RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C PMT3P47190 753 aa3.82□□□□□ -1.8
UBX4YMR067C HLJ1P48353 224 aa3.82□□□□□ -1.8
UBX4YMR067C CPR8P53728 308 aa3.82□□□□□ -1.8
UBX4YMR067C STP4Q07351 490 aa3.82□□□□□ -1.8
UBX4YMR067C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
UBX4YMR067C PRE4P30657 266 aa3.81□□□□□ -1.8
UBX4YMR067C YMC1P32331 307 aa3.81□□□□□ -1.8
UBX4YMR067C ENP2P48234 707 aaKnown RBP3.81□□□□□ -1.8
UBX4YMR067C TAF4P50105 388 aa3.81□□□□□ -1.8
UBX4YMR067C HFD1Q04458 532 aa3.81□□□□□ -1.8
UBX4YMR067C THI73Q07904 523 aa3.81□□□□□ -1.8
UBX4YMR067C PGK1P00560 416 aaKnown RBP3.8□□□□□ -1.8
UBX4YMR067C STE4P18851 423 aa3.8□□□□□ -1.8
UBX4YMR067C SEC65P29478 273 aa3.8□□□□□ -1.8
UBX4YMR067C OAF3P36023 863 aa3.8□□□□□ -1.8
UBX4YMR067C DID4P36108 232 aa3.8□□□□□ -1.8
UBX4YMR067C FPR3P38911 411 aaKnown RBP3.8□□□□□ -1.8
UBX4YMR067C HXT6P39003 570 aaKnown RBP3.8□□□□□ -1.8
UBX4YMR067C HXT7P39004 570 aa3.8□□□□□ -1.8
UBX4YMR067C DUN1P39009 513 aa3.8□□□□□ -1.8
UBX4YMR067C BNA3P47039 444 aaKnown RBP3.8□□□□□ -1.8
UBX4YMR067C YGL117WP53133 265 aa3.8□□□□□ -1.8
UBX4YMR067C DNM1P54861 757 aa3.8□□□□□ -1.8
UBX4YMR067C ECM9Q02202 377 aa3.8□□□□□ -1.8
UBX4YMR067C MTQ2Q03920 221 aaPredicted RBP3.8□□□□□ -1.8
UBX4YMR067C YTM1Q12024 460 aaPredicted RBP3.8□□□□□ -1.8
UBX4YMR067C ICT1Q12385 394 aa3.8□□□□□ -1.8
UBX4YMR067C ERG11P10614 530 aa3.79□□□□□ -1.8
UBX4YMR067C ACO1P19414 778 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
UBX4YMR067C TMT1P32643 299 aa3.79□□□□□ -1.8
UBX4YMR067C TYS1P36421 394 aaKnown RBP3.79□□□□□ -1.8
UBX4YMR067C PIH1P38768 344 aa3.79□□□□□ -1.8
UBX4YMR067C MNN11P46985 422 aaKnown RBP3.79□□□□□ -1.8
UBX4YMR067C PTA1Q01329 785 aaPredicted RBP3.79□□□□□ -1.8
UBX4YMR067C ARG7Q04728 441 aa3.79□□□□□ -1.8
UBX4YMR067C HFI1Q12060 488 aa3.79□□□□□ -1.8
UBX4YMR067C NUP145P49687 1317 aa3.78□□□□□ -1.8
UBX4YMR067C DHR2P36009 735 aaPredicted RBP3.78□□□□□ -1.8
UBX4YMR067C MRPL7P36519 292 aa3.78□□□□□ -1.8
UBX4YMR067C RIM4P38741 713 aa3.78□□□□□ -1.8
UBX4YMR067C CRG1P38892 291 aaRIP-Chip data3.78□□□□□ -1.8not detected
UBX4YMR067C TMN3P40071 706 aa3.78□□□□□ -1.8
UBX4YMR067C FTR1P40088 404 aa3.78□□□□□ -1.8
UBX4YMR067C PRM2P40534 656 aa3.78□□□□□ -1.8
UBX4YMR067C SEC5P89102 971 aa3.78□□□□□ -1.8
UBX4YMR067C UME1Q03010 460 aa3.78□□□□□ -1.8
UBX4YMR067C EFR3Q03653 782 aaKnown RBP3.78□□□□□ -1.8
UBX4YMR067C YHM2Q04013 314 aa3.78□□□□□ -1.8
UBX4YMR067C IRC3Q06683 689 aa3.78□□□□□ -1.8
UBX4YMR067C YDL073WQ07454 984 aa3.78□□□□□ -1.8
UBX4YMR067C ZPS1Q12512 249 aa3.78□□□□□ -1.8
UBX4YMR067C RPS21BQ3E754 87 aaKnown RBP3.78□□□□□ -1.8
UBX4YMR067C LEU2P04173 364 aaPredicted RBP3.77□□□□□ -1.81
UBX4YMR067C MBR1P23493 339 aa3.77□□□□□ -1.81
UBX4YMR067C MF(ALPHA)2P32435 120 aa3.77□□□□□ -1.81
UBX4YMR067C HOT13P36078 116 aa3.77□□□□□ -1.81
UBX4YMR067C PPE1P38796 400 aa3.77□□□□□ -1.81
UBX4YMR067C OAF1P39720 1047 aaPredicted RBP3.77□□□□□ -1.81
UBX4YMR067C GLO1P50107 326 aa3.77□□□□□ -1.81
UBX4YMR067C YIP4P53093 235 aa3.77□□□□□ -1.81
UBX4YMR067C YGR054WP53235 642 aaKnown RBP3.77□□□□□ -1.81
UBX4YMR067C TRS23Q03784 219 aa3.77□□□□□ -1.81
UBX4YMR067C YPL216WQ08964 1102 aa3.77□□□□□ -1.81
UBX4YMR067C AIM41Q12032 185 aa3.77□□□□□ -1.81
UBX4YMR067C TUF1P02992 437 aaKnown RBP3.76□□□□□ -1.81
UBX4YMR067C GLN4P13188 809 aaKnown RBP3.76□□□□□ -1.81
UBX4YMR067C TUP1P16649 713 aa3.76□□□□□ -1.81
UBX4YMR067C PMA2P19657 947 aa3.76□□□□□ -1.81
UBX4YMR067C HOP1P20050 605 aa3.76□□□□□ -1.81
UBX4YMR067C PTP1P25044 335 aa3.76□□□□□ -1.81
UBX4YMR067C AAD3P25612 363 aa3.76□□□□□ -1.81
UBX4YMR067C LOT5P34234 306 aa3.76□□□□□ -1.81
UBX4YMR067C YEL025CP39991 1188 aa3.76□□□□□ -1.81
UBX4YMR067C TAX4P47030 604 aa3.76□□□□□ -1.81
UBX4YMR067C YNR029CP53729 429 aaKnown RBP3.76□□□□□ -1.81
UBX4YMR067C MFM1Q02783 413 aa3.76□□□□□ -1.81
UBX4YMR067C YAP7Q08182 245 aa3.76□□□□□ -1.81
UBX4YMR067C YGR161W-CQ3E744 92 aa3.76□□□□□ -1.81
UBX4YMR067C YMR084WA2P2R3 262 aa3.75□□□□□ -1.81
UBX4YMR067C CPA2P03965 1118 aaKnown RBP3.75□□□□□ -1.81
UBX4YMR067C RPL7AP05737 244 aaKnown RBP3.75□□□□□ -1.81
UBX4YMR067C APN1P22936 367 aa3.75□□□□□ -1.81
UBX4YMR067C CNE1P27825 502 aa3.75□□□□□ -1.81
UBX4YMR067C CAP1P28495 268 aaKnown RBP3.75□□□□□ -1.81
UBX4YMR067C CDS1P38221 457 aa3.75□□□□□ -1.81
UBX4YMR067C VID28P40547 921 aa3.75□□□□□ -1.81
UBX4YMR067C NET1P47035 1189 aa3.75□□□□□ -1.81
UBX4YMR067C YJR142WP47173 342 aa3.75□□□□□ -1.81
UBX4YMR067C BUD17P53727 317 aa3.75□□□□□ -1.81
UBX4YMR067C RPS15Q01855 142 aaKnown RBP3.75□□□□□ -1.81
UBX4YMR067C TIM50Q02776 476 aa3.75□□□□□ -1.81
UBX4YMR067C YCG1Q06680 1035 aa3.75□□□□□ -1.81
UBX4YMR067C TGS1Q12052 315 aa3.75□□□□□ -1.81
UBX4YMR067C RPL7BQ12213 244 aaKnown RBP3.75□□□□□ -1.81
UBX4YMR067C AI5_ALPHAQ9ZZX1 630 aa3.75□□□□□ -1.81
UBX4YMR067C WHI2P12611 486 aa3.74□□□□□ -1.81
UBX4YMR067C CDC26P14724 124 aa3.74□□□□□ -1.81
UBX4YMR067C NUP1P20676 1076 aa3.74□□□□□ -1.81
UBX4YMR067C MTC7P32633 139 aa3.74□□□□□ -1.81
UBX4YMR067C YHR033WP38690 423 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms