RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 OPT1P40897 799 aa2.33□□□□□ -2.04
snR49snR49 COQ6P53318 479 aa2.33□□□□□ -2.04
snR49snR49 RCR2Q03446 210 aaKnown RBP2.33□□□□□ -2.04
snR49snR49 VBA4Q04602 768 aaKnown RBP2.33□□□□□ -2.04
snR49snR49 NDD1Q08887 554 aa2.33□□□□□ -2.04
snR49snR49 HER1Q12276 1246 aa2.33□□□□□ -2.04
snR49snR49 YLR111WQ12528 110 aa2.33□□□□□ -2.04
snR49snR49 SEC3P33332 1336 aaKnown RBP2.33□□□□□ -2.04
snR49snR49 YMR084WA2P2R3 262 aa2.32□□□□□ -2.04
snR49snR49 SRD1P09007 221 aa2.32□□□□□ -2.04
snR49snR49 YMR085WP0CF18 432 aa2.32□□□□□ -2.04
snR49snR49 YER190C-BP0CX94 160 aa2.32□□□□□ -2.04
snR49snR49 YEL077W-AP0CX95 160 aa2.32□□□□□ -2.04
snR49snR49 YGR296C-BP0CX96 160 aa2.32□□□□□ -2.04
snR49snR49 YPL283W-BP0CX97 160 aa2.32□□□□□ -2.04
snR49snR49 YPR204C-AP0CX98 160 aa2.32□□□□□ -2.04
snR49snR49 MEF1P25039 761 aa2.32□□□□□ -2.04
snR49snR49 CNE1P27825 502 aa2.32□□□□□ -2.04
snR49snR49 YAT2P40017 923 aa2.32□□□□□ -2.04
snR49snR49 TMN3P40071 706 aa2.32□□□□□ -2.04
snR49snR49 YFL015CP43578 164 aa2.32□□□□□ -2.04
snR49snR49 ATG33Q06485 197 aa2.32□□□□□ -2.04
snR49snR49 BSP1Q06604 576 aa2.32□□□□□ -2.04
snR49snR49 YOR111WQ99210 232 aa2.32□□□□□ -2.04
snR49snR49 WHI2P12611 486 aa2.31□□□□□ -2.04
snR49snR49 IMG2P25642 146 aaPredicted RBP2.31□□□□□ -2.04
snR49snR49 GSY2P27472 705 aa2.31□□□□□ -2.04
snR49snR49 MGM1P32266 881 aa2.31□□□□□ -2.04
snR49snR49 MRPL7P36519 292 aa2.31□□□□□ -2.04
snR49snR49 PPE1P38796 400 aa2.31□□□□□ -2.04
snR49snR49 BEM4P39011 633 aa2.31□□□□□ -2.04
snR49snR49 OAF1P39720 1047 aaPredicted RBP2.31□□□□□ -2.04
snR49snR49 DOT6P40059 670 aaKnown RBP2.31□□□□□ -2.04
snR49snR49 AIM14P53109 570 aa2.31□□□□□ -2.04
snR49snR49 GPD1Q00055 391 aaKnown RBP2.31□□□□□ -2.04
snR49snR49 MFM1Q02783 413 aa2.31□□□□□ -2.04
snR49snR49 YDL073WQ07454 984 aa2.31□□□□□ -2.04
snR49snR49 BUD7Q08754 746 aa2.31□□□□□ -2.04
snR49snR49 RDL1Q12305 139 aaKnown RBP2.31□□□□□ -2.04
snR49snR49 YPT1P01123 206 aaKnown RBP2.3□□□□□ -2.04
snR49snR49 HMG1P12683 1054 aa2.3□□□□□ -2.04
snR49snR49 IME1P21190 360 aa2.3□□□□□ -2.04
snR49snR49 GSY1P23337 708 aa2.3□□□□□ -2.04
snR49snR49 FLO5P38894 1075 aa2.3□□□□□ -2.04
snR49snR49 DSS1P39112 969 aa2.3□□□□□ -2.04
snR49snR49 BUD17P53727 317 aa2.3□□□□□ -2.04
snR49snR49 EFR3Q03653 782 aaKnown RBP2.3□□□□□ -2.04
snR49snR49 YTH1Q06102 208 aaPredicted RBP2.3□□□□□ -2.04
snR49snR49 SRL1Q08673 210 aa2.3□□□□□ -2.04
snR49snR49 PRP22P24384 1145 aaKnown RBP2.29□□□□□ -2.04
snR49snR49 YKU70P32807 602 aa2.29□□□□□ -2.04
snR49snR49 YMR124WP39523 943 aaKnown RBP2.29□□□□□ -2.04
snR49snR49 CHZ1P40019 153 aaPredicted RBP2.29□□□□□ -2.04
snR49snR49 YIL024CP40543 189 aa2.29□□□□□ -2.04
snR49snR49 BUD8P41698 603 aa2.29□□□□□ -2.04
snR49snR49 MRPL1Q04599 285 aa2.29□□□□□ -2.04
snR49snR49 SCW10Q04951 389 aa2.29□□□□□ -2.04
snR49snR49 CDC53Q12018 815 aaKnown RBP2.29□□□□□ -2.04
snR49snR49 SAE2P46946 345 aa2.28□□□□□ -2.04
snR49snR49 YGR054WP53235 642 aaKnown RBP2.28□□□□□ -2.04
snR49snR49 FDC1Q03034 503 aa2.28□□□□□ -2.04
snR49snR49 COG8Q04632 607 aa2.28□□□□□ -2.04
snR49snR49 NSE3Q05541 303 aa2.28□□□□□ -2.04
snR49snR49 YPS7Q06325 596 aa2.28□□□□□ -2.04
snR49snR49 SPN1Q06505 410 aaPredicted RBP2.28□□□□□ -2.04
snR49snR49 SNA4Q07549 140 aa2.28□□□□□ -2.04
snR49snR49 YPL216WQ08964 1102 aa2.28□□□□□ -2.04
snR49snR49 GIN4Q12263 1142 aa2.28□□□□□ -2.04
snR49snR49 STI1P15705 589 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
snR49snR49 RNR3P21672 869 aaKnown RBP2.27□□□□□ -2.05
snR49snR49 YCP4P25349 247 aaKnown RBP2.27□□□□□ -2.05
snR49snR49 PCL2P25693 308 aa2.27□□□□□ -2.05
snR49snR49 SRP40P32583 406 aaPredicted RBP2.27□□□□□ -2.05
snR49snR49 ATO2P32907 282 aa2.27□□□□□ -2.05
snR49snR49 PEX6P33760 1030 aa2.27□□□□□ -2.05
snR49snR49 PCM1P38628 557 aaKnown RBP2.27□□□□□ -2.05
snR49snR49 CFD1P40558 293 aa2.27□□□□□ -2.05
snR49snR49 TDA10P42938 290 aa2.27□□□□□ -2.05
snR49snR49 LYS20P48570 428 aaKnown RBP2.27□□□□□ -2.05
snR49snR49 COP1P53622 1201 aaKnown RBP2.27□□□□□ -2.05
snR49snR49 RPS15Q01855 142 aaKnown RBP2.27□□□□□ -2.05
snR49snR49 TIM50Q02776 476 aa2.27□□□□□ -2.05
snR49snR49 YMR210WQ03649 449 aa2.27□□□□□ -2.05
snR49snR49 CEF1Q03654 590 aaPredicted RBP2.27□□□□□ -2.05
snR49snR49 TAF7Q05021 590 aa2.27□□□□□ -2.05
snR49snR49 YLR407WQ06070 228 aa2.27□□□□□ -2.05
snR49snR49 YPT10P38146 199 aa2.26□□□□□ -2.05
snR49snR49 CRG1P38892 291 aaRIP-Chip data2.26□□□□□ -2.05not detected
snR49snR49 PXA1P41909 870 aa2.26□□□□□ -2.05
snR49snR49 ENP2P48234 707 aaKnown RBP2.26□□□□□ -2.05
snR49snR49 SAP4P53036 818 aa2.26□□□□□ -2.05
snR49snR49 SPO1P53541 631 aa2.26□□□□□ -2.05
snR49snR49 RPL15BP54780 204 aaPredicted RBP2.26□□□□□ -2.05
snR49snR49 ENT2Q05785 613 aa2.26□□□□□ -2.05
snR49snR49 TPO3Q06451 622 aa2.26□□□□□ -2.05
snR49snR49 YEL076C-AP0CX16 216 aa2.25□□□□□ -2.05
snR49snR49 YLR464WP0CX17 216 aa2.25□□□□□ -2.05
snR49snR49 YKR075CP36155 307 aa2.25□□□□□ -2.05
snR49snR49 MAL31P38156 614 aa2.25□□□□□ -2.05
snR49snR49 CDS1P38221 457 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms