXRED2Q8IWF2 684 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 OR4D10Q8NGI6 311 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 OR51S1Q8NGJ8 323 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 GON7Q9BXV9 100 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 ZNF702PQ9H963 129 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 PLEKHA2Q9HB19 425 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 HRASLSQ9HDD0 168 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 SLC2A9Q9NRM0 540 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 MCUBQ9NWR8 336 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 COMMD9Q9P000 198 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 COPZ2Q9P299 210 aa6.92□□□□□ -1.3
COL28A1-205ENST00000453441 PEX14O75381 377 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 ATG12O94817 140 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 CRYZL1O95825 349 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 HPRT1P00492 218 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 IGHG2P01859 326 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 IGKV1-16P04430 117 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 AMY1AP04745 511 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 VDAC2P45880 294 aaPredicted RBP6.91□□□□□ -1.3
COL28A1-205ENST00000453441 RPL30P62888 115 aaKnown RBP6.91□□□□□ -1.3
COL28A1-205ENST00000453441 SRSF2Q01130 221 aaKnown RBP6.91□□□□□ -1.3
COL28A1-205ENST00000453441 PLGLAQ15195 96 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 PSG5Q15238 335 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 BAK1Q16611 211 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 POU2AF1Q16633 256 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 AWAT1Q58HT5 328 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 C12orf54Q6X4T0 127 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 SLC35E3Q7Z769 313 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 SPAG16Q8N0X2 631 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 TEX45Q8NA69 505 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 OR13C8Q8NGS7 320 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 OR4A5Q8NH83 315 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 SPATA3Q8NHX4 192 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 LINC01006Q8NI28 216 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 SDHCQ99643 169 aaPredicted RBP6.91□□□□□ -1.3
COL28A1-205ENST00000453441 PRR13Q9NZ81 148 aa6.91□□□□□ -1.3
COL28A1-205ENST00000453441 H0Y980 276 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 AP4M1O00189 453 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 MPPED1O15442 326 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 TNFSF12O43508 249 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 RLN1P04808 185 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 IGF1P05019 195 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 NQO2P16083 231 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 MAS1LP35410 378 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 F2RL1P55085 397 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 PIGPP57054 158 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 PROK1P58294 105 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 ERVK-16P61578 105 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 BLCAPP62952 87 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 SLC35B1P78383 322 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 RBMS2Q15434 407 aaKnown RBP6.9□□□□□ -1.3
COL28A1-205ENST00000453441 PHLDA2Q53GA4 152 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 LCE3BQ5TA77 95 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 TBC1D26Q86UD7 250 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 PPP1R27Q86WC6 154 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 COMMD1Q8N668 190 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 OR51H1Q8NH63 302 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 MARCH1Q8TCQ1 289 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 CHPT1Q8WUD6 406 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 METTL1Q9UBP6 276 aaKnown RBP6.9□□□□□ -1.3
COL28A1-205ENST00000453441 GPR132Q9UNW8 380 aa6.9□□□□□ -1.3
COL28A1-205ENST00000453441 SLC25A17O43808 307 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 ACTL6BO94805 426 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 OR2A4O95047 310 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 IGLV2-23P01705 113 aa6.89□□□□□ -1.31
COL28A1-205ENST00000453441 SERPINE2P07093 398 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms