RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 RBMS2Q15434 407 aaKnown RBP11.02□□□□□ -0.65
TPM3-211ENST00000368531 VMA21Q3ZAQ7 101 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 ZNF585BQ52M93 769 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 MZT2BQ6NZ67 158 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 LINC01006Q8NI28 216 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 CD300LFQ8TDQ1 290 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 TP53RKQ96S44 253 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 MDFIQ99750 246 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 HSPB9Q9BQS6 159 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 FLVCR2Q9UPI3 526 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 JMJD1CQ15652 2540 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 TMEM89A2RUT3 159 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 RBFOX2O43251 390 aaKnown RBP eCLIP11.01□□□□□ -0.65
TPM3-211ENST00000368531 NDUFB6O95139 128 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 HPRT1P00492 218 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 HRASP01112 189 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 OR5AC1P0C628 307 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 SAA1P0DJI8 122 aaPredicted RBP11.01□□□□□ -0.65
TPM3-211ENST00000368531 VDAC2P45880 294 aaPredicted RBP11.01□□□□□ -0.65
TPM3-211ENST00000368531 GNB1P62873 340 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 PJVKQ0ZLH3 352 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 FOXL1Q12952 345 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 SLC35E3Q7Z769 313 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 SGPP2Q8IWX5 399 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 DMBX1Q8NFW5 382 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 ABHD5Q8WTS1 349 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 TMEM230Q96A57 120 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 R3HDM4Q96D70 268 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 RHOVQ96L33 236 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 NAA60Q9H7X0 242 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 BEX1Q9HBH7 125 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 LINC00527Q9UJ94 153 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 RNF114Q9Y508 228 aa11.01□□□□□ -0.65
TPM3-211ENST00000368531 SETD2Q9BYW2 2564 aaPredicted RBP11□□□□□ -0.65
TPM3-211ENST00000368531 FAM240BA0A1B0GVZ2 78 aa11□□□□□ -0.65
TPM3-211ENST00000368531 CLPSL1A2RUU4 121 aa11□□□□□ -0.65
TPM3-211ENST00000368531 CRYM-AS1A6NIL9 109 aa11□□□□□ -0.65
TPM3-211ENST00000368531 H0Y980 276 aa11□□□□□ -0.65
TPM3-211ENST00000368531 ARPC1BO15143 372 aaKnown RBP11□□□□□ -0.65
TPM3-211ENST00000368531 SPDEFO95238 335 aa11□□□□□ -0.65
TPM3-211ENST00000368531 CA2P00918 260 aa11□□□□□ -0.65
TPM3-211ENST00000368531 KRASP01116 189 aa11□□□□□ -0.65
TPM3-211ENST00000368531 SERPINE2P07093 398 aa11□□□□□ -0.65
TPM3-211ENST00000368531 CRYGBP07316 175 aa11□□□□□ -0.65
TPM3-211ENST00000368531 G6PCP35575 357 aa11□□□□□ -0.65
TPM3-211ENST00000368531 UBE2KP61086 200 aa11□□□□□ -0.65
TPM3-211ENST00000368531 ERVK-16P61578 105 aa11□□□□□ -0.65
TPM3-211ENST00000368531 ASAH1Q13510 395 aa11□□□□□ -0.65
TPM3-211ENST00000368531 TRIM16LQ309B1 348 aa11□□□□□ -0.65
TPM3-211ENST00000368531 AWAT1Q58HT5 328 aa11□□□□□ -0.65
TPM3-211ENST00000368531 PPP1R27Q86WC6 154 aa11□□□□□ -0.65
TPM3-211ENST00000368531 CENPSQ8N2Z9 138 aa11□□□□□ -0.65
TPM3-211ENST00000368531 TCTEX1D1Q8N7M0 179 aa11□□□□□ -0.65
TPM3-211ENST00000368531 TEX45Q8NA69 505 aa11□□□□□ -0.65
TPM3-211ENST00000368531 C16orf95Q9H693 158 aa11□□□□□ -0.65
TPM3-211ENST00000368531 PLEKHA2Q9HB19 425 aa11□□□□□ -0.65
TPM3-211ENST00000368531 PRR13Q9NZ81 148 aa11□□□□□ -0.65
TPM3-211ENST00000368531 PLXNB1O43157 2135 aa11□□□□□ -0.65
TPM3-211ENST00000368531 TRAV6A0A075B6T7 132 aa10.99□□□□□ -0.65
TPM3-211ENST00000368531 OR2A4O95047 310 aa10.99□□□□□ -0.65
TPM3-211ENST00000368531 NQO2P16083 231 aa10.99□□□□□ -0.65
TPM3-211ENST00000368531 VAMP1P23763 118 aa10.99□□□□□ -0.65
TPM3-211ENST00000368531 TAS2R31P59538 309 aa10.99□□□□□ -0.65
TPM3-211ENST00000368531 OR4A47Q6IF82 309 aa10.99□□□□□ -0.65
TPM3-211ENST00000368531 Q8N2B8 174 aa10.99□□□□□ -0.65
TPM3-211ENST00000368531 NOL4LQ96MY1 436 aaPredicted RBP10.99□□□□□ -0.65
TPM3-211ENST00000368531 OR2A7Q96R45 310 aa10.99□□□□□ -0.65
TPM3-211ENST00000368531 PARP11Q9NR21 331 aa10.99□□□□□ -0.65
TPM3-211ENST00000368531 SERTAD4Q9NUC0 356 aa10.99□□□□□ -0.65
TPM3-211ENST00000368531 COMMD9Q9P000 198 aa10.99□□□□□ -0.65
TPM3-211ENST00000368531 KCNIP3Q9Y2W7 256 aa10.99□□□□□ -0.65
TPM3-211ENST00000368531 C2CD3Q4AC94 2353 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 IGHV7-81A0A0B4J1V7 117 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 CNIH1O95406 144 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 IGKV1-39P01597 117 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 IGHG2P01859 326 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 HLA-DRB1P01911 266 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 IGKV1D-39P04432 117 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 TCRBP04435 133 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 ANXA7P20073 488 aaKnown RBP10.98□□□□□ -0.65
TPM3-211ENST00000368531 SLC6A1P30531 599 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 DEFA1P59665 94 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 DEFA3P59666 94 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 CX3CL1P78423 397 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 FXYD3Q14802 87 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 TNXAQ16473 311 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 ENKURQ8TC29 256 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 GLYATL2Q8WU03 294 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 AIFM2Q9BRQ8 373 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 FAM103A1Q9BTL3 118 aaKnown RBP10.98□□□□□ -0.65
TPM3-211ENST00000368531 C20orf85Q9H1P6 137 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 OR51J1Q9H342 316 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 ZNF430Q9H8G1 570 aaPredicted RBP10.98□□□□□ -0.65
TPM3-211ENST00000368531 TMEM140Q9NV12 185 aa10.98□□□□□ -0.65
TPM3-211ENST00000368531 TRAV3A0A0B4J244 114 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 MARCH11A6NNE9 402 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 ATP6V0E1O15342 81 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 KCNAB3O43448 404 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 KBTBD11O94819 623 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 UCP1P25874 307 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms