RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Gm2016Q3TQZ4 144 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm5662Q8BX20 144 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Vmn1r4Q8R2D3 297 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr1239Q8VGM8 305 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Rps21Q9CQR2 83 aaKnown RBP16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Reg4Q9D8G5 157 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr878Q9EQA9 314 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 A630073D07RikE9PWS6 100 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm20815J3KMI0 227 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 2010315B03RikJ3QK55 433 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm20914J3QME2 227 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Tcl1b2P56841 117 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Rhox4fQ2MDF8 205 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Rhox4cQ2MDG1 205 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Epha5Q60629 876 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm21292Q78EE2 227 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Sdhaf2Q8C6I2 164 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr512Q8VFZ4 326 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 D730048I06RikQ9CQB8 106 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Rhox4aQ9D3I8 205 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Q9DAL9 119 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Prok2Q9QXU7 128 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 TectbO08524 329 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Saa1P05366 122 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 PtcraP0C6B2 199 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Bcl2l2P70345 193 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr1340Q3KPC7 315 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gal3st2cQ3ULK5 396 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Slc7a15Q50E62 488 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Oas1bQ60856 376 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr1000Q7TR99 314 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr222Q7TS30 318 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Fam234aQ8C0Z1 555 aa16.11■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Ranbp2Q9ERU9 3053 aaKnown RBP16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm39566A0A1B0GT45 1251 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Ifna2P01573 190 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 BlkP16277 499 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 CebpbP28033 296 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Defa11P50709 85 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 ApodP51910 189 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Polr2gP62488 172 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Cdv3Q4VAA2 281 aaKnown RBP16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Slc25a26Q5U680 274 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Slc34a1Q60825 637 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Plcxd1Q8CHS4 345 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Defb7Q91V70 71 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Mrpl49Q9CQ40 166 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Cbln3Q9JHG0 197 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Ints1Q6P4S8 2195 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Plxnb1Q8CJH3 2119 aa16.1■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Adam6aB2RSY5 754 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm3676D3Z236 184 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 PrkacaP05132 351 aaKnown RBP16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Csf3P09920 208 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Nkx2-1P50220 372 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Slc45a2P58355 530 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 S100a3P62818 101 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Otx2P80206 289 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Mindy2Q6PDI6 601 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Cd200r4Q6XJV4 270 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 BC049762Q8C601 163 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Trib3Q8K4K2 354 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Ndufb8Q9D6J5 186 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm29049A0A087WSM5 227 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr555E9Q547 315 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr204E9Q8M0 305 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Vmn1r167G3UW71 315 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm21118J3QPK8 227 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 H2-M10.1O19443 331 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Pitx3O35160 302 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Wipf3P0C7L0 485 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Rnd3P61588 244 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm20909Q5FWB5 227 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm20852Q5M8R5 227 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm20917Q62457 227 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm20809Q62458 227 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm20865Q62460 227 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm20738Q810R8 227 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Arl14epQ8BIX3 276 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Cpne4Q8BLR2 557 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 B4galt7Q8R087 327 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Rbpms2Q8VC52 206 aaKnown RBP16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Osr2Q91ZD1 312 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 9130008F23RikQ9D2Z6 181 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm20806Q9D9T3 227 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Plekha2Q9ERS5 425 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Kcnip1Q9JJ57 227 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Mmp24Q9R0S2 618 aa16.09■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm20918J3QN17 227 aa16.08■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Otx1P80205 355 aa16.08■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Mcrip1Q3UGS4 97 aa16.08■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Fam220aQ3ZN08 260 aa16.08■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 9430097D07RikQ8BS47 195 aa16.08■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Osbpl11Q8CI95 751 aa16.08■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr1368Q8VFG3 314 aa16.08■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr494Q8VG07 314 aa16.08■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Cavin3Q91VJ2 260 aa16.08■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr155Q9QZ22 319 aa16.08■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Pkd1l3Q2EG98 2201 aa16.08■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Vmn1r34G3XA52 309 aa16.08■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 47.8 ms