RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W YDL176WQ12027 708 aa2.59□□□□□ -2
VPS16YPL045W TY2B-LR1P0C2J3 1770 aa2.59□□□□□ -2
VPS16YPL045W TY2B-FP0CX63 1770 aa2.59□□□□□ -2
VPS16YPL045W TY2B-GR2P0CX64 1770 aa2.59□□□□□ -2
VPS16YPL045W TY2B-CP25384 1770 aa2.59□□□□□ -2
VPS16YPL045W TY2B-DR2Q03494 1770 aa2.59□□□□□ -2
VPS16YPL045W TY1B-DR1Q03855 1755 aa2.59□□□□□ -2
VPS16YPL045W TY2B-DR3Q07791 1770 aaKnown RBP2.59□□□□□ -2
VPS16YPL045W TY2B-OR1Q12113 1770 aa2.59□□□□□ -2
VPS16YPL045W TY2B-DR1Q12472 1770 aa2.59□□□□□ -2
VPS16YPL045W TY2B-OR2Q12501 1770 aa2.59□□□□□ -2
VPS16YPL045W PYC1P11154 1178 aaKnown RBP2.58□□□□□ -2
VPS16YPL045W ADE2P21264 571 aaKnown RBP2.58□□□□□ -2
VPS16YPL045W RIT1P23796 513 aa2.58□□□□□ -2
VPS16YPL045W MTC7P32633 139 aa2.58□□□□□ -2
VPS16YPL045W YPT7P32939 208 aa2.58□□□□□ -2
VPS16YPL045W RMA1P36001 430 aaKnown RBP2.58□□□□□ -2
VPS16YPL045W UME6P39001 836 aa2.58□□□□□ -2
VPS16YPL045W TPA1P40032 644 aaKnown RBP2.58□□□□□ -2
VPS16YPL045W FAF1P40546 346 aaPredicted RBP2.58□□□□□ -2
VPS16YPL045W MND2P40577 368 aa2.58□□□□□ -2
VPS16YPL045W PRP31P49704 494 aaPredicted RBP2.58□□□□□ -2
VPS16YPL045W YBP2P53169 641 aa2.58□□□□□ -2
VPS16YPL045W ARG5,6Q01217 863 aa2.58□□□□□ -2
VPS16YPL045W ACS1Q01574 713 aa2.58□□□□□ -2
VPS16YPL045W SXM1Q04175 944 aaKnown RBP2.58□□□□□ -2
VPS16YPL045W SNO4Q04902 237 aa2.58□□□□□ -2
VPS16YPL045W YLR287CQ05881 355 aa2.58□□□□□ -2
VPS16YPL045W SPN1Q06505 410 aaPredicted RBP2.58□□□□□ -2
VPS16YPL045W AAD4Q07747 329 aa2.58□□□□□ -2
VPS16YPL045W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
VPS16YPL045W HSP33Q08914 237 aaKnown RBP2.58□□□□□ -2
VPS16YPL045W HSP32Q08992 237 aa2.58□□□□□ -2
VPS16YPL045W RVB2Q12464 471 aaKnown RBP2.58□□□□□ -2
VPS16YPL045W HSH49Q99181 213 aaPredicted RBP2.58□□□□□ -2
VPS16YPL045W BPT1P14772 1559 aa2.58□□□□□ -2
VPS16YPL045W YPK9Q12697 1472 aa2.58□□□□□ -2
VPS16YPL045W URA3P03962 267 aa2.58□□□□□ -2
VPS16YPL045W ARG1P22768 420 aa2.58□□□□□ -2
VPS16YPL045W PRE4P30657 266 aa2.58□□□□□ -2
VPS16YPL045W YKL050CP35736 922 aa2.58□□□□□ -2
VPS16YPL045W MRPL36P36531 177 aa2.58□□□□□ -2
VPS16YPL045W YNL195CP40168 261 aa2.58□□□□□ -2
VPS16YPL045W PXA1P41909 870 aa2.58□□□□□ -2
VPS16YPL045W SSY1Q03770 852 aa2.58□□□□□ -2
VPS16YPL045W VPS36Q06696 566 aa2.58□□□□□ -2
VPS16YPL045W CRD1Q07560 283 aa2.58□□□□□ -2
VPS16YPL045W RRG1Q12167 365 aaPredicted RBP2.58□□□□□ -2
VPS16YPL045W HOS1Q12214 470 aa2.58□□□□□ -2
VPS16YPL045W CHS2P14180 963 aa2.57□□□□□ -2
VPS16YPL045W PFK2P16862 959 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
VPS16YPL045W FUR1P18562 216 aaKnown RBP2.57□□□□□ -2
VPS16YPL045W PRP4P20053 465 aaKnown RBP2.57□□□□□ -2
VPS16YPL045W PGS1P25578 521 aa2.57□□□□□ -2
VPS16YPL045W STE14P32584 239 aa2.57□□□□□ -2
VPS16YPL045W ESL2P36168 1195 aa2.57□□□□□ -2
VPS16YPL045W MSS4P38994 779 aa2.57□□□□□ -2
VPS16YPL045W URM1P40554 99 aaPredicted RBP2.57□□□□□ -2
VPS16YPL045W LYS14P40971 790 aa2.57□□□□□ -2
VPS16YPL045W RMD8P43620 662 aa2.57□□□□□ -2
VPS16YPL045W PRY1P47032 299 aa2.57□□□□□ -2
VPS16YPL045W ARE2P53629 642 aaKnown RBP2.57□□□□□ -2
VPS16YPL045W ASI2P53895 289 aa2.57□□□□□ -2
VPS16YPL045W REC102Q02721 264 aa2.57□□□□□ -2
VPS16YPL045W HMO1Q03973 246 aaKnown RBP2.57□□□□□ -2
VPS16YPL045W YLR352WQ06479 807 aa2.57□□□□□ -2
VPS16YPL045W UPC2Q12151 913 aa2.57□□□□□ -2
VPS16YPL045W TY1B-BRQ12193 1756 aa2.57□□□□□ -2
VPS16YPL045W TY1B-GR3Q12316 1755 aa2.57□□□□□ -2
VPS16YPL045W TY1B-ORQ92393 1755 aa2.57□□□□□ -2
VPS16YPL045W TY1B-DR3Q99231 1755 aa2.57□□□□□ -2
VPS16YPL045W SCC2Q04002 1493 aa2.57□□□□□ -2
VPS16YPL045W CYC1P00044 109 aaPredicted RBP2.57□□□□□ -2
VPS16YPL045W TUB3P09734 445 aaKnown RBP2.57□□□□□ -2
VPS16YPL045W SED4P25365 1065 aa2.57□□□□□ -2
VPS16YPL045W RAD16P31244 790 aa2.57□□□□□ -2
VPS16YPL045W VMA8P32610 256 aaKnown RBP2.57□□□□□ -2
VPS16YPL045W NOP4P37838 685 aaKnown RBP2.57□□□□□ -2
VPS16YPL045W CDS1P38221 457 aa2.57□□□□□ -2
VPS16YPL045W YBR225WP38321 900 aa2.57□□□□□ -2
VPS16YPL045W SAF1P38352 637 aa2.57□□□□□ -2
VPS16YPL045W YHR112CP38716 378 aa2.57□□□□□ -2
VPS16YPL045W CCT3P39077 534 aaKnown RBP2.57□□□□□ -2
VPS16YPL045W PRM2P40534 656 aa2.57□□□□□ -2
VPS16YPL045W GPD2P41911 440 aaKnown RBP2.57□□□□□ -2
VPS16YPL045W POL31P46957 487 aa2.57□□□□□ -2
VPS16YPL045W IMA1P53051 589 aa2.57□□□□□ -2
VPS16YPL045W SQS1P53866 767 aaKnown RBP2.57□□□□□ -2
VPS16YPL045W VBA4Q04602 768 aaKnown RBP2.57□□□□□ -2
VPS16YPL045W PCD1Q12524 340 aa2.57□□□□□ -2
VPS16YPL045W TY2B-BQ12491 1770 aa2.56□□□□□ -2
VPS16YPL045W PCK1P10963 549 aa2.56□□□□□ -2
VPS16YPL045W TEF4P36008 412 aaKnown RBP2.56□□□□□ -2
VPS16YPL045W GSM1P42950 618 aa2.56□□□□□ -2
VPS16YPL045W SIP4P46954 829 aa2.56□□□□□ -2
VPS16YPL045W BIT61P47041 543 aa2.56□□□□□ -2
VPS16YPL045W TAH11P47112 604 aa2.56□□□□□ -2
VPS16YPL045W YDL183CP48569 320 aa2.56□□□□□ -2
VPS16YPL045W PSP1P50896 841 aaKnown RBP2.56□□□□□ -2
VPS16YPL045W MDR1P53258 950 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms