RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeast

Gene YDC1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDC1	YPL087W	ZRT2	Q12436	422 aa		5.76	□□□□□ -1.49
YDC1	YPL087W	POM34	Q12445	299 aa		5.76	□□□□□ -1.49
YDC1	YPL087W	APM4	Q99186	491 aa		5.76	□□□□□ -1.49
YDC1	YPL087W	SEC3	P33332	1336 aa	Known RBP	5.75	□□□□□ -1.49
YDC1	YPL087W	SWI6	P09959	803 aa		5.75	□□□□□ -1.49
YDC1	YPL087W	CDC43	P18898	376 aa		5.75	□□□□□ -1.49
YDC1	YPL087W	PRP28	P23394	588 aa		5.75	□□□□□ -1.49
YDC1	YPL087W	IMG2	P25642	146 aa	Predicted RBP	5.75	□□□□□ -1.49
YDC1	YPL087W	SEC65	P29478	273 aa		5.75	□□□□□ -1.49
YDC1	YPL087W	CBR1	P38626	284 aa	Known RBP	5.75	□□□□□ -1.49
YDC1	YPL087W	PCL5	P38794	229 aa		5.75	□□□□□ -1.49
YDC1	YPL087W	LYS9	P38999	446 aa		5.75	□□□□□ -1.49
YDC1	YPL087W	DUG1	P43616	481 aa	Known RBP	5.75	□□□□□ -1.49
YDC1	YPL087W	STU2	P46675	888 aa		5.75	□□□□□ -1.49
YDC1	YPL087W	ENP2	P48234	707 aa	Known RBP	5.75	□□□□□ -1.49
YDC1	YPL087W	PAN2	P53010	1115 aa	Predicted RBP	5.75	□□□□□ -1.49
YDC1	YPL087W	ECM3	Q99252	613 aa		5.75	□□□□□ -1.49
YDC1	YPL087W	RPS9B	P05755	195 aa	Known RBP	5.74	□□□□□ -1.49
YDC1	YPL087W	ABF1	P14164	731 aa		5.74	□□□□□ -1.49
YDC1	YPL087W	ERG6	P25087	383 aa	Known RBP	5.74	□□□□□ -1.49
YDC1	YPL087W	NTH1	P32356	751 aa		5.74	□□□□□ -1.49
YDC1	YPL087W	YKU70	P32807	602 aa		5.74	□□□□□ -1.49
YDC1	YPL087W	SFB3	P38810	929 aa		5.74	□□□□□ -1.49
YDC1	YPL087W	GET2	P40056	285 aa		5.74	□□□□□ -1.49
YDC1	YPL087W	BUD21	Q08492	214 aa	Predicted RBP	5.74	□□□□□ -1.49
YDC1	YPL087W	TRE2	Q08693	809 aa		5.74	□□□□□ -1.49
YDC1	YPL087W	BIT2	P38346	545 aa		5.73	□□□□□ -1.49
YDC1	YPL087W	PAF1	P38351	445 aa		5.73	□□□□□ -1.49
YDC1	YPL087W	DUN1	P39009	513 aa		5.73	□□□□□ -1.49
YDC1	YPL087W	ARG2	P40360	574 aa		5.73	□□□□□ -1.49
YDC1	YPL087W	PXA1	P41909	870 aa		5.73	□□□□□ -1.49
YDC1	YPL087W	NOP15	P53927	220 aa	Predicted RBP	5.73	□□□□□ -1.49
YDC1	YPL087W	MUK1	Q02866	612 aa		5.73	□□□□□ -1.49
YDC1	YPL087W	THI22	Q06490	572 aa		5.73	□□□□□ -1.49
YDC1	YPL087W	HFI1	Q12060	488 aa		5.73	□□□□□ -1.49
YDC1	YPL087W	RMP1	Q12530	201 aa		5.73	□□□□□ -1.49
YDC1	YPL087W	OAF3	P36023	863 aa		5.72	□□□□□ -1.49
YDC1	YPL087W	BIT61	P47041	543 aa		5.72	□□□□□ -1.49
YDC1	YPL087W	PDR5	P33302	1511 aa	Known RBP	5.72	□□□□□ -1.49
YDC1	YPL087W	SEC7	P11075	2009 aa	Known RBP	5.72	□□□□□ -1.49
YDC1	YPL087W	RPS17A	P02407	136 aa	Known RBP	5.71	□□□□□ -1.5
YDC1	YPL087W	RPS17B	P14127	136 aa	Known RBP	5.71	□□□□□ -1.5
YDC1	YPL087W	AEP2	P22136	580 aa		5.71	□□□□□ -1.5
YDC1	YPL087W	DMC1	P25453	334 aa		5.71	□□□□□ -1.5
YDC1	YPL087W	PHO11	P35842	467 aa		5.71	□□□□□ -1.5
YDC1	YPL087W	PHO12	P38693	467 aa		5.71	□□□□□ -1.5
YDC1	YPL087W	HXT6	P39003	570 aa	Known RBP	5.71	□□□□□ -1.5
YDC1	YPL087W	HXT7	P39004	570 aa		5.71	□□□□□ -1.5
YDC1	YPL087W	YNL195C	P40168	261 aa		5.71	□□□□□ -1.5
YDC1	YPL087W	SDS3	P40505	327 aa		5.71	□□□□□ -1.5
YDC1	YPL087W	CTR1	P49573	406 aa		5.71	□□□□□ -1.5
YDC1	YPL087W	RNR4	P49723	345 aa	Known RBP	5.71	□□□□□ -1.5
YDC1	YPL087W	FHN1	P53279	174 aa		5.71	□□□□□ -1.5
YDC1	YPL087W	ATG4	P53867	494 aa		5.71	□□□□□ -1.5
YDC1	YPL087W	SMX3	P54999	86 aa	Predicted RBP	5.71	□□□□□ -1.5
YDC1	YPL087W	NSE5	Q03718	556 aa		5.71	□□□□□ -1.5
YDC1	YPL087W	SSB1	P11484	613 aa	Known RBP	5.7	□□□□□ -1.5
YDC1	YPL087W	MRC1	P25588	1096 aa		5.7	□□□□□ -1.5
YDC1	YPL087W	BCS1	P32839	456 aa		5.7	□□□□□ -1.5
YDC1	YPL087W	SSB2	P40150	613 aa	Known RBP	5.7	□□□□□ -1.5
YDC1	YPL087W	NDC80	P40460	691 aa		5.7	□□□□□ -1.5
YDC1	YPL087W	SPO1	P53541	631 aa		5.7	□□□□□ -1.5
YDC1	YPL087W	TMN2	Q04562	672 aa		5.7	□□□□□ -1.5
YDC1	YPL087W	VPS36	Q06696	566 aa		5.7	□□□□□ -1.5
YDC1	YPL087W	CHS5	Q12114	671 aa	Known RBP	5.7	□□□□□ -1.5
YDC1	YPL087W	RPS21B	Q3E754	87 aa	Known RBP	5.7	□□□□□ -1.5
YDC1	YPL087W	KIN3	P22209	435 aa		5.69	□□□□□ -1.5
YDC1	YPL087W	SKY1	Q03656	742 aa		5.69	□□□□□ -1.5
YDC1	YPL087W	FEN2	P25621	512 aa	Known RBP	5.68	□□□□□ -1.5
YDC1	YPL087W	EUG1	P32474	517 aa		5.68	□□□□□ -1.5
YDC1	YPL087W	SEC6	P32844	805 aa		5.68	□□□□□ -1.5
YDC1	YPL087W	GLG1	P36143	616 aa		5.68	□□□□□ -1.5
YDC1	YPL087W	ENP1	P38333	483 aa	Known RBP	5.68	□□□□□ -1.5
YDC1	YPL087W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
YDC1	YPL087W	EMP65	P40085	556 aa		5.68	□□□□□ -1.5
YDC1	YPL087W	TAF4	P50105	388 aa		5.68	□□□□□ -1.5
YDC1	YPL087W	IRC10	Q08118	586 aa		5.68	□□□□□ -1.5
YDC1	YPL087W	YPR027C	Q12079	277 aa		5.68	□□□□□ -1.5
YDC1	YPL087W	GFA1	P14742	717 aa	Known RBP	5.67	□□□□□ -1.5
YDC1	YPL087W	YPT7	P32939	208 aa		5.67	□□□□□ -1.5
YDC1	YPL087W	MTH1	P35198	433 aa		5.67	□□□□□ -1.5
YDC1	YPL087W	COS111	P38308	924 aa		5.67	□□□□□ -1.5
YDC1	YPL087W	BDH2	P39713	417 aa		5.67	□□□□□ -1.5
YDC1	YPL087W	YIL077C	P40508	320 aa		5.67	□□□□□ -1.5
YDC1	YPL087W	IES1	P43579	692 aa		5.67	□□□□□ -1.5
YDC1	YPL087W	GND2	P53319	492 aa		5.67	□□□□□ -1.5
YDC1	YPL087W	YPS7	Q06325	596 aa		5.67	□□□□□ -1.5
YDC1	YPL087W	HAP1	P0CE41	1502 aa		5.66	□□□□□ -1.5
YDC1	YPL087W	GLN4	P13188	809 aa	Known RBP	5.66	□□□□□ -1.5
YDC1	YPL087W	THR1	P17423	357 aa	Known RBP	5.66	□□□□□ -1.5
YDC1	YPL087W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
YDC1	YPL087W	HCA4	P20448	770 aa	Known RBP	5.66	□□□□□ -1.5
YDC1	YPL087W	DGR2	P32330	852 aa		5.66	□□□□□ -1.5
YDC1	YPL087W	YBR071W	P38243	211 aa		5.66	□□□□□ -1.5
YDC1	YPL087W	YJL206C	P39529	758 aa		5.66	□□□□□ -1.5
YDC1	YPL087W	SPC105	P53148	917 aa		5.66	□□□□□ -1.5
YDC1	YPL087W	YFT2	Q06676	274 aa		5.66	□□□□□ -1.5
YDC1	YPL087W	USV1	Q12132	391 aa		5.66	□□□□□ -1.5
YDC1	YPL087W	TMA17	Q12513	150 aa		5.66	□□□□□ -1.5
YDC1	YPL087W	RPS21A	P0C0V8	87 aa	Known RBP	5.65	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms