RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 TNFSF12O43508 249 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 SLC22A5O76082 557 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 HNRNPCP07910 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 HERV-K104P61576 105 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 PSG5Q15238 335 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 ZNF818PQ6ZRF7 136 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 KCTD9Q7L273 389 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 AKAP14Q86UN6 197 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 OR52B4Q8NGK2 314 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 MOB3AQ96BX8 217 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 FLYWCH2Q96CP2 140 aaKnown RBP11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 ADTRPQ96IZ2 230 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 TPSG1Q9NRR2 321 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 KIAA1456Q9P272 454 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 FBXO24O75426 580 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 IGLV2-23P01705 113 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 HLA-DRB1P01911 266 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 VAX1Q5SQQ9 334 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 CENPVQ7Z7K6 275 aaPredicted RBP11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 ZNF329Q86UD4 541 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 OR5AU1Q8NGC0 362 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 MARCH1Q8TCQ1 289 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 MRGPRFQ96AM1 343 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 VSIG4Q9Y279 399 aa11.89□□□□□ -0.51
SMPDL3A-201ENST00000368440 SRRM4A7MD48 611 aaKnown RBP11.88□□□□□ -0.51
SMPDL3A-201ENST00000368440 FCN1O00602 326 aa11.88□□□□□ -0.51
SMPDL3A-201ENST00000368440 CRYZL1O95825 349 aa11.88□□□□□ -0.51
SMPDL3A-201ENST00000368440 BRWD1-AS2P59051 145 aa11.88□□□□□ -0.51
SMPDL3A-201ENST00000368440 RTL8BQ17RB0 113 aa11.88□□□□□ -0.51
SMPDL3A-201ENST00000368440 TMEM177Q53S58 311 aa11.88□□□□□ -0.51
SMPDL3A-201ENST00000368440 TCTEX1D4Q5JR98 221 aa11.88□□□□□ -0.51
SMPDL3A-201ENST00000368440 STPG2Q8N412 459 aa11.88□□□□□ -0.51
SMPDL3A-201ENST00000368440 OR6F1Q8NGZ6 308 aa11.88□□□□□ -0.51
SMPDL3A-201ENST00000368440 TCTEX1D2Q8WW35 142 aa11.88□□□□□ -0.51
SMPDL3A-201ENST00000368440 HARBI1Q96MB7 349 aa11.88□□□□□ -0.51
SMPDL3A-201ENST00000368440 RNF5Q99942 180 aa11.88□□□□□ -0.51
SMPDL3A-201ENST00000368440 METTL1Q9UBP6 276 aaKnown RBP11.88□□□□□ -0.51
SMPDL3A-201ENST00000368440 IGHV7-81A0A0B4J1V7 117 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 SSNA1O43805 119 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 SLC25A17O43808 307 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 FCGR3BO75015 233 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 CCNKO75909 580 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 PI3P19957 117 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 GNRHRP30968 328 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 NDPQ00604 133 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 TAGLNQ01995 201 aaKnown RBP11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 PLGLAQ15195 96 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 C4orf46Q504U0 113 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 LIN54Q6MZP7 749 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 FOXRED2Q8IWF2 684 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 CLCC1Q96S66 551 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 TSNAXQ99598 290 aaKnown RBP11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 SLC25A21Q9BQT8 299 aaPredicted RBP11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 OR51J1Q9H342 316 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 SLC2A8Q9NY64 477 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 HMX3A6NHT5 357 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 AP4M1O00189 453 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 KCNAB3O43448 404 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 SPDEFO95238 335 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 RRASP10301 218 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 CD83Q01151 205 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 MSMO1Q15800 293 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 ZNF66Q6ZN08 573 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 ARRDC1Q8N5I2 433 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 TERB2Q8NHR7 220 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 HSD17B10Q99714 261 aaKnown RBP11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 CITED2Q99967 270 aaPredicted RBP11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 MED28Q9H204 178 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 FBXO7Q9Y3I1 522 aa11.87□□□□□ -0.51
SMPDL3A-201ENST00000368440 PSMB11A5LHX3 300 aa11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 SHOXO15266 292 aa11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 ATP6V0E1O15342 81 aa11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 CRYGBP07316 175 aa11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 PGAM2P15259 253 aa11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 UBE2MP61081 183 aaKnown RBP11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 AADACL3Q5VUY0 350 aa11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 UXS1Q8NBZ7 420 aa11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 ADAD2Q8NCV1 583 aaKnown RBP11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 CHAC2Q8WUX2 184 aa11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 PARP11Q9NR21 331 aa11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 PRELID3BQ9Y3B1 194 aa11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 VWFP04275 2813 aa11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 PLXNB1O43157 2135 aa11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 TRRAPQ9Y4A5 3859 aa11.86□□□□□ -0.51
SMPDL3A-201ENST00000368440 PKD1L1Q8TDX9 2849 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 C7orf66A4D0T2 115 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 ADARB2-AS1A8MUL3 147 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 CA2P00918 260 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 AKR1C4P17516 323 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 RRAS2P62070 204 aaPredicted RBP11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 FCN2Q15485 313 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 ZBTB34Q8NCN2 500 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 PRAF2O60831 178 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 RAMP3O60896 148 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 TSPAN15O95858 294 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 IGF1P05019 195 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 LGALS7P47929 136 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 CX3CL1P78423 397 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 SSBP2P81877 361 aaPredicted RBP11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 PJVKQ0ZLH3 352 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms