RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 RBFOX2O43251 390 aaKnown RBP eCLIP12.61□□□□□ -0.39
USP39-205ENST00000442708 CA2P00918 260 aa12.61□□□□□ -0.39
USP39-205ENST00000442708 SAA1P0DJI8 122 aaPredicted RBP12.61□□□□□ -0.39
USP39-205ENST00000442708 CD28P10747 220 aa12.61□□□□□ -0.39
USP39-205ENST00000442708 KIR2DS2P43631 304 aa12.61□□□□□ -0.39
USP39-205ENST00000442708 UBE2KP61086 200 aa12.61□□□□□ -0.39
USP39-205ENST00000442708 CATR1Q13166 79 aa12.61□□□□□ -0.39
USP39-205ENST00000442708 TCTEX1D4Q5JR98 221 aa12.61□□□□□ -0.39
USP39-205ENST00000442708 SHISA2Q6UWI4 295 aa12.61□□□□□ -0.39
USP39-205ENST00000442708 CMTM1Q8IZ96 169 aa12.61□□□□□ -0.39
USP39-205ENST00000442708 STPG2Q8N412 459 aa12.61□□□□□ -0.39
USP39-205ENST00000442708 OR51J1Q9H342 316 aa12.61□□□□□ -0.39
USP39-205ENST00000442708 MCUBQ9NWR8 336 aa12.61□□□□□ -0.39
USP39-205ENST00000442708 VWFP04275 2813 aa12.61□□□□□ -0.39
USP39-205ENST00000442708 S1PR2O95136 353 aa12.6□□□□□ -0.39
USP39-205ENST00000442708 IGF1P05019 195 aa12.6□□□□□ -0.39
USP39-205ENST00000442708 F2RP25116 425 aa12.6□□□□□ -0.39
USP39-205ENST00000442708 RND3P61587 244 aa12.6□□□□□ -0.39
USP39-205ENST00000442708 LINC00299Q6ZSB3 139 aa12.6□□□□□ -0.39
USP39-205ENST00000442708 CENPVQ7Z7K6 275 aaPredicted RBP12.6□□□□□ -0.39
USP39-205ENST00000442708 ZNF329Q86UD4 541 aa12.6□□□□□ -0.39
USP39-205ENST00000442708 PPP1R27Q86WC6 154 aa12.6□□□□□ -0.39
USP39-205ENST00000442708 TEX45Q8NA69 505 aa12.6□□□□□ -0.39
USP39-205ENST00000442708 OR5AU1Q8NGC0 362 aa12.6□□□□□ -0.39
USP39-205ENST00000442708 RTBDNQ9BSG5 229 aaPredicted RBP12.6□□□□□ -0.39
USP39-205ENST00000442708 PARP11Q9NR21 331 aa12.6□□□□□ -0.39
USP39-205ENST00000442708 G3V318 75 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 AP4M1O00189 453 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 MPPED1O15442 326 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 KCNAB3O43448 404 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 IL7P13232 177 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 PIGPP57054 158 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 AP3S2P59780 193 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 CFHR3Q02985 330 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 VMA21Q3ZAQ7 101 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 ZNF57Q68EA5 555 aaPredicted RBP12.59□□□□□ -0.39
USP39-205ENST00000442708 ZNF562Q6V9R5 426 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 FOXRED2Q8IWF2 684 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 PUSL1Q8N0Z8 303 aaKnown RBP12.59□□□□□ -0.39
USP39-205ENST00000442708 ZFAND1Q8TCF1 268 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 ZNF486Q96H40 463 aaPredicted RBP12.59□□□□□ -0.39
USP39-205ENST00000442708 PRRT1Q99946 306 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 FAM103A1Q9BTL3 118 aaKnown RBP12.59□□□□□ -0.39
USP39-205ENST00000442708 C5orf66Q9H5L9 145 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 GPR132Q9UNW8 380 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 VSIG4Q9Y279 399 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 WSB1Q9Y6I7 421 aa12.59□□□□□ -0.39
USP39-205ENST00000442708 TET2Q6N021 2002 aaPredicted RBP12.59□□□□□ -0.39
USP39-205ENST00000442708 PSMB11A5LHX3 300 aa12.58□□□□□ -0.4
USP39-205ENST00000442708 HPRT1P00492 218 aa12.58□□□□□ -0.4
USP39-205ENST00000442708 IGKV1-39P01597 117 aa12.58□□□□□ -0.4
USP39-205ENST00000442708 IGKV1D-39P04432 117 aa12.58□□□□□ -0.4
USP39-205ENST00000442708 CTSDP07339 412 aaPredicted RBP12.58□□□□□ -0.4
USP39-205ENST00000442708 LPAR6P43657 344 aa12.58□□□□□ -0.4
USP39-205ENST00000442708 GNB1P62873 340 aa12.58□□□□□ -0.4
USP39-205ENST00000442708 PRSS8Q16651 343 aa12.58□□□□□ -0.4
USP39-205ENST00000442708 C19orf54Q5BKX5 351 aa12.58□□□□□ -0.4
USP39-205ENST00000442708 SSX9Q7RTT3 188 aa12.58□□□□□ -0.4
USP39-205ENST00000442708 CHPT1Q8WUD6 406 aa12.58□□□□□ -0.4
USP39-205ENST00000442708 RHOVQ96L33 236 aa12.58□□□□□ -0.4
USP39-205ENST00000442708 TP53RKQ96S44 253 aa12.58□□□□□ -0.4
USP39-205ENST00000442708 ZNF430Q9H8G1 570 aaPredicted RBP12.58□□□□□ -0.4
USP39-205ENST00000442708 PLEKHA2Q9HB19 425 aa12.58□□□□□ -0.4
USP39-205ENST00000442708 PKD1L1Q8TDX9 2849 aa12.58□□□□□ -0.4
USP39-205ENST00000442708 LINC00854A0A1B0GVQ3 168 aa12.57□□□□□ -0.4
USP39-205ENST00000442708 FBXO24O75426 580 aa12.57□□□□□ -0.4
USP39-205ENST00000442708 HRASP01112 189 aa12.57□□□□□ -0.4
USP39-205ENST00000442708 RPA2P15927 270 aa12.57□□□□□ -0.4
USP39-205ENST00000442708 FAUP35544 74 aaKnown RBP12.57□□□□□ -0.4
USP39-205ENST00000442708 CRIP2P52943 208 aaPredicted RBP12.57□□□□□ -0.4
USP39-205ENST00000442708 TAS2R31P59538 309 aa12.57□□□□□ -0.4
USP39-205ENST00000442708 FXYD3Q14802 87 aa12.57□□□□□ -0.4
USP39-205ENST00000442708 SURF2Q15527 256 aaPredicted RBP12.57□□□□□ -0.4
USP39-205ENST00000442708 TRIQKQ629K1 86 aa12.57□□□□□ -0.4
USP39-205ENST00000442708 POC5Q8NA72 575 aa12.57□□□□□ -0.4
USP39-205ENST00000442708 ADAD2Q8NCV1 583 aaKnown RBP12.57□□□□□ -0.4
USP39-205ENST00000442708 CD300LFQ8TDQ1 290 aa12.57□□□□□ -0.4
USP39-205ENST00000442708 CITED2Q99967 270 aaPredicted RBP12.57□□□□□ -0.4
USP39-205ENST00000442708 SCP2D1Q9UJQ7 156 aa12.57□□□□□ -0.4
USP39-205ENST00000442708 ZNF580Q9UK33 172 aa12.57□□□□□ -0.4
USP39-205ENST00000442708 NUBP2Q9Y5Y2 271 aa12.57□□□□□ -0.4
USP39-205ENST00000442708 NBEAL1Q6ZS30 2694 aa12.57□□□□□ -0.4
USP39-205ENST00000442708 TRAV3A0A0B4J244 114 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 ADARB2-AS1A8MUL3 147 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 PLA2G10O15496 165 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 KBTBD11O94819 623 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 OR2A4O95047 310 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 IL6RP08887 468 aaPredicted RBP12.56□□□□□ -0.4
USP39-205ENST00000442708 MYOD1P15172 320 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 S100GP29377 79 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 PPIFP30405 207 aaKnown RBP12.56□□□□□ -0.4
USP39-205ENST00000442708 BTCP35070 178 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 ECI1P42126 302 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 CD83Q01151 205 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 POU2AF1Q16633 256 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 SP6Q3SY56 376 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 C10orf55Q5SWW7 151 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 OR4A47Q6IF82 309 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 TCTEX1D1Q8N7M0 179 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 GRPEL2Q8TAA5 225 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms