RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ATP6V1FQ16864 119 aa10.35□□□□□ -0.75
CHMP3-201ENST00000263856 TGIF2LYQ8IUE0 185 aa10.35□□□□□ -0.75
CHMP3-201ENST00000263856 ACY3Q96HD9 319 aa10.35□□□□□ -0.75
CHMP3-201ENST00000263856 TIMM9Q9Y5J7 89 aa10.35□□□□□ -0.75
CHMP3-201ENST00000263856 YLPM1P49750 1951 aaKnown RBP10.35□□□□□ -0.75
CHMP3-201ENST00000263856 RBFOX2O43251 390 aaKnown RBP eCLIP10.35□□□□□ -0.75
CHMP3-201ENST00000263856 SS18L1O75177 396 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-201ENST00000263856 BRWD1-AS2P59051 145 aa10.35□□□□□ -0.75
CHMP3-201ENST00000263856 RPL39P5Q59GN2 51 aa10.35□□□□□ -0.75
CHMP3-201ENST00000263856 COQ2Q96H96 371 aa10.35□□□□□ -0.75
CHMP3-201ENST00000263856 TBX15Q96SF7 602 aa10.35□□□□□ -0.75
CHMP3-201ENST00000263856 MBNL3Q9NUK0 354 aaKnown RBP10.35□□□□□ -0.75
CHMP3-201ENST00000263856 CFAP47Q6ZTR5 3102 aa10.35□□□□□ -0.75
CHMP3-201ENST00000263856 DCHS1Q96JQ0 3298 aa10.35□□□□□ -0.75
CHMP3-201ENST00000263856 TNCP24821 2201 aa10.35□□□□□ -0.75
CHMP3-201ENST00000263856 IGHV3OR15-7A0A075B7D8 119 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 GCGP01275 180 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 ADMP35318 185 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 CISD2Q8N5K1 135 aaKnown RBP10.34□□□□□ -0.75
CHMP3-201ENST00000263856 KLF14Q8TD94 323 aaPredicted RBP10.34□□□□□ -0.75
CHMP3-201ENST00000263856 CIB3Q96Q77 187 aaPredicted RBP10.34□□□□□ -0.75
CHMP3-201ENST00000263856 RYDENQ9NUL5 291 aaKnown RBP10.34□□□□□ -0.75
CHMP3-201ENST00000263856 DUSP13Q9UII6 198 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 NPIPB11E5RHQ5 1161 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 RRHO14718 337 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 CLDN14O95500 239 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 RAB4BP61018 213 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 NOL4LQ96MY1 436 aaPredicted RBP10.34□□□□□ -0.75
CHMP3-201ENST00000263856 TRIB1Q96RU8 372 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 PAM16Q9Y3D7 125 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 TRGV5A0A0B4J1U4 118 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 TRAV3A0A0B4J244 114 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 PMS2P5A8MQ11 134 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 SP1P08047 785 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 TMEM164Q5U3C3 297 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 FAM122AQ96E09 287 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 SFRP2Q96HF1 295 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 TAAR6Q96RI8 345 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 PYGO2Q9BRQ0 406 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 SAMD10Q9BYL1 202 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 HIPK2Q9H2X6 1198 aa10.34□□□□□ -0.75
CHMP3-201ENST00000263856 MRPS18CQ9Y3D5 142 aaKnown RBP10.34□□□□□ -0.75
CHMP3-201ENST00000263856 C15orf62A8K5M9 175 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 MLNRO43193 412 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 SRP14P37108 136 aaKnown RBP10.33□□□□□ -0.76
CHMP3-201ENST00000263856 ZNF146Q15072 292 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 SPATA31B1PQ5VZV4 182 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 VHLLQ6RSH7 139 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 CMTM2Q8TAZ6 248 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 WIPI2Q9Y4P8 454 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 PXMP4Q9Y6I8 212 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 INTS1Q8N201 2190 aaKnown RBP10.33□□□□□ -0.76
CHMP3-201ENST00000263856 CNOT1A5YKK6 2376 aaKnown RBP10.33□□□□□ -0.76
CHMP3-201ENST00000263856 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.33□□□□□ -0.76
CHMP3-201ENST00000263856 KLRC4-KLRK1H3BQV0 150 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 GGCTO75223 188 aaKnown RBP10.33□□□□□ -0.76
CHMP3-201ENST00000263856 ERVK11-1P61568 191 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 BAGE3Q86Y29 109 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 BAGE2Q86Y30 109 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 GBGT1Q8N5D6 347 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 MS4A5Q9H3V2 200 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 SPRR3Q9UBC9 169 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 NAGKQ9UJ70 344 aa10.33□□□□□ -0.76
CHMP3-201ENST00000263856 A6NNC1 897 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 RAB29O14966 203 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 SPINT2O43291 252 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 MYOD1P15172 320 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 IGHV1-2P23083 117 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 TCL1AP56279 114 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 ERVK-16P61578 105 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 OR5I1Q13606 314 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 RNFT1Q5M7Z0 435 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 SNHG12Q9BXW3 62 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 ARRDC1-AS1Q9H2J1 176 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 GCM1Q9NP62 436 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 MKRN2OSH3BPM6 223 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 FRMD6-AS1P0C7T7 363 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 FOXF2Q12947 444 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 ZNF124Q15973 351 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 ASPHD1Q5U4P2 390 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 RNASEH2CQ8TDP1 164 aaKnown RBP10.32□□□□□ -0.76
CHMP3-201ENST00000263856 LRRC29Q8WV35 223 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 TRBV20OR9-2A0A075B6H5 130 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 ZNF25P17030 456 aaPredicted RBP10.32□□□□□ -0.76
CHMP3-201ENST00000263856 IER3P46695 156 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 KIAA1644Q3SXP7 199 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 OR2Z1Q8NG97 314 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 OR10G8Q8NGN5 311 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 OCC1Q8TAD7 63 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 VN1R17PQ8TDU5 208 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 C2orf88Q9BSF0 95 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 PARD6AQ9NPB6 346 aa10.32□□□□□ -0.76
CHMP3-201ENST00000263856 POLR3KQ9Y2Y1 108 aaPredicted RBP10.32□□□□□ -0.76
CHMP3-201ENST00000263856 KLF13Q9Y2Y9 288 aaPredicted RBP10.32□□□□□ -0.76
CHMP3-201ENST00000263856 TET2Q6N021 2002 aaPredicted RBP10.31□□□□□ -0.76
CHMP3-201ENST00000263856 PDE6DO43924 150 aa10.31□□□□□ -0.76
CHMP3-201ENST00000263856 CD46P15529 392 aa10.31□□□□□ -0.76
CHMP3-201ENST00000263856 HLA-DRB5Q30154 266 aa10.31□□□□□ -0.76
CHMP3-201ENST00000263856 DHRS13Q6UX07 377 aa10.31□□□□□ -0.76
CHMP3-201ENST00000263856 FOXH1O75593 365 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms