RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 OR8B3Q8NGG8 313 aa13.12□□□□□ -0.31
C9orf78-201ENST00000372447 CD300LFQ8TDQ1 290 aa13.12□□□□□ -0.31
C9orf78-201ENST00000372447 OR8B2Q96RD0 313 aa13.12□□□□□ -0.31
C9orf78-201ENST00000372447 PSENENQ9NZ42 101 aa13.12□□□□□ -0.31
C9orf78-201ENST00000372447 CR1P17927 2039 aa13.11□□□□□ -0.31
C9orf78-201ENST00000372447 NKX6-3A6NJ46 265 aa13.11□□□□□ -0.31
C9orf78-201ENST00000372447 H3BP45 60 aa13.11□□□□□ -0.31
C9orf78-201ENST00000372447 DVL1O14640 695 aa13.11□□□□□ -0.31
C9orf78-201ENST00000372447 ITGB1BP1O14713 200 aa13.11□□□□□ -0.31
C9orf78-201ENST00000372447 PROP1O75360 226 aa13.11□□□□□ -0.31
C9orf78-201ENST00000372447 IAPPP10997 89 aa13.11□□□□□ -0.31
C9orf78-201ENST00000372447 RAB5CP51148 216 aa13.11□□□□□ -0.31
C9orf78-201ENST00000372447 LINC00205P59089 165 aa13.11□□□□□ -0.31
C9orf78-201ENST00000372447 TAS2R30P59541 319 aa13.11□□□□□ -0.31
C9orf78-201ENST00000372447 TMEM249Q2WGJ8 235 aa13.11□□□□□ -0.31
C9orf78-201ENST00000372447 IFI27L2Q9H2X8 130 aa13.11□□□□□ -0.31
C9orf78-201ENST00000372447 GFOD1Q9NXC2 390 aa13.11□□□□□ -0.31
C9orf78-201ENST00000372447 RAB29O14966 203 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 ZFP36P26651 326 aaKnown RBP13.1□□□□□ -0.31
C9orf78-201ENST00000372447 RAB7AP51149 207 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 UBE2KP61086 200 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 MIDNQ504T8 468 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 WDR25Q64LD2 544 aaPredicted RBP13.1□□□□□ -0.31
C9orf78-201ENST00000372447 NCR3LG1Q68D85 454 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 TCF23Q7RTU1 214 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 LYPD6BQ8NI32 183 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 C1orf159Q96HA4 380 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 ATP5SQ99766 215 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 TMUB1Q9BVT8 246 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 CACFD1Q9UGQ2 172 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 CSPG4Q6UVK1 2322 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 SVEP1Q4LDE5 3571 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 ABCA2Q9BZC7 2435 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 HIVEP1P15822 2718 aa13.1□□□□□ -0.31
C9orf78-201ENST00000372447 TMEM218A2RU14 115 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 ZNF729A6NN14 1252 aaPredicted RBP13.09□□□□□ -0.31
C9orf78-201ENST00000372447 IGHV3-7P01780 117 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 APOC3P02656 99 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 ATP6V0CP27449 155 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 SRSF3P84103 164 aaKnown RBP13.09□□□□□ -0.31
C9orf78-201ENST00000372447 AKR1C1Q04828 323 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 TNFRSF9Q07011 255 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 TMEM267Q0VDI3 215 aaPredicted RBP13.09□□□□□ -0.31
C9orf78-201ENST00000372447 CORO2AQ92828 525 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 ABHD14AQ9BUJ0 271 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 SSBP3Q9BWW4 388 aaPredicted RBP13.09□□□□□ -0.31
C9orf78-201ENST00000372447 LINC00574Q9H8X3 128 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.09□□□□□ -0.31
C9orf78-201ENST00000372447 HSPB7Q9UBY9 170 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 GAB2Q9UQC2 676 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 STRAPQ9Y3F4 350 aaKnown RBP13.09□□□□□ -0.31
C9orf78-201ENST00000372447 YLPM1P49750 1951 aaKnown RBP13.09□□□□□ -0.31
C9orf78-201ENST00000372447 M0R1X1 148 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 SLC31A2O15432 143 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 NDUFB3O43676 98 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 DFFBO76075 338 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 IGHV4-31P0DP07 118 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 CD99P14209 185 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 CAMLGP49069 296 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 GNB2P62879 340 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 RPL39P5Q59GN2 51 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 H2BFWTQ7Z2G1 175 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 TSNAXQ99598 290 aaKnown RBP13.09□□□□□ -0.31
C9orf78-201ENST00000372447 RBKSQ9H477 322 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 LPAR2Q9HBW0 351 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 IDI2-AS1Q9NZ38 188 aa13.09□□□□□ -0.31
C9orf78-201ENST00000372447 SLC25A10Q9UBX3 287 aaPredicted RBP13.09□□□□□ -0.31
C9orf78-201ENST00000372447 MARCH11A6NNE9 402 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 FCGR3BO75015 233 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 PRH1P02810 166 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 NDUFB7P17568 137 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 M6PRP20645 277 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 LCN2P80188 198 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 LRRC10Q5BKY1 277 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 CT45A1Q5HYN5 189 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 UTF1Q5T230 341 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 TMEM182Q6ZP80 229 aaPredicted RBP13.08□□□□□ -0.32
C9orf78-201ENST00000372447 OR2G3Q8NGZ4 309 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 CT45A3Q8NHU0 189 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 LEAP2Q969E1 77 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 TREM1Q9NP99 234 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 ABCA1O95477 2261 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 ARHGAP32A7KAX9 2087 aa13.08□□□□□ -0.32
C9orf78-201ENST00000372447 hADV38S2A0JD32 116 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 B4DSR2 109 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 TRIM77I1YAP6 450 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 HPRT1P00492 218 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 FHITP49789 147 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 ZNF616Q08AN1 781 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 TMEM30BQ3MIR4 351 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 R3HDM4Q96D70 268 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 GNPNAT1Q96EK6 184 aaPredicted RBP13.07□□□□□ -0.32
C9orf78-201ENST00000372447 MS4A7Q9GZW8 240 aaPredicted RBP13.07□□□□□ -0.32
C9orf78-201ENST00000372447 C19orf12Q9NSK7 152 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 DOCK11Q5JSL3 2073 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 AGPAT2O15120 278 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 RBFOX2O43251 390 aaKnown RBP eCLIP13.07□□□□□ -0.32
C9orf78-201ENST00000372447 TSPAN15O95858 294 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 METTL15P1P0C7V9 234 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 NFYBP25208 207 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms