RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 YTHDF2Q9Y5A9 579 aaKnown RBP14.28□□□□□ -0.12
VARS-215ENST00000375663 SHANK1Q9Y566 2161 aa14.28□□□□□ -0.12
VARS-215ENST00000375663 SSTR5P35346 364 aa14.28□□□□□ -0.12
VARS-215ENST00000375663 CSRP2Q16527 193 aa14.28□□□□□ -0.12
VARS-215ENST00000375663 KIAA1644Q3SXP7 199 aa14.28□□□□□ -0.12
VARS-215ENST00000375663 C10orf113Q5VZT2 155 aa14.28□□□□□ -0.12
VARS-215ENST00000375663 TMEM108Q6UXF1 575 aa14.28□□□□□ -0.12
VARS-215ENST00000375663 OR4F17Q8NGA8 305 aa14.28□□□□□ -0.12
VARS-215ENST00000375663 OR2T6Q8NHC8 308 aa14.28□□□□□ -0.12
VARS-215ENST00000375663 KLF14Q8TD94 323 aaPredicted RBP14.28□□□□□ -0.12
VARS-215ENST00000375663 SFRP2Q96HF1 295 aa14.28□□□□□ -0.12
VARS-215ENST00000375663 NPCDR1Q9BY65 106 aa14.28□□□□□ -0.12
VARS-215ENST00000375663 TMEM140Q9NV12 185 aa14.28□□□□□ -0.12
VARS-215ENST00000375663 PPP1R14DQ9NXH3 145 aa14.28□□□□□ -0.12
VARS-215ENST00000375663 FER1L5A0AVI2 2057 aa14.28□□□□□ -0.12
VARS-215ENST00000375663 P01737 135 aa14.27□□□□□ -0.12
VARS-215ENST00000375663 NHLH1Q02575 133 aa14.27□□□□□ -0.12
VARS-215ENST00000375663 PQLC2Q6ZP29 291 aa14.27□□□□□ -0.12
VARS-215ENST00000375663 TIMD4Q96H15 378 aa14.27□□□□□ -0.12
VARS-215ENST00000375663 SEBOXQ9HB31 216 aaPredicted RBP14.27□□□□□ -0.12
VARS-215ENST00000375663 C9JQL5 133 aa14.27□□□□□ -0.12
VARS-215ENST00000375663 HIST1H1EP10412 219 aaKnown RBP14.27□□□□□ -0.12
VARS-215ENST00000375663 LYZP61626 148 aa14.27□□□□□ -0.12
VARS-215ENST00000375663 FLYWCH2Q96CP2 140 aaKnown RBP14.27□□□□□ -0.12
VARS-215ENST00000375663 AAMDCQ9H7C9 122 aa14.27□□□□□ -0.12
VARS-215ENST00000375663 PILRBQ9UKJ0 227 aa14.27□□□□□ -0.12
VARS-215ENST00000375663 TCF19Q9Y242 345 aa14.27□□□□□ -0.12
VARS-215ENST00000375663 RFNGQ9Y644 331 aa14.27□□□□□ -0.12
VARS-215ENST00000375663 C12orf77C9JDV5 145 aa14.27□□□□□ -0.13
VARS-215ENST00000375663 CRYGSP22914 178 aa14.27□□□□□ -0.13
VARS-215ENST00000375663 COL8A1P27658 744 aa14.27□□□□□ -0.13
VARS-215ENST00000375663 IBA57Q5T440 356 aaKnown RBP14.27□□□□□ -0.13
VARS-215ENST00000375663 TMEM45BQ96B21 275 aa14.27□□□□□ -0.13
VARS-215ENST00000375663 WBP1Q96G27 269 aa14.27□□□□□ -0.13
VARS-215ENST00000375663 GNB4Q9HAV0 340 aa14.27□□□□□ -0.13
VARS-215ENST00000375663 PNRC2Q9NPJ4 139 aaKnown RBP14.27□□□□□ -0.13
VARS-215ENST00000375663 PLXNA2O75051 1894 aa14.27□□□□□ -0.13
VARS-215ENST00000375663 CELA3AP09093 270 aa14.27□□□□□ -0.13
VARS-215ENST00000375663 CXCL1P09341 107 aa14.27□□□□□ -0.13
VARS-215ENST00000375663 LYL1P12980 280 aa14.27□□□□□ -0.13
VARS-215ENST00000375663 CBLN1P23435 193 aa14.27□□□□□ -0.13
VARS-215ENST00000375663 LCN2P80188 198 aa14.27□□□□□ -0.13
VARS-215ENST00000375663 TGIF2LYQ8IUE0 185 aa14.27□□□□□ -0.13
VARS-215ENST00000375663 VKORC1L1Q8N0U8 176 aa14.27□□□□□ -0.13
VARS-215ENST00000375663 NDUFA2O43678 99 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 CRYABP02511 175 aaKnown RBP14.26□□□□□ -0.13
VARS-215ENST00000375663 TNXAQ16473 311 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 RPEQ96AT9 228 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 GSX1Q9H4S2 264 aaPredicted RBP14.26□□□□□ -0.13
VARS-215ENST00000375663 CENPFP49454 3210 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 KLK10O43240 276 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 SMPD2O60906 423 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 OR5AL1P0C617 328 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 RNF224P0DH78 156 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 RPL23P62829 140 aaKnown RBP14.26□□□□□ -0.13
VARS-215ENST00000375663 TFF3Q07654 80 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 ZNF524Q96C55 264 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 IGKV1-27A0A075B6S5 117 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 MKRN2OSH3BPM6 223 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 HSPE1P61604 102 aaKnown RBP14.26□□□□□ -0.13
VARS-215ENST00000375663 ZIC4Q8N9L1 334 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 NABP1Q96AH0 204 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 FAM122AQ96E09 287 aa14.26□□□□□ -0.13
VARS-215ENST00000375663 WNT9BO14905 357 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 TCF21O43680 179 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 CRYBB3P26998 211 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 PTGDSP41222 190 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 FXYD3Q14802 87 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 OR4B1Q8NGF8 309 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 SPSB4Q96A44 273 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 ISLRO14498 428 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 CD99P14209 185 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 REG1BP48304 166 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 C21orf62-AS1Q17RA5 79 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 GFI1BQ5VTD9 330 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 MMD2Q8IY49 270 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 PAXXQ9BUH6 204 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 CEACAM18A8MTB9 384 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 C17orf98A8MV24 154 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 HLA-DQA1P01909 254 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 UMODP07911 640 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 RPL31P62899 125 aaKnown RBP14.25□□□□□ -0.13
VARS-215ENST00000375663 NRN1LQ496H8 165 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 C17orf82Q86X59 251 aaPredicted RBP14.25□□□□□ -0.13
VARS-215ENST00000375663 DEFB124Q8NES8 71 aa14.25□□□□□ -0.13
VARS-215ENST00000375663 ATXN7O15265 892 aaPredicted RBP14.24□□□□□ -0.13
VARS-215ENST00000375663 NEURL1O76050 574 aa14.24□□□□□ -0.13
VARS-215ENST00000375663 STXBP6Q8NFX7 210 aa14.24□□□□□ -0.13
VARS-215ENST00000375663 FGFBP3Q8TAT2 258 aa14.24□□□□□ -0.13
VARS-215ENST00000375663 ZNF407Q9C0G0 2248 aa14.24□□□□□ -0.13
VARS-215ENST00000375663 COL4A6Q14031 1691 aa14.24□□□□□ -0.13
VARS-215ENST00000375663 LRRK1Q38SD2 2015 aa14.24□□□□□ -0.13
VARS-215ENST00000375663 WISP1O95388 367 aa14.24□□□□□ -0.13
VARS-215ENST00000375663 CDX2Q99626 313 aaPredicted RBP14.24□□□□□ -0.13
VARS-215ENST00000375663 CLEC3BP05452 202 aa14.24□□□□□ -0.13
VARS-215ENST00000375663 LINC00869P0C866 280 aa14.24□□□□□ -0.13
VARS-215ENST00000375663 COX7A1P24310 79 aa14.24□□□□□ -0.13
VARS-215ENST00000375663 ERVFRD-1P60508 538 aa14.24□□□□□ -0.13
VARS-215ENST00000375663 ZNF137PP52743 207 aa14.23□□□□□ -0.13
VARS-215ENST00000375663 SLC35E4Q6ICL7 350 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms