RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Nupl2Q8CIC2 420 aaKnown RBP19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Znhit1Q8R331 154 aa19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Pdcd10Q8VE70 212 aa19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Olfr490Q8VFD2 314 aa19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Olfr195Q8VGQ6 308 aa19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Dyrk3Q922Y0 586 aa19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Tex13bQ99MW5 186 aa19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Kcnmb2Q9CZM9 235 aa19.16■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Esp15A8R0U8 85 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Gm21721J3QMK7 227 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Slc18a3O35304 530 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Prss39O70169 367 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Ifna1P01572 189 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Igsf11P0C673 428 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 TspoP50637 169 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Prop1P97458 223 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 March1Q6NZQ8 289 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 AtcayQ8BHE3 372 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Olfr1453Q8VFX0 307 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Lcn8Q924P3 175 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Ndufaf3Q9JKL4 185 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 1700025B11RikA0A087WNZ6 93 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Gm13547A2ARC0 163 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Olfr64F8VPZ8 307 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Mcpt9O35164 246 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 P01660 111 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Fgf2P15655 154 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 NfyaP23708 346 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Stfa2P35174 103 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 AmbpQ07456 349 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Rab42Q0PD08 215 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Klf14Q19A41 325 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Tmem231Q3U284 315 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Ceacam14Q78Y72 263 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Timm21Q8CCM6 249 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Gpr84Q8CIM5 396 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Lrrtm1Q8K377 522 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Vmn1r35Q8R2E2 296 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Uqcrfs1Q9CR68 274 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Ackr1Q9QUI6 334 aa19.15■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Col7a1Q63870 2944 aa19.14■□□□□ 0.66
Scn1b-201ENSMUST00000098548 Tcrg-V5A0A0G2JGV5 113 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Btbd35f23A0A0R4J2B9 498 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Pom121l12A0A1B0GSJ4 278 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Sult6b2B7ZWN4 290 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Rarres1F6ZIS7 283 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Gm20815J3KMI0 227 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Gm20914J3QME2 227 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Gm3685J3QPP2 205 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Gm10338K7N692 204 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Casp6O08738 276 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Mdh2P08249 338 aaKnown RBP19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Rab18P35293 206 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Rbp2Q08652 134 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Olfr1340Q3KPC7 315 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Q3KQP7 184 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Gpr160Q3U3F9 336 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Gm21292Q78EE2 227 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Mob1bQ8BPB0 216 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Cmc2Q8K199 79 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 DohhQ99LN9 302 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Slc25a22Q9D6M3 323 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Trem1Q9JKE2 230 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Rab25Q9WTL2 213 aa19.14■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Hivep2Q3UHF7 2430 aa19.13■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Olfr175-ps1A0A140T8K4 308 aa19.13■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Ube2dnl1A2AFH1 155 aa19.13■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Gm9972E9Q053 102 aa19.13■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Sp100O35892 482 aa19.13■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Sstr2P30875 369 aa19.13■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Ascl1Q02067 231 aa19.13■□□□□ 0.65
Scn1b-201ENSMUST00000098548 BaxQ07813 192 aa19.13■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Defb18Q30KP5 85 aa19.13■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Gal3st2cQ3ULK5 396 aa19.13■□□□□ 0.65
Scn1b-201ENSMUST00000098548 PiglQ5SX19 252 aa19.13■□□□□ 0.65
Scn1b-201ENSMUST00000098548 PirtQ8BFY0 135 aa19.13■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Serpinb1bQ8VHP7 382 aa19.13■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Wdr4Q9EP82 413 aa19.13■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Gm11565A2A4M7 156 aa19.12■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Gm5286E0CXI6 357 aa19.12■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Wnt2bO70283 389 aa19.12■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Foxa2P35583 459 aa19.12■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Aldh3a2P47740 484 aa19.12■□□□□ 0.65
Scn1b-201ENSMUST00000098548 CycsP62897 105 aaKnown RBP19.12■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Gm10192Q3V0S1 108 aa19.12■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Psg26Q4KL65 475 aa19.12■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Srrm4Q8BKA3 608 aa19.12■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Olfr122W4VSP0 330 aa19.12■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Bcl6bO88282 474 aa19.11■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Edn3P48299 214 aa19.11■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Rgs16P97428 201 aa19.11■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Ccdc190Q3URK1 288 aa19.11■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Epha5Q60629 876 aa19.11■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Lmf2Q8C3X8 702 aaKnown RBP19.11■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Nhlrc3Q8CCH2 347 aa19.11■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Olfr354Q8VGJ8 317 aa19.11■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Cst14Q8VII3 130 aa19.11■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Dtd1Q9DD18 209 aaKnown RBP19.11■□□□□ 0.65
Scn1b-201ENSMUST00000098548 Six6Q9QZ28 246 aa19.11■□□□□ 0.65
Scn1b-201ENSMUST00000098548 RbmxQ9WV02 391 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms