RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W MDV1P47025 714 aa0.66□□□□□ -2.3
RDS3YPR094W YIP4P53093 235 aa0.66□□□□□ -2.3
RDS3YPR094W HOS2P53096 452 aaPredicted RBP0.66□□□□□ -2.3
RDS3YPR094W NPY1P53164 384 aa0.66□□□□□ -2.3
RDS3YPR094W COQ6P53318 479 aa0.66□□□□□ -2.3
RDS3YPR094W DAK1P54838 584 aaKnown RBP0.66□□□□□ -2.3
RDS3YPR094W TAF8Q03750 510 aa0.66□□□□□ -2.3
RDS3YPR094W SMA2Q04658 369 aa0.66□□□□□ -2.3
RDS3YPR094W ENT2Q05785 613 aa0.66□□□□□ -2.3
RDS3YPR094W JIP5Q06214 492 aaPredicted RBP0.66□□□□□ -2.3
RDS3YPR094W GRS2Q06817 618 aa0.66□□□□□ -2.3
RDS3YPR094W SPO75Q07798 868 aa0.66□□□□□ -2.3
RDS3YPR094W POM34Q12445 299 aa0.66□□□□□ -2.3
RDS3YPR094W YMR084WA2P2R3 262 aa0.65□□□□□ -2.31
RDS3YPR094W CNE1P27825 502 aa0.65□□□□□ -2.31
RDS3YPR094W MCD4P36051 919 aa0.65□□□□□ -2.31
RDS3YPR094W MTG2P38860 518 aa0.65□□□□□ -2.31
RDS3YPR094W YIL169CP40442 995 aa0.65□□□□□ -2.31
RDS3YPR094W YIR016WP40572 265 aa0.65□□□□□ -2.31
RDS3YPR094W AZF1P41696 914 aa0.65□□□□□ -2.31
RDS3YPR094W THI6P41835 540 aa0.65□□□□□ -2.31
RDS3YPR094W SAE2P46946 345 aa0.65□□□□□ -2.31
RDS3YPR094W ATG36P46983 293 aa0.65□□□□□ -2.31
RDS3YPR094W SET2P46995 733 aaKnown RBP0.65□□□□□ -2.31
RDS3YPR094W BRE5P53741 515 aaKnown RBP0.65□□□□□ -2.31
RDS3YPR094W BOP3P53958 396 aa0.65□□□□□ -2.31
RDS3YPR094W ALD6P54115 500 aaKnown RBP0.65□□□□□ -2.31
RDS3YPR094W YMR034CQ05131 434 aaPredicted RBP0.65□□□□□ -2.31
RDS3YPR094W RPN7Q06103 429 aaKnown RBP0.65□□□□□ -2.31
RDS3YPR094W TPO3Q06451 622 aa0.65□□□□□ -2.31
RDS3YPR094W ISA1Q07821 250 aaPredicted RBP0.65□□□□□ -2.31
RDS3YPR094W CIT1P00890 479 aa0.64□□□□□ -2.31
RDS3YPR094W GAL4P04386 881 aa0.64□□□□□ -2.31
RDS3YPR094W WHI2P12611 486 aa0.64□□□□□ -2.31
RDS3YPR094W ACO1P19414 778 aaKnown RBP RIP-Chip data0.64□□□□□ -2.31not detected
RDS3YPR094W HSP60P19882 572 aaKnown RBP0.64□□□□□ -2.31
RDS3YPR094W SAN1P22470 610 aa0.64□□□□□ -2.31
RDS3YPR094W SCT1P32784 759 aa0.64□□□□□ -2.31
RDS3YPR094W MTC2P34246 357 aa0.64□□□□□ -2.31
RDS3YPR094W YKR018CP36114 725 aa0.64□□□□□ -2.31
RDS3YPR094W APN2P38207 520 aa0.64□□□□□ -2.31
RDS3YPR094W DHH1P39517 506 aaKnown RBP0.64□□□□□ -2.31
RDS3YPR094W IRC7P43623 340 aa0.64□□□□□ -2.31
RDS3YPR094W BIT61P47041 543 aa0.64□□□□□ -2.31
RDS3YPR094W RTA1P53047 317 aa0.64□□□□□ -2.31
RDS3YPR094W PCL10P53124 433 aa0.64□□□□□ -2.31
RDS3YPR094W SPN1Q06505 410 aaPredicted RBP0.64□□□□□ -2.31
RDS3YPR094W YDL124WQ07551 312 aaKnown RBP0.64□□□□□ -2.31
RDS3YPR094W ATX2Q12067 313 aa0.64□□□□□ -2.31
RDS3YPR094W UBX3Q12229 455 aa0.64□□□□□ -2.31
RDS3YPR094W RAD4P14736 754 aa0.63□□□□□ -2.31
RDS3YPR094W FRS1P15624 595 aaKnown RBP0.63□□□□□ -2.31
RDS3YPR094W RNR3P21672 869 aaKnown RBP0.63□□□□□ -2.31
RDS3YPR094W SEC15P22224 910 aa0.63□□□□□ -2.31
RDS3YPR094W COQ3P27680 312 aa0.63□□□□□ -2.31
RDS3YPR094W RPT3P33298 428 aaKnown RBP0.63□□□□□ -2.31
RDS3YPR094W MNN4P36044 1178 aa0.63□□□□□ -2.31
RDS3YPR094W YPT10P38146 199 aa0.63□□□□□ -2.31
RDS3YPR094W PCA1P38360 1216 aa0.63□□□□□ -2.31
RDS3YPR094W PPE1P38796 400 aa0.63□□□□□ -2.31
RDS3YPR094W RPN10P38886 268 aaKnown RBP0.63□□□□□ -2.31
RDS3YPR094W YHR202WP38887 602 aa0.63□□□□□ -2.31
RDS3YPR094W TMN3P40071 706 aa0.63□□□□□ -2.31
RDS3YPR094W TDA10P42938 290 aa0.63□□□□□ -2.31
RDS3YPR094W YGR125WP53273 1036 aa0.63□□□□□ -2.31
RDS3YPR094W BUD17P53727 317 aa0.63□□□□□ -2.31
RDS3YPR094W MFM1Q02783 413 aa0.63□□□□□ -2.31
RDS3YPR094W YPL071CQ02864 156 aa0.63□□□□□ -2.31
RDS3YPR094W RCR2Q03446 210 aaKnown RBP0.63□□□□□ -2.31
RDS3YPR094W EFR3Q03653 782 aaKnown RBP0.63□□□□□ -2.31
RDS3YPR094W HRD3Q05787 833 aa0.63□□□□□ -2.31
RDS3YPR094W YDL073WQ07454 984 aa0.63□□□□□ -2.31
RDS3YPR094W DSE3Q08729 430 aa0.63□□□□□ -2.31
RDS3YPR094W PCL8Q08966 492 aa0.63□□□□□ -2.31
RDS3YPR094W OSH2Q12451 1283 aa0.63□□□□□ -2.31
RDS3YPR094W YFL068WP0CX99 160 aa0.62□□□□□ -2.31
RDS3YPR094W YLL066W-AP0CY00 160 aa0.62□□□□□ -2.31
RDS3YPR094W YLL067W-AP0CY01 160 aa0.62□□□□□ -2.31
RDS3YPR094W NAP1P25293 417 aaKnown RBP0.62□□□□□ -2.31
RDS3YPR094W KIN82P25341 720 aa0.62□□□□□ -2.31
RDS3YPR094W LSB5P25369 354 aa0.62□□□□□ -2.31
RDS3YPR094W PPZ1P26570 692 aa0.62□□□□□ -2.31
RDS3YPR094W YJU2P28320 278 aaPredicted RBP0.62□□□□□ -2.31
RDS3YPR094W SRP40P32583 406 aaPredicted RBP0.62□□□□□ -2.31
RDS3YPR094W TIF3P34167 436 aaKnown RBP0.62□□□□□ -2.31
RDS3YPR094W IMD2P38697 523 aaKnown RBP0.62□□□□□ -2.31
RDS3YPR094W YHR020WP38708 688 aaKnown RBP0.62□□□□□ -2.31
RDS3YPR094W SSZ1P38788 538 aaKnown RBP0.62□□□□□ -2.31
RDS3YPR094W VRG4P40107 337 aa0.62□□□□□ -2.31
RDS3YPR094W HUL4P40985 892 aa0.62□□□□□ -2.31
RDS3YPR094W IMD3P50095 523 aaKnown RBP0.62□□□□□ -2.31
RDS3YPR094W SAP4P53036 818 aa0.62□□□□□ -2.31
RDS3YPR094W SPO1P53541 631 aa0.62□□□□□ -2.31
RDS3YPR094W APJ1P53940 528 aa0.62□□□□□ -2.31
RDS3YPR094W RPS15Q01855 142 aaKnown RBP0.62□□□□□ -2.31
RDS3YPR094W TIM50Q02776 476 aa0.62□□□□□ -2.31
RDS3YPR094W NAN1Q02931 896 aaKnown RBP0.62□□□□□ -2.31
RDS3YPR094W ADD37Q03233 198 aa0.62□□□□□ -2.31
RDS3YPR094W WAR1Q03631 944 aa0.62□□□□□ -2.31
RDS3YPR094W YML020WQ03722 664 aa0.62□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms