RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 CLCF1Q9UBD9 225 aa12.78□□□□□ -0.36
APP-208ENST00000439274 CFAP47Q6ZTR5 3102 aa12.78□□□□□ -0.36
APP-208ENST00000439274 ZNF318Q5VUA4 2279 aa12.78□□□□□ -0.36
APP-208ENST00000439274 A0A1B0GV90 55 aa12.78□□□□□ -0.36
APP-208ENST00000439274 C15orf65H3BRN8 121 aa12.78□□□□□ -0.36
APP-208ENST00000439274 DVL1O14640 695 aa12.78□□□□□ -0.36
APP-208ENST00000439274 GGCTO75223 188 aaKnown RBP12.78□□□□□ -0.36
APP-208ENST00000439274 NDUFB4O95168 129 aa12.78□□□□□ -0.36
APP-208ENST00000439274 SOX8P57073 446 aa12.78□□□□□ -0.36
APP-208ENST00000439274 HES3Q5TGS1 186 aa12.78□□□□□ -0.36
APP-208ENST00000439274 LINC01551Q86U37 167 aa12.78□□□□□ -0.36
APP-208ENST00000439274 PRR7Q8TB68 274 aa12.78□□□□□ -0.36
APP-208ENST00000439274 WDR83OSQ9Y284 106 aa12.78□□□□□ -0.36
APP-208ENST00000439274 C1QTNF9P0C862 333 aa12.77□□□□□ -0.37
APP-208ENST00000439274 DUTP33316 252 aaKnown RBP12.77□□□□□ -0.37
APP-208ENST00000439274 GPR12P47775 334 aa12.77□□□□□ -0.37
APP-208ENST00000439274 REC114Q7Z4M0 266 aa12.77□□□□□ -0.37
APP-208ENST00000439274 LRRC29Q8WV35 223 aa12.77□□□□□ -0.37
APP-208ENST00000439274 LURAP1Q96LR2 239 aa12.77□□□□□ -0.37
APP-208ENST00000439274 WASF3Q9UPY6 502 aa12.77□□□□□ -0.37
APP-208ENST00000439274 TRAV3A0A0B4J244 114 aa12.77□□□□□ -0.37
APP-208ENST00000439274 ZNF705GA8MUZ8 300 aaPredicted RBP12.77□□□□□ -0.37
APP-208ENST00000439274 RRHO14718 337 aa12.77□□□□□ -0.37
APP-208ENST00000439274 IFNA10P01566 189 aa12.77□□□□□ -0.37
APP-208ENST00000439274 IGKV3-15P01624 115 aa12.77□□□□□ -0.37
APP-208ENST00000439274 CECR9P0C854 216 aa12.77□□□□□ -0.37
APP-208ENST00000439274 SMIM21Q3B7S5 101 aa12.77□□□□□ -0.37
APP-208ENST00000439274 RPL39P5Q59GN2 51 aa12.77□□□□□ -0.37
APP-208ENST00000439274 COA6Q5JTJ3 125 aaKnown RBP12.77□□□□□ -0.37
APP-208ENST00000439274 PRAMEF5Q5TYX0 476 aa12.77□□□□□ -0.37
APP-208ENST00000439274 TMEM178AQ8NBL3 297 aa12.77□□□□□ -0.37
APP-208ENST00000439274 RNASEH2CQ8TDP1 164 aaKnown RBP12.77□□□□□ -0.37
APP-208ENST00000439274 HCFC1P51610 2035 aa12.77□□□□□ -0.37
APP-208ENST00000439274 SPINT2O43291 252 aa12.76□□□□□ -0.37
APP-208ENST00000439274 VENTXO95231 258 aa12.76□□□□□ -0.37
APP-208ENST00000439274 IL3RAP26951 378 aa12.76□□□□□ -0.37
APP-208ENST00000439274 HOXC12P31275 282 aa12.76□□□□□ -0.37
APP-208ENST00000439274 DIRC2Q96SL1 478 aa12.76□□□□□ -0.37
APP-208ENST00000439274 GNG12Q9UBI6 72 aa12.76□□□□□ -0.37
APP-208ENST00000439274 HNF1AP20823 631 aa12.76□□□□□ -0.37
APP-208ENST00000439274 SRP14P37108 136 aaKnown RBP12.76□□□□□ -0.37
APP-208ENST00000439274 UTF1Q5T230 341 aa12.76□□□□□ -0.37
APP-208ENST00000439274 ZNF664Q8N3J9 261 aa12.76□□□□□ -0.37
APP-208ENST00000439274 TCTEX1D1Q8N7M0 179 aa12.76□□□□□ -0.37
APP-208ENST00000439274 PARD6AQ9NPB6 346 aa12.76□□□□□ -0.37
APP-208ENST00000439274 A0A1B0GUS0 222 aa12.75□□□□□ -0.37
APP-208ENST00000439274 A0A1W2PPV4 95 aa12.75□□□□□ -0.37
APP-208ENST00000439274 M0R1X1 148 aa12.75□□□□□ -0.37
APP-208ENST00000439274 PRDX2P32119 198 aa12.75□□□□□ -0.37
APP-208ENST00000439274 KIR2DL2P43627 348 aaPredicted RBP12.75□□□□□ -0.37
APP-208ENST00000439274 TNFSF10P50591 281 aa12.75□□□□□ -0.37
APP-208ENST00000439274 TREML4Q6UXN2 200 aa12.75□□□□□ -0.37
APP-208ENST00000439274 C9orf106Q8NAJ2 232 aa12.75□□□□□ -0.37
APP-208ENST00000439274 ACY3Q96HD9 319 aa12.75□□□□□ -0.37
APP-208ENST00000439274 HEYLQ9NQ87 328 aaPredicted RBP12.75□□□□□ -0.37
APP-208ENST00000439274 IGHV3OR15-7A0A075B7D8 119 aa12.75□□□□□ -0.37
APP-208ENST00000439274 SOX15O60248 233 aa12.75□□□□□ -0.37
APP-208ENST00000439274 RNF224P0DH78 156 aa12.75□□□□□ -0.37
APP-208ENST00000439274 ARL14EPLP0DKL9 152 aa12.75□□□□□ -0.37
APP-208ENST00000439274 PDLIM4P50479 330 aa12.75□□□□□ -0.37
APP-208ENST00000439274 SRSF6Q13247 344 aaKnown RBP12.75□□□□□ -0.37
APP-208ENST00000439274 MIC13Q5XKP0 118 aa12.75□□□□□ -0.37
APP-208ENST00000439274 ALKBH2Q6NS38 261 aa12.75□□□□□ -0.37
APP-208ENST00000439274 ABHD12Q8N2K0 398 aa12.75□□□□□ -0.37
APP-208ENST00000439274 OR4A16Q8NH70 328 aa12.75□□□□□ -0.37
APP-208ENST00000439274 MS4A5Q9H3V2 200 aa12.75□□□□□ -0.37
APP-208ENST00000439274 TRBV20OR9-2A0A075B6H5 130 aa12.74□□□□□ -0.37
APP-208ENST00000439274 A0A0U1RQK1 487 aa12.74□□□□□ -0.37
APP-208ENST00000439274 ZNF320A2RRD8 509 aa12.74□□□□□ -0.37
APP-208ENST00000439274 TYMSP04818 313 aa12.74□□□□□ -0.37
APP-208ENST00000439274 ZNF134P52741 427 aa12.74□□□□□ -0.37
APP-208ENST00000439274 KCNIP4Q6PIL6 250 aa12.74□□□□□ -0.37
APP-208ENST00000439274 CISD2Q8N5K1 135 aaKnown RBP12.74□□□□□ -0.37
APP-208ENST00000439274 MGST2Q99735 147 aa12.74□□□□□ -0.37
APP-208ENST00000439274 TET2Q6N021 2002 aaPredicted RBP12.74□□□□□ -0.37
APP-208ENST00000439274 ZNF891A8MT65 544 aaPredicted RBP12.73□□□□□ -0.37
APP-208ENST00000439274 RBFOX2O43251 390 aaKnown RBP eCLIP12.73□□□□□ -0.373e-13■□□□□ 10.4
APP-208ENST00000439274 PDE6DO43924 150 aa12.73□□□□□ -0.37
APP-208ENST00000439274 HTD2P86397 168 aa12.73□□□□□ -0.37
APP-208ENST00000439274 GUSBP1Q15486 140 aa12.73□□□□□ -0.37
APP-208ENST00000439274 MORN2Q502X0 79 aa12.73□□□□□ -0.37
APP-208ENST00000439274 OR2Z1Q8NG97 314 aa12.73□□□□□ -0.37
APP-208ENST00000439274 LEAP2Q969E1 77 aa12.73□□□□□ -0.37
APP-208ENST00000439274 DUSP13Q9UII6 198 aa12.73□□□□□ -0.37
APP-208ENST00000439274 IGKV1D-17A0A075B6S4 117 aa12.73□□□□□ -0.37
APP-208ENST00000439274 AQP7O14520 342 aa12.73□□□□□ -0.37
APP-208ENST00000439274 ADH4P08319 380 aa12.73□□□□□ -0.37
APP-208ENST00000439274 PAX1P15863 534 aa12.73□□□□□ -0.37
APP-208ENST00000439274 KITLGP21583 273 aa12.73□□□□□ -0.37
APP-208ENST00000439274 GCH1P30793 250 aa12.73□□□□□ -0.37
APP-208ENST00000439274 SPRNQ5BIV9 151 aa12.73□□□□□ -0.37
APP-208ENST00000439274 C1orf229Q6ZS94 237 aaPredicted RBP12.73□□□□□ -0.37
APP-208ENST00000439274 SSMEM1Q8WWF3 244 aa12.73□□□□□ -0.37
APP-208ENST00000439274 HEATR1Q9H583 2144 aaKnown RBP12.73□□□□□ -0.37
APP-208ENST00000439274 HPRT1P00492 218 aa12.72□□□□□ -0.37
APP-208ENST00000439274 SNRPCP09234 159 aaKnown RBP12.72□□□□□ -0.37
APP-208ENST00000439274 VDAC2P45880 294 aaPredicted RBP12.72□□□□□ -0.37
APP-208ENST00000439274 CCL11P51671 97 aa12.72□□□□□ -0.37
APP-208ENST00000439274 SPCS3P61009 180 aa12.72□□□□□ -0.37
APP-208ENST00000439274 ZNF718Q3SXZ3 478 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms