RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 PUSL1Q8N0Z8 303 aaKnown RBP2.78□□□□□ -1.96
CCDC66-202ENST00000341455 ZFAND1Q8TCF1 268 aa2.78□□□□□ -1.96
CCDC66-202ENST00000341455 NABP2Q9BQ15 211 aa2.78□□□□□ -1.96
CCDC66-202ENST00000341455 CMSS1Q9BQ75 279 aaKnown RBP2.78□□□□□ -1.96
CCDC66-202ENST00000341455 ATG5Q9H1Y0 275 aa2.78□□□□□ -1.96
CCDC66-202ENST00000341455 ELL3Q9HB65 397 aaPredicted RBP2.78□□□□□ -1.96
CCDC66-202ENST00000341455 TAF9BQ9HBM6 251 aa2.78□□□□□ -1.96
CCDC66-202ENST00000341455 PLEKHJ1Q9NW61 149 aa2.78□□□□□ -1.96
CCDC66-202ENST00000341455 KCNIP1Q9NZI2 227 aa2.78□□□□□ -1.96
CCDC66-202ENST00000341455 COMMD9Q9P000 198 aa2.78□□□□□ -1.96
CCDC66-202ENST00000341455 DPM3Q9P2X0 92 aa2.78□□□□□ -1.96
CCDC66-202ENST00000341455 SHPKQ9UHJ6 478 aa2.78□□□□□ -1.96
CCDC66-202ENST00000341455 VPREB3Q9UKI3 123 aa2.78□□□□□ -1.96
CCDC66-202ENST00000341455 TCF19Q9Y242 345 aa2.78□□□□□ -1.96
CCDC66-202ENST00000341455 OR2W1Q9Y3N9 320 aa2.78□□□□□ -1.96
CCDC66-202ENST00000341455 DIDO1Q9BTC0 2240 aaKnown RBP2.78□□□□□ -1.96
CCDC66-202ENST00000341455 ALPK2Q86TB3 2170 aa2.78□□□□□ -1.96
CCDC66-202ENST00000341455 TRGV11A0A075B6L2 103 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 IGKV1D-8A0A087WSZ0 117 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 PNMA8CA0A1B0GUJ8 204 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 A0A1W2PPK0 400 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 ZNF736B4DX44 427 aaPredicted RBP2.77□□□□□ -1.97
CCDC66-202ENST00000341455 H3BUA1 57 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 M0QZ24 198 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 SDCBPO00560 298 aaPredicted RBP2.77□□□□□ -1.97
CCDC66-202ENST00000341455 RAB29O14966 203 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 IGLV2-23P01705 113 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 IGF1P05019 195 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 CSN3P07498 182 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 CD3GP09693 182 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 IGHV4-38-2P0DP08 117 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 GABRR1P24046 479 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 PRSS3P35030 304 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 BTCP35070 178 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 THBS3P49746 956 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 TAS2R19P59542 299 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 ARPC4P59998 168 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 UBA52P62987 128 aaKnown RBP2.77□□□□□ -1.97
CCDC66-202ENST00000341455 ASAH1Q13510 395 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 ATXN7L3Q14CW9 347 aaPredicted RBP2.77□□□□□ -1.97
CCDC66-202ENST00000341455 TMEM69Q5SWH9 247 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 TGIF2LXQ8IUE1 241 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 ABHD12Q8N2K0 398 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 FAM71E2Q8N5Q1 922 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 SAMD12Q8N8I0 201 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 OR4A16Q8NH70 328 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 SSMEM1Q8WWF3 244 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 DAZAP1Q96EP5 407 aaKnown RBP2.77□□□□□ -1.97
CCDC66-202ENST00000341455 GALNT14Q96FL9 552 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 HSD17B10Q99714 261 aaKnown RBP2.77□□□□□ -1.97
CCDC66-202ENST00000341455 CACFD1Q9UGQ2 172 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 HERC2O95714 4834 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 CSMD2Q7Z408 3487 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 IGHV1-3A0A0C4DH29 117 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 HELTA6NFD8 242 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 H0YJW9 148 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 HLA-DRB1P01911 266 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 CTSDP07339 412 aaPredicted RBP2.77□□□□□ -1.97
CCDC66-202ENST00000341455 FBP1P09467 338 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 OCMP0CE72 109 aaPredicted RBP2.77□□□□□ -1.97
CCDC66-202ENST00000341455 GSTT2BP0CG30 244 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 GNB3P16520 340 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 CCL3L1P16619 93 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 HTR1DP28221 377 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 SLC6A1P30531 599 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 SAA4P35542 130 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 GABRA2P47869 451 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 CDX1P47902 265 aaPredicted RBP2.77□□□□□ -1.97
CCDC66-202ENST00000341455 RFX2P48378 723 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 CLDN12P56749 244 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 SRSF4Q08170 494 aaKnown RBP2.77□□□□□ -1.97
CCDC66-202ENST00000341455 SLC9A3R2Q15599 337 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 CARTPTQ16568 116 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 PRAMEF5Q5TYX0 476 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 OR10K2Q6IF99 312 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 ZNF782Q6ZMW2 699 aaPredicted RBP2.77□□□□□ -1.97
CCDC66-202ENST00000341455 FOXRED2Q8IWF2 684 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 SLC38A6Q8IZM9 456 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 ZNF114Q8NC26 417 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 OR1L1Q8NH94 360 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 MCFD2Q8NI22 146 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 RNF183Q96D59 192 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 ABHD14BQ96IU4 210 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 WWC2-AS2Q96NR7 200 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 DPAGT1Q9H3H5 408 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 PSG11Q9UQ72 335 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.77□□□□□ -1.973e-16■■■■■ 60.7
CCDC66-202ENST00000341455 RYR3Q15413 4870 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 CRYBG3Q68DQ2 2970 aa2.77□□□□□ -1.97
CCDC66-202ENST00000341455 MEIKINA0A087WXM9 373 aa2.76□□□□□ -1.97
CCDC66-202ENST00000341455 A0A087X0K7 114 aa2.76□□□□□ -1.97
CCDC66-202ENST00000341455 A0A1W2PN81 502 aa2.76□□□□□ -1.97
CCDC66-202ENST00000341455 ARPC1BO15143 372 aaKnown RBP2.76□□□□□ -1.97
CCDC66-202ENST00000341455 TFF1P04155 84 aa2.76□□□□□ -1.97
CCDC66-202ENST00000341455 GAPDHP04406 335 aaKnown RBP2.76□□□□□ -1.97
CCDC66-202ENST00000341455 CT45A6P0DMU7 189 aa2.76□□□□□ -1.97
CCDC66-202ENST00000341455 CT45A5P0DMU8 189 aa2.76□□□□□ -1.97
CCDC66-202ENST00000341455 CT45A7P0DMV0 189 aa2.76□□□□□ -1.97
CCDC66-202ENST00000341455 NDUFB7P17568 137 aa2.76□□□□□ -1.97
CCDC66-202ENST00000341455 DUTP33316 252 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms