RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 LIN54Q6MZP7 749 aa13.05□□□□□ -0.32
CXCL1-201ENST00000395761 ZNF818PQ6ZRF7 136 aa13.05□□□□□ -0.32
CXCL1-201ENST00000395761 ZNF329Q86UD4 541 aa13.05□□□□□ -0.32
CXCL1-201ENST00000395761 MARCH1Q8TCQ1 289 aa13.05□□□□□ -0.32
CXCL1-201ENST00000395761 TSNAXQ99598 290 aaKnown RBP13.05□□□□□ -0.32
CXCL1-201ENST00000395761 IGHV7-81A0A0B4J1V7 117 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 GPR31O00270 319 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 FCGR3BO75015 233 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 FBXO24O75426 580 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 CRYZL1O95825 349 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 HLA-DRB1P01911 266 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 TCRBP04435 133 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 CTSDP07339 412 aaPredicted RBP13.04□□□□□ -0.32
CXCL1-201ENST00000395761 RRASP10301 218 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 PGAM2P15259 253 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 RND3P61587 244 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 KCTD9Q7L273 389 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 FOXRED2Q8IWF2 684 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 STPG2Q8N412 459 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 TCTEX1D2Q8WW35 142 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 CLCC1Q96S66 551 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 HSD17B10Q99714 261 aaKnown RBP13.04□□□□□ -0.32
CXCL1-201ENST00000395761 RTBDNQ9BSG5 229 aaPredicted RBP13.04□□□□□ -0.32
CXCL1-201ENST00000395761 TPSG1Q9NRR2 321 aa13.04□□□□□ -0.32
CXCL1-201ENST00000395761 METTL1Q9UBP6 276 aaKnown RBP13.04□□□□□ -0.32
CXCL1-201ENST00000395761 PSMB11A5LHX3 300 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 AP4M1O00189 453 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 SHOXO15266 292 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 SLC25A17O43808 307 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 PTTG1O95997 202 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 CRYGBP07316 175 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 LGALS7P47929 136 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 PLGLAQ15195 96 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 ZNF66Q6ZN08 573 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 NRARPQ7Z6K4 114 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 CMTM1Q8IZ96 169 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 SGMS2Q8NHU3 365 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 HARBI1Q96MB7 349 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 CITED2Q99967 270 aaPredicted RBP13.03□□□□□ -0.32
CXCL1-201ENST00000395761 OR51J1Q9H342 316 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 C5orf66Q9H5L9 145 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 VSIG4Q9Y279 399 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 PRELID3BQ9Y3B1 194 aa13.03□□□□□ -0.32
CXCL1-201ENST00000395761 KCNAB3O43448 404 aa13.02□□□□□ -0.33
CXCL1-201ENST00000395761 PGLYRP1O75594 196 aaPredicted RBP13.02□□□□□ -0.33
CXCL1-201ENST00000395761 SPDEFO95238 335 aa13.02□□□□□ -0.33
CXCL1-201ENST00000395761 CX3CL1P78423 397 aa13.02□□□□□ -0.33
CXCL1-201ENST00000395761 NDPQ00604 133 aa13.02□□□□□ -0.33
CXCL1-201ENST00000395761 CD83Q01151 205 aa13.02□□□□□ -0.33
CXCL1-201ENST00000395761 CBX3Q13185 183 aa13.02□□□□□ -0.33
CXCL1-201ENST00000395761 RGS21Q2M5E4 152 aa13.02□□□□□ -0.33
CXCL1-201ENST00000395761 ENKURQ8TC29 256 aa13.02□□□□□ -0.33
CXCL1-201ENST00000395761 CHPT1Q8WUD6 406 aa13.02□□□□□ -0.33
CXCL1-201ENST00000395761 ALX4Q9H161 411 aaPredicted RBP13.02□□□□□ -0.33
CXCL1-201ENST00000395761 C14orf166Q9Y224 244 aaKnown RBP13.02□□□□□ -0.33
CXCL1-201ENST00000395761 NUBP2Q9Y5Y2 271 aa13.02□□□□□ -0.33
CXCL1-201ENST00000395761 TRRAPQ9Y4A5 3859 aa13.01□□□□□ -0.33
CXCL1-201ENST00000395761 IGF1P05019 195 aa13.01□□□□□ -0.33
CXCL1-201ENST00000395761 S100GP29377 79 aa13.01□□□□□ -0.33
CXCL1-201ENST00000395761 MECP2P51608 486 aaKnown RBP13.01□□□□□ -0.33
CXCL1-201ENST00000395761 PJVKQ0ZLH3 352 aa13.01□□□□□ -0.33
CXCL1-201ENST00000395761 PARP11Q9NR21 331 aa13.01□□□□□ -0.33
CXCL1-201ENST00000395761 SLC2A9Q9NRM0 540 aa13.01□□□□□ -0.33
CXCL1-201ENST00000395761 FBXO7Q9Y3I1 522 aa13.01□□□□□ -0.33
CXCL1-201ENST00000395761 WSB1Q9Y6I7 421 aa13.01□□□□□ -0.33
CXCL1-201ENST00000395761 ADARB2-AS1A8MUL3 147 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 G3V318 75 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 ATP6V0E1O15342 81 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 MPPED1O15442 326 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 RAMP3O60896 148 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 CA2P00918 260 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 EGR2P11161 476 aaPredicted RBP13□□□□□ -0.33
CXCL1-201ENST00000395761 PIGPP57054 158 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 DHODHQ02127 395 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 MRGPRG-AS1Q2M3A8 158 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 NSUN5P1Q3KNT7 163 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 PRR31Q5SQ13 230 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 PLET1Q6UQ28 207 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 SLC25A42Q86VD7 318 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 CCDC71LQ8N9Z2 235 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 OR51H1Q8NH63 302 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 OSR1Q8TAX0 266 aaPredicted RBP13□□□□□ -0.33
CXCL1-201ENST00000395761 MARVELD1Q9BSK0 173 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 FLVCR2Q9UPI3 526 aa13□□□□□ -0.33
CXCL1-201ENST00000395761 TCRBV4S1A1TA0A5B7 111 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 M0QZ24 198 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 ARPC1BO15143 372 aaKnown RBP12.99□□□□□ -0.33
CXCL1-201ENST00000395761 TSPAN15O95858 294 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 PI3P19957 117 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 UBE2MP61081 183 aaKnown RBP12.99□□□□□ -0.33
CXCL1-201ENST00000395761 UBE2KP61086 200 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 SSBP2P81877 361 aaPredicted RBP12.99□□□□□ -0.33
CXCL1-201ENST00000395761 CFHR3Q02985 330 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 OXA1LQ15070 435 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 PHLDA2Q53GA4 152 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 PPP1R27Q86WC6 154 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 VKORC1L1Q8N0U8 176 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 SPAG16Q8N0X2 631 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 CENPSQ8N2Z9 138 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 TCTEX1D1Q8N7M0 179 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms