RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 LCN15Q6UWW0 184 aa6.59□□□□□ -1.35
PDLIM5-204ENST00000380176 SSX9Q7RTT3 188 aa6.59□□□□□ -1.35
PDLIM5-204ENST00000380176 ZFP82Q8N141 532 aa6.59□□□□□ -1.35
PDLIM5-204ENST00000380176 CLDND2Q8NHS1 167 aa6.59□□□□□ -1.35
PDLIM5-204ENST00000380176 DTD1Q8TEA8 209 aa6.59□□□□□ -1.35
PDLIM5-204ENST00000380176 SNRNP40Q96DI7 357 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-204ENST00000380176 HSD17B10Q99714 261 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-204ENST00000380176 SMCO4Q9NRQ5 59 aa6.59□□□□□ -1.35
PDLIM5-204ENST00000380176 MLXQ9UH92 298 aa6.59□□□□□ -1.35
PDLIM5-204ENST00000380176 PUS1Q9Y606 427 aaKnown RBP eCLIP6.59□□□□□ -1.35
PDLIM5-204ENST00000380176 RAB29O14966 203 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 RBMXL2O75526 392 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 SCAF4O95104 1147 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 ARG1P05089 322 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 CGB3P0DN86 165 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 CGB7P0DN87 165 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 OR2B8PP59922 312 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 C17orf58Q2M2W7 97 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 SOHLH1Q5JUK2 328 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 C2CD4CQ8TF44 421 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 QTRT1Q9BXR0 403 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 IFI27L2Q9H2X8 130 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 JPT1Q9UK76 154 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 POLEQ07864 2286 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 PTPRQQ9UMZ3 2332 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 TLN1Q9Y490 2541 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 BTBD17A6NE02 478 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 M0R1X1 148 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 F2RL2O00254 374 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 YPEL1O60688 119 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 IGKV1D-33P01593 117 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 IGKV1-33P01594 117 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 GATA4P43694 442 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 ELLP55199 621 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 CYB561D1Q8N8Q1 229 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 FAM222BQ8WU58 562 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 EDARADDQ8WWZ3 215 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 TAF15Q92804 592 aaKnown RBP eCLIP6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 R3HDM4Q96D70 268 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 YPEL2Q96QA6 119 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 HIPK2Q9H2X6 1198 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 OR51M1Q9H341 326 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 SAV1Q9H4B6 383 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 ZNF665Q9H7R5 613 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 ZMAT4Q9H898 229 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 CALYQ9NYX4 217 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 RNF7Q9UBF6 113 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 A0A1W2PPE2 198 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 ZNF729A6NN14 1252 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 PRRG2O14669 202 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 GYPAP02724 150 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 ERVFRD-1P60508 538 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 CCL8P80075 99 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 ZNF506Q5JVG8 444 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 DPPA3Q6W0C5 159 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 TCF23Q7RTU1 214 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 WFDC8Q8IUA0 241 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 SPACA3Q8IXA5 215 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 FAM216BQ8N7L0 139 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 HIST1H2BAQ96A08 127 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 RCC1LQ96I51 464 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 CCL13Q99616 98 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 PSMG3Q9BT73 122 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 GNG13Q9P2W3 67 aa6.58□□□□□ -1.36
PDLIM5-204ENST00000380176 TRAV3A0A0B4J244 114 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 DPRXA6NFQ7 191 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 ZFP92A6NM28 416 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 SMIM6P0DI80 62 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 RAB2AP61019 212 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 CT45A1Q5HYN5 189 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 AVPI1Q5T686 147 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 STUMQ69YW2 141 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 CT45A3Q8NHU0 189 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 GAFA1Q96PS6 74 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 SMDT1Q9H4I9 107 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 SEBOXQ9HB31 216 aaPredicted RBP6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 TRAV1-1A0A0B4J248 108 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 CEBPZOSA8MTT3 80 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 C16orf97H3BN30 126 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 H3BQ15 152 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 MMP23AO75900 390 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 IGHV2-70P01814 119 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 MBP02144 154 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 OR8U8P0C7N1 319 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 G0S2P27469 103 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 RPS23P62266 143 aaKnown RBP6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 TFF3Q07654 80 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 ACSM6Q6P461 480 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 GFRALQ6UXV0 394 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 MRGPRGQ86SM5 289 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 ZNF561Q8N587 486 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 RPP25LQ8N5L8 163 aaKnown RBP6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 TCTEX1D1Q8N7M0 179 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 C15orf54Q8N8G6 183 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 SCNM1Q9BWG6 230 aa6.57□□□□□ -1.36
PDLIM5-204ENST00000380176 LOC102723971A0A1B0GUV8 181 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 HMGB3O15347 200 aaKnown RBP6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 HBE1P02100 147 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 DEFA4P12838 97 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 SELENOVP59797 346 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms