RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 IGHV1-2P23083 117 aa8.68□□□□□ -1.02
SCN10A-201ENST00000449082 MEOX2P50222 304 aa8.68□□□□□ -1.02
SCN10A-201ENST00000449082 NRIP2Q9BQI9 281 aa8.68□□□□□ -1.02
SCN10A-201ENST00000449082 IGLV3-12A0A075B6K2 115 aa8.68□□□□□ -1.02
SCN10A-201ENST00000449082 NDUFB4O95168 129 aa8.68□□□□□ -1.02
SCN10A-201ENST00000449082 IBA57Q5T440 356 aaKnown RBP8.68□□□□□ -1.02
SCN10A-201ENST00000449082 ZNF818PQ6ZRF7 136 aa8.68□□□□□ -1.02
SCN10A-201ENST00000449082 DRAM1Q8N682 238 aa8.68□□□□□ -1.02
SCN10A-201ENST00000449082 PHLDA3Q9Y5J5 127 aa8.68□□□□□ -1.02
SCN10A-201ENST00000449082 KCNAB3O43448 404 aa8.68□□□□□ -1.02
SCN10A-201ENST00000449082 OR51M1Q9H341 326 aa8.68□□□□□ -1.02
SCN10A-201ENST00000449082 TRGV3P03979 118 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 CX3CL1P78423 397 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 GALNT14Q96FL9 552 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 IGKV3D-15A0A087WSY6 115 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 TGFBR3LH3BV60 316 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 M0R3E3 92 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 IGKV3-15P01624 115 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 ASPHD2Q6ICH7 369 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 SGMS2Q8NHU3 365 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 MIEN1Q9BRT3 115 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 CCDC88CQ9P219 2028 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 PSME4Q14997 1843 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 NPIPB9F8W1W9 429 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 HKR1P10072 659 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 POC1AQ8NBT0 407 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 SMIM8Q96KF7 97 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 PATJQ8NI35 1801 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 GREB1LQ9C091 1923 aaPredicted RBP8.67□□□□□ -1.02
SCN10A-201ENST00000449082 MTCL1Q9Y4B5 1905 aaKnown RBP8.67□□□□□ -1.02
SCN10A-201ENST00000449082 GPX1P07203 203 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 C9orf106Q8NAJ2 232 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 LOC102723996A0A087X1L8 192 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 VKORC1L1Q8N0U8 176 aa8.67□□□□□ -1.02
SCN10A-201ENST00000449082 MRPL32Q9BYC8 188 aaKnown RBP8.67□□□□□ -1.02
SCN10A-201ENST00000449082 PTBP3O95758 552 aaKnown RBP8.66□□□□□ -1.02
SCN10A-201ENST00000449082 ANOS1P23352 680 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.66□□□□□ -1.02
SCN10A-201ENST00000449082 GPHA2Q96T91 129 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 C1QTNF5Q9BXJ0 243 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 DNAJC13O75165 2243 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 RPS11P62280 158 aaKnown RBP eCLIP8.66□□□□□ -1.02
SCN10A-201ENST00000449082 ZFP36L1Q07352 338 aaKnown RBP8.66□□□□□ -1.02
SCN10A-201ENST00000449082 FAM90A1Q86YD7 464 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 CYB561D1Q8N8Q1 229 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 C5orf66Q9H5L9 145 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 CKS2P33552 79 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 MEF2CQ06413 473 aaPredicted RBP8.66□□□□□ -1.02
SCN10A-201ENST00000449082 WDR25Q64LD2 544 aaPredicted RBP8.66□□□□□ -1.02
SCN10A-201ENST00000449082 OR1N2Q8NGR9 330 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 NPDC1Q9NQX5 325 aaPredicted RBP8.66□□□□□ -1.02
SCN10A-201ENST00000449082 A0A0G2JLM5 398 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 CD99P14209 185 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 MEF2BQ02080 365 aaPredicted RBP8.66□□□□□ -1.02
SCN10A-201ENST00000449082 CD300CQ08708 224 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 TMEM187Q14656 261 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 OSR1Q8TAX0 266 aaPredicted RBP8.66□□□□□ -1.02
SCN10A-201ENST00000449082 ZFP30Q9Y2G7 519 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 LINC00862A6NCI5 91 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 FAM3BP58499 235 aaPredicted RBP8.66□□□□□ -1.02
SCN10A-201ENST00000449082 PACRGQ96M98 296 aaPredicted RBP8.66□□□□□ -1.02
SCN10A-201ENST00000449082 PRO1933Q9H354 126 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 C7orf69Q9H7B7 122 aa8.66□□□□□ -1.02
SCN10A-201ENST00000449082 C17orf100A8MU93 164 aa8.65□□□□□ -1.02
SCN10A-201ENST00000449082 MT-ND6P03923 174 aa8.65□□□□□ -1.02
SCN10A-201ENST00000449082 BTF3P20290 206 aaKnown RBP8.65□□□□□ -1.02
SCN10A-201ENST00000449082 LHX2P50458 406 aa8.65□□□□□ -1.02
SCN10A-201ENST00000449082 CBLN2Q8IUK8 224 aa8.65□□□□□ -1.02
SCN10A-201ENST00000449082 HSPB1P04792 205 aaKnown RBP8.65□□□□□ -1.02
SCN10A-201ENST00000449082 CXCL2P19875 107 aa8.65□□□□□ -1.02
SCN10A-201ENST00000449082 RPL39P5Q59GN2 51 aa8.65□□□□□ -1.02
SCN10A-201ENST00000449082 SPACA3Q8IXA5 215 aa8.65□□□□□ -1.02
SCN10A-201ENST00000449082 ZNF418Q8TF45 676 aaPredicted RBP8.65□□□□□ -1.02
SCN10A-201ENST00000449082 NPIPB3Q92617 1050 aa8.65□□□□□ -1.02
SCN10A-201ENST00000449082 RTN4RQ9BZR6 473 aa8.65□□□□□ -1.02
SCN10A-201ENST00000449082 YAE1D1Q9NRH1 226 aa8.65□□□□□ -1.02
SCN10A-201ENST00000449082 IQCF6A8MYZ5 107 aa8.65□□□□□ -1.02
SCN10A-201ENST00000449082 NCMAPQ5T1S8 102 aa8.65□□□□□ -1.02
SCN10A-201ENST00000449082 OR4X2Q8NGF9 303 aa8.65□□□□□ -1.02
SCN10A-201ENST00000449082 TGFAP01135 160 aa8.65□□□□□ -1.03
SCN10A-201ENST00000449082 HERPUD1Q15011 391 aa8.65□□□□□ -1.03
SCN10A-201ENST00000449082 AQP10Q96PS8 301 aa8.65□□□□□ -1.03
SCN10A-201ENST00000449082 TUBA4BQ9H853 241 aa8.65□□□□□ -1.03
SCN10A-201ENST00000449082 RALGAPA2Q2PPJ7 1873 aa8.65□□□□□ -1.03
SCN10A-201ENST00000449082 IL4P05112 153 aa8.65□□□□□ -1.03
SCN10A-201ENST00000449082 CBLN4Q9NTU7 201 aa8.65□□□□□ -1.03
SCN10A-201ENST00000449082 ELF5Q9UKW6 265 aaPredicted RBP8.65□□□□□ -1.03
SCN10A-201ENST00000449082 ZNF324O75467 553 aaPredicted RBP8.64□□□□□ -1.03
SCN10A-201ENST00000449082 EFEMP2O95967 443 aa8.64□□□□□ -1.03
SCN10A-201ENST00000449082 IGKV1D-33P01593 117 aa8.64□□□□□ -1.03
SCN10A-201ENST00000449082 IGKV1-33P01594 117 aa8.64□□□□□ -1.03
SCN10A-201ENST00000449082 CD74P04233 296 aa8.64□□□□□ -1.03
SCN10A-201ENST00000449082 CD59P13987 128 aa8.64□□□□□ -1.03
SCN10A-201ENST00000449082 NUTF2P61970 127 aaKnown RBP8.64□□□□□ -1.03
SCN10A-201ENST00000449082 PSG7Q13046 419 aa8.64□□□□□ -1.03
SCN10A-201ENST00000449082 PEAR1Q5VY43 1037 aaPredicted RBP8.64□□□□□ -1.03
SCN10A-201ENST00000449082 SIGIRRQ6IA17 410 aa8.64□□□□□ -1.03
SCN10A-201ENST00000449082 PET117Q6UWS5 81 aa8.64□□□□□ -1.03
SCN10A-201ENST00000449082 CKAP5Q14008 2032 aa8.64□□□□□ -1.03
SCN10A-201ENST00000449082 ANKRD36A6QL64 1941 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms