RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DTYMKP23919 212 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 CNTFRP26992 372 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 SOX6P35712 828 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 TGFBR1P36897 503 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 TALDO1P37837 337 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 SLC35B1P78383 322 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 TIMM50Q3ZCQ8 353 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 IGSF11Q5DX21 431 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 IDNKQ5T6J7 187 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 HACD4Q5VWC8 232 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 GLDNQ6ZMI3 551 aaPredicted RBP5.42□□□□□ -1.54
HMGN1-205ENST00000419378 Q6ZS49 121 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 COMMD1Q8N668 190 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 OR5H6Q8NGV6 325 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 OR10J5Q8NHC4 309 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 NUDCD2Q8WVJ2 157 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 PHF21AQ96BD5 680 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 SLC25A38Q96DW6 304 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 YIPF6Q96EC8 236 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 ZNF107Q9UII5 783 aaPredicted RBP5.42□□□□□ -1.54
HMGN1-205ENST00000419378 ZNF580Q9UK33 172 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 RNF150Q9ULK6 438 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 WASHC3Q9Y3C0 194 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 ETV7Q9Y603 341 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 PLXNB1O43157 2135 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 TMEM235A6NFC5 223 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 TRIM64CA6NLI5 447 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 H7C2Y5 167 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 M0R1X1 148 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 SSX5O60225 188 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 NDUFA3O95167 84 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 HLA-DRB1P01911 266 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 IGF1P05019 195 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 TFAP2AP05549 437 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 OR8U9P0C7N5 309 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 VDAC1P21796 283 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 MC5RP33032 325 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 LINC00205P59089 165 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 RPL23AP62750 156 aaKnown RBP5.41□□□□□ -1.54
HMGN1-205ENST00000419378 SRSF7Q16629 238 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGN1-205ENST00000419378 PNLIPRP3Q17RR3 467 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 C5orf64Q2M2E5 130 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 ZNF260Q3ZCT1 412 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 CDNFQ49AH0 187 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 TEX38Q6PEX7 206 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 C18orf65Q6ZTR6 163 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 H1FOOQ8IZA3 346 aaPredicted RBP5.41□□□□□ -1.54
HMGN1-205ENST00000419378 ZNF383Q8NA42 475 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 DRAXINQ8NBI3 349 aaPredicted RBP5.41□□□□□ -1.54
HMGN1-205ENST00000419378 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.41□□□□□ -1.54
HMGN1-205ENST00000419378 NPBQ8NG41 125 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 OR8U1Q8NH10 309 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 C5orf30Q96GV9 206 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 GINS4Q9BRT9 223 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 ST6GALNAC5Q9BVH7 336 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 GON7Q9BXV9 100 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 OR2D2Q9H210 308 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 FBXL15Q9H469 300 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 SDHAF2Q9NX18 166 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 KIAA1456Q9P272 454 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 ZNF221Q9UK13 617 aa5.41□□□□□ -1.54
HMGN1-205ENST00000419378 TRAV18A0A075B6X5 111 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 IGHV7-81A0A0B4J1V7 117 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 TSPAN4O14817 238 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 ATP6V0E1O15342 81 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 RBBP9O75884 186 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 APOA2P02652 100 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 IGKV1-16P04430 117 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 SMIM18P0DKX4 95 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 GNG2P59768 71 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 LSM3P62310 102 aaKnown RBP5.4□□□□□ -1.54
HMGN1-205ENST00000419378 PITPNAQ00169 270 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 NDPQ00604 133 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 KPRPQ5T749 579 aaPredicted RBP5.4□□□□□ -1.54
HMGN1-205ENST00000419378 PDPNQ86YL7 162 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 CROCCP3Q8IVE0 287 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 KLHL30-AS1Q8NEE0 82 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 OR13F1Q8NGS4 319 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 DDB2Q92466 427 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 QTRT1Q9BXR0 403 aaKnown RBP5.4□□□□□ -1.54
HMGN1-205ENST00000419378 DCSTAMPQ9H295 470 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 OR51J1Q9H342 316 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 PARP11Q9NR21 331 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 ZFP57Q9NU63 452 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 SPATA2Q9UM82 520 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 GAB2Q9UQC2 676 aa5.4□□□□□ -1.54
HMGN1-205ENST00000419378 TGP01266 2768 aa5.4□□□□□ -1.55
HMGN1-205ENST00000419378 A0A0A6YYH2 397 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 TRAV41A0A0B4J266 112 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 DPPA5A6NC42 116 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 A6NJ64 397 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 G3V318 75 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 RBMXL2O75526 392 aaKnown RBP5.39□□□□□ -1.55
HMGN1-205ENST00000419378 IGHG4P01861 327 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 OR5H8P0DN80 308 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 PSMB8P28062 276 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 SLC6A1P30531 599 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 THBS3P49746 956 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 NCS1P62166 190 aa5.39□□□□□ -1.55
HMGN1-205ENST00000419378 PLGLAQ15195 96 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms