RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN7	YPR108W	HSP60	P19882	572 aa	Known RBP	6.08	□□□□□ -1.44
RPN7	YPR108W	TRX1	P22217	103 aa	Known RBP	6.08	□□□□□ -1.44
RPN7	YPR108W	YJU3	P28321	313 aa		6.08	□□□□□ -1.44
RPN7	YPR108W	TMT1	P32643	299 aa		6.08	□□□□□ -1.44
RPN7	YPR108W	TBS1	P38114	1094 aa		6.08	□□□□□ -1.44
RPN7	YPR108W	FZO1	P38297	855 aa		6.08	□□□□□ -1.44
RPN7	YPR108W	SAH1	P39954	449 aa	Known RBP	6.08	□□□□□ -1.44
RPN7	YPR108W	BRO1	P48582	844 aa		6.08	□□□□□ -1.44
RPN7	YPR108W	ORC5	P50874	479 aa		6.08	□□□□□ -1.44
RPN7	YPR108W	TAF6	P53040	516 aa		6.08	□□□□□ -1.44
RPN7	YPR108W	TAD1	P53065	400 aa		6.08	□□□□□ -1.44
RPN7	YPR108W	ALG11	P53954	548 aa	Known RBP	6.08	□□□□□ -1.44
RPN7	YPR108W	GPD1	Q00055	391 aa	Known RBP	6.08	□□□□□ -1.44
RPN7	YPR108W	GYL1	Q04322	720 aa		6.08	□□□□□ -1.44
RPN7	YPR108W	SIL1	Q08199	421 aa		6.08	□□□□□ -1.44
RPN7	YPR108W	AIM39	Q08223	395 aa		6.08	□□□□□ -1.44
RPN7	YPR108W	RRP36	Q12481	300 aa	Predicted RBP	6.08	□□□□□ -1.44
RPN7	YPR108W	ECM3	Q99252	613 aa		6.08	□□□□□ -1.44
RPN7	YPR108W	YML002W	P0CF17	737 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	YMR085W	P0CF18	432 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	GPA2	P10823	449 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	POX1	P13711	748 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	PUT4	P15380	627 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	SRV2	P17555	526 aa	Known RBP	6.07	□□□□□ -1.44
RPN7	YPR108W	CLB3	P24870	427 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	KIN82	P25341	720 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	YCR051W	P25631	222 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	NIP1	P32497	812 aa	Known RBP	6.07	□□□□□ -1.44
RPN7	YPR108W	MSG5	P38590	489 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	DIA4	P38705	446 aa	Predicted RBP	6.07	□□□□□ -1.44
RPN7	YPR108W	SAP1	P39955	897 aa	Known RBP	6.07	□□□□□ -1.44
RPN7	YPR108W	TMN3	P40071	706 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	YJL132W	P47014	750 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	URB2	P47108	1174 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	BFA1	P47113	574 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	RPS7B	P48164	190 aa	Known RBP	6.07	□□□□□ -1.44
RPN7	YPR108W	YGL036W	P53185	909 aa	Predicted RBP	6.07	□□□□□ -1.44
RPN7	YPR108W	YNL058C	P53947	316 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	GTR1	Q00582	310 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	MZM1	Q03429	123 aa	Predicted RBP	6.07	□□□□□ -1.44
RPN7	YPR108W	FAR8	Q05040	523 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	YLR225C	Q05948	407 aa	Known RBP	6.07	□□□□□ -1.44
RPN7	YPR108W	DUS4	Q06063	367 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	LCB5	Q06147	687 aa	Known RBP	6.07	□□□□□ -1.44
RPN7	YPR108W	AAD15	Q08361	143 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	DNL4	Q08387	944 aa	Predicted RBP	6.07	□□□□□ -1.44
RPN7	YPR108W	THI21	Q08975	551 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	YOR223W	Q12015	292 aa		6.07	□□□□□ -1.44
RPN7	YPR108W	FAP7	Q12055	197 aa	Predicted RBP	6.07	□□□□□ -1.44
RPN7	YPR108W	PUS1	Q12211	544 aa	Known RBP	6.07	□□□□□ -1.44
RPN7	YPR108W	GCR1	P07261	785 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	HEM1	P09950	548 aa	Predicted RBP	6.06	□□□□□ -1.44
RPN7	YPR108W	TRM1	P15565	570 aa	Known RBP	6.06	□□□□□ -1.44
RPN7	YPR108W	RRT12	P25381	491 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	SSE1	P32589	693 aa	Known RBP	6.06	□□□□□ -1.44
RPN7	YPR108W	GYP6	P32806	458 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	ASH1	P34233	588 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	6.06	□□□□□ -1.44	not detected
RPN7	YPR108W	MSR1	P38714	643 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	CKB2	P38930	258 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	ERP2	P39704	215 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	RIO2	P40160	425 aa	Known RBP	6.06	□□□□□ -1.44
RPN7	YPR108W	SMX2	P40204	77 aa	Known RBP	6.06	□□□□□ -1.44
RPN7	YPR108W	SAE2	P46946	345 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	VTC4	P47075	721 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	YJR107W	P47145	328 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	RIM8	P53179	542 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	PEX31	P53203	462 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	LSC1	P53598	329 aa	Known RBP	6.06	□□□□□ -1.44
RPN7	YPR108W	RCF2	P53721	224 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	CUS1	Q02554	436 aa	Predicted RBP	6.06	□□□□□ -1.44
RPN7	YPR108W	RKM2	Q03942	479 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	YDR222W	Q04925	415 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	TAF9	Q05027	157 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	KAP95	Q06142	861 aa	Known RBP	6.06	□□□□□ -1.44
RPN7	YPR108W	THI20	Q08224	551 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	YDR018C	Q12185	396 aa		6.06	□□□□□ -1.44
RPN7	YPR108W	ILS1	P09436	1072 aa	Known RBP	6.05	□□□□□ -1.44
RPN7	YPR108W	CDC42	P19073	191 aa		6.05	□□□□□ -1.44
RPN7	YPR108W	RNR1	P21524	888 aa	Known RBP	6.05	□□□□□ -1.44
RPN7	YPR108W	LRE1	P25579	583 aa	Known RBP	6.05	□□□□□ -1.44
RPN7	YPR108W	FUB1	P25659	250 aa		6.05	□□□□□ -1.44
RPN7	YPR108W	KES1	P35844	434 aa	Known RBP	6.05	□□□□□ -1.44
RPN7	YPR108W	DBP7	P36120	742 aa	Known RBP	6.05	□□□□□ -1.44
RPN7	YPR108W	SET3	P36124	751 aa		6.05	□□□□□ -1.44
RPN7	YPR108W	LIN1	P38852	340 aa	Predicted RBP	6.05	□□□□□ -1.44
RPN7	YPR108W	YAP1801	P38856	637 aa		6.05	□□□□□ -1.44
RPN7	YPR108W	SPC97	P38863	823 aa		6.05	□□□□□ -1.44
RPN7	YPR108W	PNT1	P38969	423 aa		6.05	□□□□□ -1.44
RPN7	YPR108W	YNL320W	P42840	284 aa		6.05	□□□□□ -1.44
RPN7	YPR108W	ZIP2	P53061	704 aa		6.05	□□□□□ -1.44
RPN7	YPR108W	YNL040W	P53960	456 aa	Predicted RBP	6.05	□□□□□ -1.44
RPN7	YPR108W	ARO80	Q04052	950 aa		6.05	□□□□□ -1.44
RPN7	YPR108W	PPM1	Q04081	328 aa		6.05	□□□□□ -1.44
RPN7	YPR108W	YLL056C	Q12177	298 aa		6.05	□□□□□ -1.44
RPN7	YPR108W	CMD1	P06787	147 aa	Known RBP	6.04	□□□□□ -1.44
RPN7	YPR108W	MAS2	P11914	482 aa		6.04	□□□□□ -1.44
RPN7	YPR108W	PRP9	P19736	530 aa	Known RBP	6.04	□□□□□ -1.44
RPN7	YPR108W	MGT1	P26188	188 aa		6.04	□□□□□ -1.44
RPN7	YPR108W	RPC19	P28000	142 aa	Known RBP	6.04	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 83.1 ms