RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 SBSPONQ8IVN8 264 aa10.38□□□□□ -0.75
GTF3C6-201ENST00000329970 FAM223AQ8IWN6 122 aa10.38□□□□□ -0.75
GTF3C6-201ENST00000329970 MMD2Q8IY49 270 aa10.38□□□□□ -0.75
GTF3C6-201ENST00000329970 LGALS14Q8TCE9 139 aa10.38□□□□□ -0.75
GTF3C6-201ENST00000329970 NUDCD2Q8WVJ2 157 aa10.38□□□□□ -0.75
GTF3C6-201ENST00000329970 PHB2Q99623 299 aa10.38□□□□□ -0.75
GTF3C6-201ENST00000329970 HSD17B10Q99714 261 aaKnown RBP10.38□□□□□ -0.75
GTF3C6-201ENST00000329970 SPIN2AQ99865 258 aa10.38□□□□□ -0.75
GTF3C6-201ENST00000329970 SPIN2BQ9BPZ2 258 aa10.38□□□□□ -0.75
GTF3C6-201ENST00000329970 RHBDL2Q9NX52 303 aa10.38□□□□□ -0.75
GTF3C6-201ENST00000329970 COA4Q9NYJ1 87 aa10.38□□□□□ -0.75
GTF3C6-201ENST00000329970 RRP15Q9Y3B9 282 aaKnown RBP10.38□□□□□ -0.75
GTF3C6-201ENST00000329970 TRIM64CA6NLI5 447 aa10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 H0Y980 276 aa10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 SSX5O60225 188 aa10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 FCGR3BO75015 233 aa10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 FRMD6-AS1P0C7T7 363 aa10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 NFYAP23511 347 aaPredicted RBP10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 SDC2P34741 201 aa10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 TATDN3Q17R31 274 aa10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 IL34Q6ZMJ4 242 aa10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 SLC25A42Q86VD7 318 aa10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 Q8N1Y9 231 aa10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 TTC9CQ8N5M4 171 aa10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 VSTM2AQ8TAG5 236 aa10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 OR51E2Q9H255 320 aa10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 ZNF430Q9H8G1 570 aaPredicted RBP10.37□□□□□ -0.75
GTF3C6-201ENST00000329970 IGKV1D-13A0A0B4J2D9 117 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 ANKRD34BA5PLL1 514 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 RBMXL2O75526 392 aaKnown RBP10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 ACTL6BO94805 426 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 OR2A4O95047 310 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 IGKV1-13P0DP09 117 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 MAS1LP35410 378 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 RPL30P62888 115 aaKnown RBP10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 KLK9Q2XQG4 91 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 ZNF66Q6ZN08 573 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 IDO2Q6ZQW0 420 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 PUSL1Q8N0Z8 303 aaKnown RBP10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 OR4S2Q8NH73 311 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 TMEM167AQ8TBQ9 72 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 ACOT12Q8WYK0 555 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 SNAPC3Q92966 411 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 SLC25A38Q96DW6 304 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 RCHY1Q96PM5 261 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 C19orf73Q9NVV2 129 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 KLK9Q9UKQ9 250 aa10.36□□□□□ -0.75
GTF3C6-201ENST00000329970 AIREO43918 545 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 KBTBD11O94819 623 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 IGHV4-30-4P0DP06 118 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 KIR2DS2P43631 304 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 SYNJ2BPP57105 145 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 RHOGP84095 191 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 ZNF45Q02386 682 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 RPEL1Q2QD12 228 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 KCTD21Q4G0X4 260 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 HOGA1Q86XE5 327 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 MFSD4AQ8N468 514 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 NECAP1Q8NC96 275 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 ZBTB34Q8NCN2 500 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 BEST4Q8NFU0 473 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 OR2K2Q8NGT1 345 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 TM2D3Q9BRN9 247 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 THAP7Q9BT49 309 aaPredicted RBP10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 RSRP1Q9BUV0 290 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 ZMAT4Q9H898 229 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 AKIP1Q9NQ31 210 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 PEMTQ9UBM1 199 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 ZNF257Q9Y2Q1 563 aa10.35□□□□□ -0.75
GTF3C6-201ENST00000329970 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.34□□□□□ -0.75
GTF3C6-201ENST00000329970 NPIPB5A8MRT5 1133 aa10.34□□□□□ -0.75
GTF3C6-201ENST00000329970 MPPED1O15442 326 aa10.34□□□□□ -0.75
GTF3C6-201ENST00000329970 TRBV12-3P01733 135 aa10.34□□□□□ -0.75
GTF3C6-201ENST00000329970 CSN3P07498 182 aa10.34□□□□□ -0.75
GTF3C6-201ENST00000329970 MECP2P51608 486 aaKnown RBP10.34□□□□□ -0.75
GTF3C6-201ENST00000329970 BRWD1-AS2P59051 145 aa10.34□□□□□ -0.75
GTF3C6-201ENST00000329970 LCN12Q6JVE5 192 aa10.34□□□□□ -0.75
GTF3C6-201ENST00000329970 SGPP2Q8IWX5 399 aa10.34□□□□□ -0.75
GTF3C6-201ENST00000329970 Q8N402 240 aa10.34□□□□□ -0.75
GTF3C6-201ENST00000329970 OR5H6Q8NGV6 325 aa10.34□□□□□ -0.75
GTF3C6-201ENST00000329970 OR2A7Q96R45 310 aa10.34□□□□□ -0.75
GTF3C6-201ENST00000329970 DCUN1D5Q9BTE7 237 aa10.34□□□□□ -0.75
GTF3C6-201ENST00000329970 SPATA2Q9UM82 520 aa10.34□□□□□ -0.75
GTF3C6-201ENST00000329970 TEX22C9J3V5 150 aa10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 J3QRK9 145 aa10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 BMPR1BO00238 502 aa10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 RBFOX2O43251 390 aaKnown RBP eCLIP10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 HRASP01112 189 aa10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 CRYGCP07315 174 aa10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 FGF2P09038 288 aa10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 CLEC2LP0C7M8 214 aa10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 ZNF735P0CB33 412 aa10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 APELAP0DMC3 54 aa10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 CBX5P45973 191 aa10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 ARPC4P59998 168 aa10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 DEFA5Q01523 94 aa10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 MXD1Q05195 221 aa10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 ATP5G2Q06055 141 aa10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 EXOSC2Q13868 293 aaKnown RBP10.33□□□□□ -0.76
GTF3C6-201ENST00000329970 HAPLN4Q86UW8 402 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms