RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 DAPK2Q9UIK4 370 aa13.02□□□□□ -0.33
TRIM39-209ENST00000428728 OR2W1Q9Y3N9 320 aa13.02□□□□□ -0.33
TRIM39-209ENST00000428728 IGKV1D-13A0A0B4J2D9 117 aa13.01□□□□□ -0.33
TRIM39-209ENST00000428728 H0Y980 276 aa13.01□□□□□ -0.33
TRIM39-209ENST00000428728 CREBL2O60519 120 aaPredicted RBP13.01□□□□□ -0.33
TRIM39-209ENST00000428728 IGKV1-13P0DP09 117 aa13.01□□□□□ -0.33
TRIM39-209ENST00000428728 CD36P16671 472 aa13.01□□□□□ -0.33
TRIM39-209ENST00000428728 GNG2P59768 71 aa13.01□□□□□ -0.33
TRIM39-209ENST00000428728 RPL30P62888 115 aaKnown RBP13.01□□□□□ -0.33
TRIM39-209ENST00000428728 ZNF45Q02386 682 aa13.01□□□□□ -0.33
TRIM39-209ENST00000428728 UBE2UQ5VVX9 321 aa13.01□□□□□ -0.33
TRIM39-209ENST00000428728 PALMDQ9NP74 551 aa13.01□□□□□ -0.33
TRIM39-209ENST00000428728 C19orf73Q9NVV2 129 aa13.01□□□□□ -0.33
TRIM39-209ENST00000428728 MRPS7Q9Y2R9 242 aaKnown RBP13.01□□□□□ -0.33
TRIM39-209ENST00000428728 RBMX2Q9Y388 322 aaKnown RBP13.01□□□□□ -0.33
TRIM39-209ENST00000428728 PRELID3BQ9Y3B1 194 aa13.01□□□□□ -0.33
TRIM39-209ENST00000428728 FAM223BA6NKX1 122 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 OR2A4O95047 310 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 CSN3P07498 182 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 LYL1P12980 280 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 FGF9P31371 208 aaPredicted RBP13□□□□□ -0.33
TRIM39-209ENST00000428728 TATDN3Q17R31 274 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 LCN12Q6JVE5 192 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 GTSCR1Q86UQ5 136 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 FAM223AQ8IWN6 122 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 MMD2Q8IY49 270 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 VKORC1L1Q8N0U8 176 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 SPARTQ8N0X7 666 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 TCTEX1D2Q8WW35 142 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 SNAPC3Q92966 411 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 SPIN2AQ99865 258 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 SPIN2BQ9BPZ2 258 aa13□□□□□ -0.33
TRIM39-209ENST00000428728 RRP15Q9Y3B9 282 aaKnown RBP13□□□□□ -0.33
TRIM39-209ENST00000428728 RYR3Q15413 4870 aa12.99□□□□□ -0.33
TRIM39-209ENST00000428728 IZUMO1RA6ND01 250 aa12.99□□□□□ -0.33
TRIM39-209ENST00000428728 BMPR1BO00238 502 aa12.99□□□□□ -0.33
TRIM39-209ENST00000428728 MRPS14O60783 128 aaKnown RBP12.99□□□□□ -0.33
TRIM39-209ENST00000428728 HLA-DQB1P01920 261 aa12.99□□□□□ -0.33
TRIM39-209ENST00000428728 CTXN2P0C2S0 81 aa12.99□□□□□ -0.33
TRIM39-209ENST00000428728 ATP5G2Q06055 141 aa12.99□□□□□ -0.33
TRIM39-209ENST00000428728 SFXN4Q6P4A7 337 aa12.99□□□□□ -0.33
TRIM39-209ENST00000428728 CITED4Q96RK1 184 aa12.99□□□□□ -0.33
TRIM39-209ENST00000428728 DCSTAMPQ9H295 470 aa12.99□□□□□ -0.33
TRIM39-209ENST00000428728 PEMTQ9UBM1 199 aa12.99□□□□□ -0.33
TRIM39-209ENST00000428728 SPATA2Q9UM82 520 aa12.99□□□□□ -0.33
TRIM39-209ENST00000428728 SSR3Q9UNL2 185 aa12.99□□□□□ -0.33
TRIM39-209ENST00000428728 HMX3A6NHT5 357 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 A8MZ25 164 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 SSX5O60225 188 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 SCGNO76038 276 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 IGLV2-14P01704 120 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 MXD1Q05195 221 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 ZFAND6Q6FIF0 208 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 CNIH2Q6PI25 160 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 C19orf35Q6ZS72 473 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 Q8N402 240 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 OR4S2Q8NH73 311 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 FCGR1BQ92637 280 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 GPHA2Q96T91 129 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 TUBA4BQ9H853 241 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 RHBDL2Q9NX52 303 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 TAS2R8Q9NYW2 309 aa12.98□□□□□ -0.33
TRIM39-209ENST00000428728 TRBV9A0A0B4J1U6 114 aa12.97□□□□□ -0.33
TRIM39-209ENST00000428728 OR2J3O76001 311 aa12.97□□□□□ -0.33
TRIM39-209ENST00000428728 SLC22A5O76082 557 aa12.97□□□□□ -0.33
TRIM39-209ENST00000428728 KBTBD11O94819 623 aa12.97□□□□□ -0.33
TRIM39-209ENST00000428728 SDC2P34741 201 aa12.97□□□□□ -0.33
TRIM39-209ENST00000428728 TPRA1Q86W33 373 aa12.97□□□□□ -0.33
TRIM39-209ENST00000428728 ISOC1Q96CN7 298 aa12.97□□□□□ -0.33
TRIM39-209ENST00000428728 HSD17B10Q99714 261 aaKnown RBP12.97□□□□□ -0.33
TRIM39-209ENST00000428728 THAP7Q9BT49 309 aaPredicted RBP12.97□□□□□ -0.33
TRIM39-209ENST00000428728 OR51E2Q9H255 320 aa12.97□□□□□ -0.33
TRIM39-209ENST00000428728 GAR1Q9NY12 217 aaKnown RBP12.97□□□□□ -0.33
TRIM39-209ENST00000428728 ANXA10Q9UJ72 324 aa12.97□□□□□ -0.33
TRIM39-209ENST00000428728 PPP5D1E7EU14 171 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 ATP6V1G2O95670 118 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 CLEC2LP0C7M8 214 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 RPL27AP46776 148 aaKnown RBP12.96□□□□□ -0.33
TRIM39-209ENST00000428728 ARPC4P59998 168 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 HAGHQ16775 308 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 C15orf32Q32M92 178 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 SSX9Q7RTT3 188 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 SLC25A42Q86VD7 318 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 TTC9CQ8N5M4 171 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 NECAP1Q8NC96 275 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 DYNLRB2Q8TF09 96 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 FYTTD1Q96QD9 318 aaKnown RBP12.96□□□□□ -0.33
TRIM39-209ENST00000428728 SPATA25Q9BR10 227 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 RNF167Q9H6Y7 350 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 PLEKHA3Q9HB20 300 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 SIGLEC8Q9NYZ4 499 aa12.96□□□□□ -0.33
TRIM39-209ENST00000428728 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.95□□□□□ -0.34
TRIM39-209ENST00000428728 LOC100506127A0A0U1RQW1 187 aa12.95□□□□□ -0.34
TRIM39-209ENST00000428728 DPPA5A6NC42 116 aa12.95□□□□□ -0.34
TRIM39-209ENST00000428728 TEX22C9J3V5 150 aa12.95□□□□□ -0.34
TRIM39-209ENST00000428728 TNFSF12O43508 249 aa12.95□□□□□ -0.34
TRIM39-209ENST00000428728 FCER2P06734 321 aa12.95□□□□□ -0.34
TRIM39-209ENST00000428728 PTHLHP12272 177 aa12.95□□□□□ -0.34
TRIM39-209ENST00000428728 EIF4EBP1Q13541 118 aaPredicted RBP12.95□□□□□ -0.34
TRIM39-209ENST00000428728 OR5H6Q8NGV6 325 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms