RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 MMP24Q9Y5R2 645 aa7.67□□□□□ -1.18
VTA1-201ENST00000367621 MED13LQ71F56 2210 aa7.67□□□□□ -1.18
VTA1-201ENST00000367621 ARID1AO14497 2285 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 K7EPK0 472 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 KCNAB3O43448 404 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 LOXL1Q08397 574 aaPredicted RBP7.66□□□□□ -1.18
VTA1-201ENST00000367621 FGL1Q08830 312 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 POU2AF1Q16633 256 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 LRRC37A5PQ49AS3 106 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 AARDQ4LEZ3 155 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 Q5PR19 223 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 TPTE2P1Q5T6R2 138 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 PRSS54Q6PEW0 395 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 PRSS57Q6UWY2 283 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 LHFPL4Q7Z7J7 247 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 FAM71E2Q8N5Q1 922 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 DMBX1Q8NFW5 382 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 OR1S1Q8NH92 325 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 C17orf50Q8WW18 174 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 R3HDM4Q96D70 268 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 RRNAD1Q96FB5 475 aaKnown RBP7.66□□□□□ -1.18
VTA1-201ENST00000367621 RITA1Q96K30 269 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 PCGF1Q9BSM1 259 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 COMMD9Q9P000 198 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 MBD2Q9UBB5 411 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 TNFSF18Q9UNG2 199 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 RCL1Q9Y2P8 373 aaKnown RBP7.66□□□□□ -1.18
VTA1-201ENST00000367621 CSMD1Q96PZ7 3565 aa7.66□□□□□ -1.18
VTA1-201ENST00000367621 PDZD2O15018 2839 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 FXYD6-FXYD2A0A087WZ82 144 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 TRAV3A0A0B4J244 114 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 IGHV1-3A0A0C4DH29 117 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 A0A1W2PPI3 338 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 RNF222A6NCQ9 220 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 MARCH11A6NNE9 402 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 TOX4O94842 621 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 TMEM50AO95807 157 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 CRYZL1O95825 349 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 IGLV2-23P01705 113 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 ARG1P05089 322 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 OR9G9P0C7N8 305 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 IL3RAP26951 378 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 SMCO1Q147U7 214 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 TMEM177Q53S58 311 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 TGIF2LXQ8IUE1 241 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 PDZD9Q8IXQ8 264 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 VKORC1L1Q8N0U8 176 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 DYNAPQ8N1N2 210 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 OR4S2Q8NH73 311 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 SPIN2AQ99865 258 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 SPIN2BQ9BPZ2 258 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 SLC35D1Q9NTN3 355 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 COA4Q9NYJ1 87 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 DPM3Q9P2X0 92 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 CACNG5Q9UF02 275 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 POMT1Q9Y6A1 747 aa7.65□□□□□ -1.18
VTA1-201ENST00000367621 HECTD1Q9ULT8 2610 aa7.65□□□□□ -1.19
VTA1-201ENST00000367621 PIGBOS1A0A0B4J2F0 54 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 CENPVL3A0A0U1RRI6 287 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 A0A1W2PRD5 423 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 A0A1W2PRF3 423 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 A0A1W2PRM7 423 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 MSGN1A6NI15 193 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 FAM90A9PA6NNJ1 464 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 LEUTXA8MZ59 168 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 B4DSR2 109 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 DEDDO75618 318 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 GAPDHP04406 335 aaKnown RBP7.64□□□□□ -1.19
VTA1-201ENST00000367621 MSMBP08118 114 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 RRASP10301 218 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 NQO2P16083 231 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 PAX6P26367 422 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 HTR1DP28221 377 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 UBE2E1P51965 193 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 AKR1C2P52895 323 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 PAX9P55771 341 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 S100A10P60903 97 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 POLR2GP62487 172 aaKnown RBP eCLIP7.64□□□□□ -1.19
VTA1-201ENST00000367621 IFITM2Q01629 132 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 HABP2Q14520 560 aaPredicted RBP7.64□□□□□ -1.19
VTA1-201ENST00000367621 C21orf62-AS1Q17RA5 79 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 MRGPRG-AS1Q2M3A8 158 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 FBLN7Q53RD9 439 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 DHRS7BQ6IAN0 325 aaPredicted RBP7.64□□□□□ -1.19
VTA1-201ENST00000367621 ZNF546Q86UE3 836 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 MAPK1IP1LQ8NDC0 245 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 CFHR4Q92496 578 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 LHX4Q969G2 390 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 REG4Q9BYZ8 158 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 MAGT1Q9H0U3 335 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 AMMECR1Q9Y4X0 333 aaPredicted RBP7.64□□□□□ -1.19
VTA1-201ENST00000367621 HSPB11Q9Y547 144 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 ABCA2Q9BZC7 2435 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 ARHGAP32A7KAX9 2087 aa7.64□□□□□ -1.19
VTA1-201ENST00000367621 IGHV3-72A0A0B4J1Y9 119 aa7.63□□□□□ -1.19
VTA1-201ENST00000367621 ARPC5O15511 151 aa7.63□□□□□ -1.19
VTA1-201ENST00000367621 ST8SIA3O43173 380 aa7.63□□□□□ -1.19
VTA1-201ENST00000367621 ATG12O94817 140 aa7.63□□□□□ -1.19
VTA1-201ENST00000367621 SCGB1D2O95969 90 aa7.63□□□□□ -1.19
VTA1-201ENST00000367621 IGHV4-31P0DP07 118 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms