RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W YPL068CQ02749 293 aa4.48□□□□□ -1.69
UBP8YMR223W NTG2Q08214 380 aa4.48□□□□□ -1.69
UBP8YMR223W CIR2Q08822 631 aa4.48□□□□□ -1.69
UBP8YMR223W ZPS1Q12512 249 aa4.48□□□□□ -1.69
UBP8YMR223W IME1P21190 360 aa4.47□□□□□ -1.69
UBP8YMR223W RIM4P38741 713 aa4.47□□□□□ -1.69
UBP8YMR223W FDC1Q03034 503 aa4.47□□□□□ -1.69
UBP8YMR223W RCR2Q03446 210 aaKnown RBP4.47□□□□□ -1.69
UBP8YMR223W YLR407WQ06070 228 aa4.47□□□□□ -1.69
UBP8YMR223W GUD1Q07729 489 aa4.47□□□□□ -1.69
UBP8YMR223W YLR001CQ07895 862 aa4.47□□□□□ -1.69
UBP8YMR223W MET13P53128 600 aa4.46□□□□□ -1.69
UBP8YMR223W YDL073WQ07454 984 aa4.46□□□□□ -1.69
UBP8YMR223W YMR084WA2P2R3 262 aa4.46□□□□□ -1.7
UBP8YMR223W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
UBP8YMR223W BUD8P41698 603 aa4.46□□□□□ -1.7
UBP8YMR223W TRS23Q03784 219 aa4.46□□□□□ -1.7
UBP8YMR223W HLR1Q04429 423 aa4.46□□□□□ -1.7
UBP8YMR223W RPL7AP05737 244 aaKnown RBP4.45□□□□□ -1.7
UBP8YMR223W TUP1P16649 713 aa4.45□□□□□ -1.7
UBP8YMR223W BEM3P32873 1128 aa4.45□□□□□ -1.7
UBP8YMR223W APD1P38281 316 aa4.45□□□□□ -1.7
UBP8YMR223W GEP3Q08622 556 aa4.45□□□□□ -1.7
UBP8YMR223W RPL7BQ12213 244 aaKnown RBP4.45□□□□□ -1.7
UBP8YMR223W CPA2P03965 1118 aaKnown RBP4.44□□□□□ -1.7
UBP8YMR223W HEM1P09950 548 aaPredicted RBP4.44□□□□□ -1.7
UBP8YMR223W SWI6P09959 803 aa4.44□□□□□ -1.7
UBP8YMR223W RPC34P32910 317 aa4.44□□□□□ -1.7
UBP8YMR223W TMN3P40071 706 aa4.44□□□□□ -1.7
UBP8YMR223W NMD5P46970 1048 aa4.44□□□□□ -1.7
UBP8YMR223W COQ6P53318 479 aa4.44□□□□□ -1.7
UBP8YMR223W ATP23P53722 227 aa4.44□□□□□ -1.7
UBP8YMR223W YNL193WP53870 558 aa4.44□□□□□ -1.7
UBP8YMR223W YPS7Q06325 596 aa4.44□□□□□ -1.7
UBP8YMR223W WHI2P12611 486 aa4.43□□□□□ -1.7
UBP8YMR223W TSR4P25040 408 aa4.43□□□□□ -1.7
UBP8YMR223W CNE1P27825 502 aa4.43□□□□□ -1.7
UBP8YMR223W PPE1P38796 400 aa4.43□□□□□ -1.7
UBP8YMR223W MGS1P40151 587 aa4.43□□□□□ -1.7
UBP8YMR223W RET2P43621 546 aa4.43□□□□□ -1.7
UBP8YMR223W YIP4P53093 235 aa4.43□□□□□ -1.7
UBP8YMR223W YNL018CP53976 612 aa4.43□□□□□ -1.7
UBP8YMR223W EFR3Q03653 782 aaKnown RBP4.43□□□□□ -1.7
UBP8YMR223W PRE4P30657 266 aa4.42□□□□□ -1.7
UBP8YMR223W EUG1P32474 517 aa4.42□□□□□ -1.7
UBP8YMR223W NSE5Q03718 556 aa4.42□□□□□ -1.7
UBP8YMR223W MRPL9P31334 269 aa4.41□□□□□ -1.7
UBP8YMR223W ECM32P32644 1121 aaKnown RBP4.41□□□□□ -1.7
UBP8YMR223W DHR2P36009 735 aaPredicted RBP4.41□□□□□ -1.7
UBP8YMR223W MRPL7P36519 292 aa4.41□□□□□ -1.7
UBP8YMR223W SNO3P43544 222 aa4.41□□□□□ -1.7
UBP8YMR223W ERG13P54839 491 aaKnown RBP4.41□□□□□ -1.7
UBP8YMR223W MFM1Q02783 413 aa4.41□□□□□ -1.7
UBP8YMR223W TFB2Q02939 513 aa4.41□□□□□ -1.7
UBP8YMR223W GFD1Q04839 188 aaKnown RBP4.41□□□□□ -1.7
UBP8YMR223W STP4Q07351 490 aa4.41□□□□□ -1.7
UBP8YMR223W YPL216WQ08964 1102 aa4.41□□□□□ -1.7
UBP8YMR223W SPC97P38863 823 aa4.4□□□□□ -1.7
UBP8YMR223W YGR054WP53235 642 aaKnown RBP4.4□□□□□ -1.7
UBP8YMR223W TDA9Q04545 1251 aa4.4□□□□□ -1.7
UBP8YMR223W TGS1Q12052 315 aa4.4□□□□□ -1.7
UBP8YMR223W FRE7Q12333 620 aa4.4□□□□□ -1.7
UBP8YMR223W RPS17AP02407 136 aaKnown RBP4.39□□□□□ -1.71
UBP8YMR223W RPS17BP14127 136 aaKnown RBP4.39□□□□□ -1.71
UBP8YMR223W TDA3P38758 523 aa4.39□□□□□ -1.71
UBP8YMR223W IRC8P47046 822 aa4.39□□□□□ -1.71
UBP8YMR223W TAF4P50105 388 aa4.39□□□□□ -1.71
UBP8YMR223W BUD17P53727 317 aa4.39□□□□□ -1.71
UBP8YMR223W NOP15P53927 220 aaPredicted RBP4.39□□□□□ -1.71
UBP8YMR223W LOT5P34234 306 aa4.38□□□□□ -1.71
UBP8YMR223W CRG1P38892 291 aaRIP-Chip data4.38□□□□□ -1.71not detected
UBP8YMR223W CKB2P38930 258 aa4.38□□□□□ -1.71
UBP8YMR223W FTR1P40088 404 aa4.38□□□□□ -1.71
UBP8YMR223W AQY1P0CD91 305 aa4.38□□□□□ -1.71
UBP8YMR223W HOP1P20050 605 aa4.38□□□□□ -1.71
UBP8YMR223W CAP1P28495 268 aaKnown RBP4.38□□□□□ -1.71
UBP8YMR223W OPT1P40897 799 aa4.38□□□□□ -1.71
UBP8YMR223W MEP2P41948 499 aa4.38□□□□□ -1.71
UBP8YMR223W IES1P43579 692 aa4.38□□□□□ -1.71
UBP8YMR223W RPS15Q01855 142 aaKnown RBP4.38□□□□□ -1.71
UBP8YMR223W GSY2P27472 705 aa4.37□□□□□ -1.71
UBP8YMR223W DUN1P39009 513 aa4.37□□□□□ -1.71
UBP8YMR223W EXO1P39875 702 aa4.37□□□□□ -1.71
UBP8YMR223W YEL025CP39991 1188 aa4.37□□□□□ -1.71
UBP8YMR223W TOP1P04786 769 aa4.36□□□□□ -1.71
UBP8YMR223W RGT1P32862 1170 aa4.36□□□□□ -1.71
UBP8YMR223W BRN1P38170 754 aa4.36□□□□□ -1.71
UBP8YMR223W CDS1P38221 457 aa4.36□□□□□ -1.71
UBP8YMR223W PCI8P40512 444 aa4.36□□□□□ -1.71
UBP8YMR223W MNT3P40549 630 aa4.36□□□□□ -1.71
UBP8YMR223W BST1P43571 1029 aa4.36□□□□□ -1.71
UBP8YMR223W YJL043WP47053 257 aa4.36□□□□□ -1.71
UBP8YMR223W IDP3P53982 420 aaKnown RBP4.36□□□□□ -1.71
UBP8YMR223W RSC9Q03124 581 aa4.36□□□□□ -1.71
UBP8YMR223W BSP1Q06604 576 aa4.36□□□□□ -1.71
UBP8YMR223W AIM41Q12032 185 aa4.36□□□□□ -1.71
UBP8YMR223W PRM2P40534 656 aa4.35□□□□□ -1.71
UBP8YMR223W SDA1P53313 767 aaKnown RBP4.35□□□□□ -1.71
UBP8YMR223W TIM50Q02776 476 aa4.35□□□□□ -1.71
UBP8YMR223W CCL1P37366 393 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms