RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 RSL24D1Q9UHA3 163 aaKnown RBP1.8□□□□□ -2.12
CLK1-204ENST00000432425 PCYOX1Q9UHG3 505 aa1.8□□□□□ -2.12
CLK1-204ENST00000432425 ZNF835Q9Y2P0 537 aa1.8□□□□□ -2.12
CLK1-204ENST00000432425 DENND4BO75064 1496 aaPredicted RBP1.8□□□□□ -2.12
CLK1-204ENST00000432425 KDM5AP29375 1690 aaKnown RBP1.8□□□□□ -2.12
CLK1-204ENST00000432425 CCDC88AQ3V6T2 1871 aa1.8□□□□□ -2.12
CLK1-204ENST00000432425 ZNF608Q9ULD9 1512 aaPredicted RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 ABCC12Q96J65 1359 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 FANCMQ8IYD8 2048 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 PLCH2O75038 1416 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 MYH7BA7E2Y1 1941 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 BORCS7-ASMTA0A0B4J1R7 106 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 TRAV8-2A0A0B4J237 113 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 TRAV26-2A0A0B4J265 109 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 A0A0X1KG70 313 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 TEX50A0A1B0GTY4 177 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 DUXBA0A1W2PPF3 345 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 A6NDN8 102 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 FABP5P3A8MUU1 101 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 C9JAW5 83 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 CLDN25C9JDP6 229 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 D6RAR5 112 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 H7C1C5 153 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 COPEO14579 308 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 GADD45GO95257 159 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 IGHMP01871 453 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 HIST1H1BP16401 226 aaKnown RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 NTF3P20783 257 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 PSMB9P28065 219 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 AGTR1P30556 359 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 CD70P32970 193 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 GABRA2P47869 451 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 NMUP48645 174 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 H2BFSP57053 126 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 NCS1P62166 190 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 LCN6P62502 163 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 RPS25P62851 125 aaKnown RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 MRPS10P82664 201 aaKnown RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 TNFAIP6P98066 277 aaPredicted RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 IAH1Q2TAA2 248 aaPredicted RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 SCGB2B2Q4G0G5 96 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 HSD17B12Q53GQ0 312 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 IBA57Q5T440 356 aaKnown RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 STEAP4Q687X5 459 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 RASL11AQ6T310 242 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 LINC00173Q6ZV60 143 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 ZNF571Q7Z3V5 609 aaPredicted RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 CTAGE3PQ8IX95 158 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 C8orf59Q8N0T1 100 aaPredicted RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 KRTCAP2Q8N6L1 136 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 SLC35G3Q8N808 338 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 GDPD1Q8N9F7 314 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 SLC7A6Q92536 515 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 ISOC1Q96CN7 298 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 AURKBQ96GD4 344 aaPredicted RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 ZC2HC1AQ96GY0 325 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 SLC25A44Q96H78 314 aaPredicted RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 CARD19Q96LW7 228 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 SPIN2AQ99865 258 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 SPIN2BQ9BPZ2 258 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 NAA38Q9BRA0 125 aaKnown RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 LXNQ9BS40 222 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 TMEM147Q9BVK8 224 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 NKX6-2Q9C056 277 aaPredicted RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 OR2H1Q9GZK4 316 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 SRMSQ9H3Y6 488 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 HES4Q9HCC6 221 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 GPR84Q9NQS5 396 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 RBFOX1Q9NWB1 397 aaKnown RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 MRPL16Q9NX20 251 aaKnown RBP1.79□□□□□ -2.12
CLK1-204ENST00000432425 XCL2Q9UBD3 114 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 SLC23A2Q9UGH3 650 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 DNAJC12Q9UKB3 198 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 SNX12Q9UMY4 172 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 HIGD1AQ9Y241 93 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 ZSWIM8A7E2V4 1837 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 RTL1A6NKG5 1358 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 TSPOAP1O95153 1857 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 NUP210LQ5VU65 1888 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 ROBO3Q96MS0 1386 aa1.79□□□□□ -2.12
CLK1-204ENST00000432425 MYH6P13533 1939 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 NPHP4O75161 1426 aaPredicted RBP1.78□□□□□ -2.12
CLK1-204ENST00000432425 SSH2Q76I76 1423 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 DOCK4Q8N1I0 1966 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 ANKRD26Q9UPS8 1709 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 MED14O60244 1454 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 ARHGAP35Q9NRY4 1499 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 TRAV8-6A0A0B4J262 113 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 LOC107984640A0A0U1RRK4 108 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 SIGLEC16A6NMB1 481 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.78□□□□□ -2.12
CLK1-204ENST00000432425 H3BQF6 201 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 I3L4J1 428 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 I3L521 148 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 M0R2Z0 102 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 NDUFS5O43920 106 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 PDCD6O75340 191 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 CXorf1O96002 111 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 OPN1SWP03999 348 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 SERPINE1P05121 402 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms