RNA–Protein interactions for RNA: YJL033W

HCA4, Transcript of DEAD box RNA helicase, yeastyeast

Gene HCA4, Length 2,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCA4YJL033W YHR112CP38716 378 aa4.33□□□□□ -1.72
HCA4YJL033W CKB2P38930 258 aa4.33□□□□□ -1.72
HCA4YJL033W YJL163CP46996 555 aa4.33□□□□□ -1.72
HCA4YJL033W ARP4P80428 489 aa4.33□□□□□ -1.72
HCA4YJL033W REC102Q02721 264 aa4.33□□□□□ -1.72
HCA4YJL033W SRP54P20424 541 aaKnown RBP4.33□□□□□ -1.72
HCA4YJL033W BAP3P41815 604 aa4.33□□□□□ -1.72
HCA4YJL033W SLI1P53304 468 aa4.33□□□□□ -1.72
HCA4YJL033W SPO1P53541 631 aa4.33□□□□□ -1.72
HCA4YJL033W GPD1Q00055 391 aaKnown RBP4.33□□□□□ -1.72
HCA4YJL033W CTK1Q03957 528 aaKnown RBP4.33□□□□□ -1.72
HCA4YJL033W SFI1Q12369 946 aa4.33□□□□□ -1.72
HCA4YJL033W MAL31P38156 614 aa4.32□□□□□ -1.72
HCA4YJL033W SSZ1P38788 538 aaKnown RBP4.32□□□□□ -1.72
HCA4YJL033W GID8P40208 455 aa4.32□□□□□ -1.72
HCA4YJL033W DAS1P47005 663 aa4.32□□□□□ -1.72
HCA4YJL033W TAN1P53072 289 aaPredicted RBP4.32□□□□□ -1.72
HCA4YJL033W DSD1P53095 428 aa4.32□□□□□ -1.72
HCA4YJL033W OMS1Q06668 471 aa4.32□□□□□ -1.72
HCA4YJL033W AKL1P38080 1108 aaKnown RBP4.32□□□□□ -1.72
HCA4YJL033W HOS4P40480 1083 aa4.32□□□□□ -1.72
HCA4YJL033W SET2P46995 733 aaKnown RBP4.32□□□□□ -1.72
HCA4YJL033W YJR039WP47107 1121 aa4.32□□□□□ -1.72
HCA4YJL033W ZDS2P54786 942 aa4.32□□□□□ -1.72
HCA4YJL033W MAK10Q02197 733 aa4.32□□□□□ -1.72
HCA4YJL033W ACF2Q12168 779 aa4.32□□□□□ -1.72
HCA4YJL033W HSP104P31539 908 aaKnown RBP4.31□□□□□ -1.72
HCA4YJL033W MIC60P36112 540 aa4.31□□□□□ -1.72
HCA4YJL033W APN2P38207 520 aa4.31□□□□□ -1.72
HCA4YJL033W RET2P43621 546 aa4.31□□□□□ -1.72
HCA4YJL033W YJR096WP47137 282 aa4.31□□□□□ -1.72
HCA4YJL033W BRE5P53741 515 aaKnown RBP4.31□□□□□ -1.72
HCA4YJL033W UME1Q03010 460 aa4.31□□□□□ -1.72
HCA4YJL033W YMR102CQ03177 834 aa4.31□□□□□ -1.72
HCA4YJL033W CSI1Q04368 295 aa4.31□□□□□ -1.72
HCA4YJL033W NUP145P49687 1317 aa4.31□□□□□ -1.72
HCA4YJL033W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
HCA4YJL033W PRP19P32523 503 aaKnown RBP4.3□□□□□ -1.72
HCA4YJL033W PPS1P38148 807 aa4.3□□□□□ -1.72
HCA4YJL033W RFC1P38630 861 aaKnown RBP4.3□□□□□ -1.72
HCA4YJL033W TIM44Q01852 431 aa4.3□□□□□ -1.72
HCA4YJL033W IRC13Q08630 104 aa4.3□□□□□ -1.72
HCA4YJL033W DCS2Q12123 353 aa4.3□□□□□ -1.72
HCA4YJL033W CBF5P33322 483 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
HCA4YJL033W OAR1P35731 278 aa4.3□□□□□ -1.72
HCA4YJL033W TDA3P38758 523 aa4.3□□□□□ -1.72
HCA4YJL033W BCD1P38772 366 aa4.3□□□□□ -1.72
HCA4YJL033W BFA1P47113 574 aa4.3□□□□□ -1.72
HCA4YJL033W UBC11P52492 156 aa4.3□□□□□ -1.72
HCA4YJL033W LEE1Q02799 301 aaKnown RBP4.3□□□□□ -1.72
HCA4YJL033W HMO1Q03973 246 aaKnown RBP4.3□□□□□ -1.72
HCA4YJL033W YOL087CQ99247 1116 aa4.3□□□□□ -1.72
HCA4YJL033W RAD51P25454 400 aa4.29□□□□□ -1.72
HCA4YJL033W HIS7P33734 552 aaKnown RBP4.29□□□□□ -1.72
HCA4YJL033W REV7P38927 245 aa4.29□□□□□ -1.72
HCA4YJL033W CCT3P39077 534 aaKnown RBP4.29□□□□□ -1.72
HCA4YJL033W FMP52P40008 231 aa4.29□□□□□ -1.72
HCA4YJL033W STU2P46675 888 aa4.29□□□□□ -1.72
HCA4YJL033W YGR237CP50089 785 aa4.29□□□□□ -1.72
HCA4YJL033W YMR206WQ03695 313 aa4.29□□□□□ -1.72
HCA4YJL033W MTQ2Q03920 221 aaPredicted RBP4.29□□□□□ -1.72
HCA4YJL033W PSK1P31374 1356 aa4.29□□□□□ -1.72
HCA4YJL033W ROM2P51862 1356 aaKnown RBP4.29□□□□□ -1.72
HCA4YJL033W SWI3P32591 825 aa4.29□□□□□ -1.72
HCA4YJL033W SWH1P35845 1188 aa4.29□□□□□ -1.72
HCA4YJL033W YKR075CP36155 307 aa4.29□□□□□ -1.72
HCA4YJL033W MOH1P38191 138 aa4.29□□□□□ -1.72
HCA4YJL033W YHL017WP38745 532 aa4.29□□□□□ -1.72
HCA4YJL033W MTL1P53214 551 aa4.29□□□□□ -1.72
HCA4YJL033W MRS2Q01926 470 aa4.29□□□□□ -1.72
HCA4YJL033W TAP42Q04372 366 aa4.29□□□□□ -1.72
HCA4YJL033W SML1Q04964 104 aa4.29□□□□□ -1.72
HCA4YJL033W NKP2Q06162 153 aa4.29□□□□□ -1.72
HCA4YJL033W PYC1P11154 1178 aaKnown RBP4.28□□□□□ -1.72
HCA4YJL033W RNR1P21524 888 aaKnown RBP4.28□□□□□ -1.72
HCA4YJL033W RAD24P32641 659 aa4.28□□□□□ -1.72
HCA4YJL033W GDT1P38301 280 aaPredicted RBP4.28□□□□□ -1.72
HCA4YJL033W YNG2P38806 282 aaKnown RBP4.28□□□□□ -1.72
HCA4YJL033W RTT107P38850 1070 aa4.28□□□□□ -1.72
HCA4YJL033W YHR202WP38887 602 aa4.28□□□□□ -1.72
HCA4YJL033W VPS72Q03388 795 aa4.28□□□□□ -1.72
HCA4YJL033W HFD1Q04458 532 aa4.28□□□□□ -1.72
HCA4YJL033W MCH5Q08777 521 aa4.28□□□□□ -1.72
HCA4YJL033W HRP1Q99383 534 aaKnown RBP4.28□□□□□ -1.72
HCA4YJL033W RPN12P32496 274 aa4.28□□□□□ -1.72
HCA4YJL033W MFT1P33441 392 aaKnown RBP4.28□□□□□ -1.72
HCA4YJL033W NUP60P39705 539 aa4.28□□□□□ -1.72
HCA4YJL033W GZF3P42944 551 aaKnown RBP4.28□□□□□ -1.72
HCA4YJL033W SGO1Q08490 590 aa4.28□□□□□ -1.72
HCA4YJL033W DIA2Q08496 732 aaPredicted RBP4.28□□□□□ -1.72
HCA4YJL033W LYS9P38999 446 aa4.27□□□□□ -1.73
HCA4YJL033W CCT5P40413 562 aaKnown RBP4.27□□□□□ -1.73
HCA4YJL033W CIR1P42940 261 aa4.27□□□□□ -1.73
HCA4YJL033W YGR153WP48238 217 aa4.27□□□□□ -1.73
HCA4YJL033W STB4P50104 949 aa4.27□□□□□ -1.73
HCA4YJL033W COX18P53239 316 aa4.27□□□□□ -1.73
HCA4YJL033W YSH1Q06224 779 aaPredicted RBP4.27□□□□□ -1.73
HCA4YJL033W YTM1Q12024 460 aaPredicted RBP4.27□□□□□ -1.73
HCA4YJL033W FAP7Q12055 197 aaPredicted RBP4.27□□□□□ -1.73
HCA4YJL033W HAP1P0CE41 1502 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 66 ms