RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W AEP2P22136 580 aa7.1□□□□□ -1.27
NUP49YGL172W DBF4P32325 704 aa7.1□□□□□ -1.27
NUP49YGL172W SRB2P34162 210 aa7.1□□□□□ -1.27
NUP49YGL172W SEG2P34250 1132 aa7.1□□□□□ -1.27
NUP49YGL172W OCA5P38738 679 aa7.1□□□□□ -1.27
NUP49YGL172W SPC72P39723 622 aa7.1□□□□□ -1.27
NUP49YGL172W TMN3P40071 706 aa7.1□□□□□ -1.27
NUP49YGL172W CDC1P40986 491 aa7.1□□□□□ -1.27
NUP49YGL172W HER2Q03557 464 aa7.1□□□□□ -1.27
NUP49YGL172W ESC2Q06340 456 aa7.1□□□□□ -1.27
NUP49YGL172W VAC14Q06708 880 aa7.1□□□□□ -1.27
NUP49YGL172W AIM39Q08223 395 aa7.1□□□□□ -1.27
NUP49YGL172W RPP1BP10622 106 aaKnown RBP7.09□□□□□ -1.28
NUP49YGL172W EST1P17214 699 aaPredicted RBP7.09□□□□□ -1.28
NUP49YGL172W SEC1P30619 724 aaKnown RBP7.09□□□□□ -1.28
NUP49YGL172W ABD1P32783 436 aaPredicted RBP7.09□□□□□ -1.28
NUP49YGL172W RRT2P38332 387 aa7.09□□□□□ -1.28
NUP49YGL172W PEX28P38848 579 aa7.09□□□□□ -1.28
NUP49YGL172W AVT2P39981 480 aa7.09□□□□□ -1.28
NUP49YGL172W ASG1P40467 964 aa7.09□□□□□ -1.28
NUP49YGL172W BRO1P48582 844 aa7.09□□□□□ -1.28
NUP49YGL172W BTN2P53286 410 aa7.09□□□□□ -1.28
NUP49YGL172W BOP3P53958 396 aa7.09□□□□□ -1.28
NUP49YGL172W MTD1Q02046 320 aaKnown RBP7.09□□□□□ -1.28
NUP49YGL172W NGL3Q03210 505 aa7.09□□□□□ -1.28
NUP49YGL172W YMR114CQ04471 368 aaKnown RBP7.09□□□□□ -1.28
NUP49YGL172W ERV41Q04651 352 aa7.09□□□□□ -1.28
NUP49YGL172W YDR278CQ05612 105 aa7.09□□□□□ -1.28
NUP49YGL172W YRR1Q12172 810 aa7.09□□□□□ -1.28
NUP49YGL172W GFA1P14742 717 aaKnown RBP7.08□□□□□ -1.28
NUP49YGL172W PUT4P15380 627 aa7.08□□□□□ -1.28
NUP49YGL172W TSA1P34760 196 aaKnown RBP7.08□□□□□ -1.28
NUP49YGL172W HSL7P38274 827 aa7.08□□□□□ -1.28
NUP49YGL172W ERP5P38819 212 aa7.08□□□□□ -1.28
NUP49YGL172W FHL1P39521 936 aa7.08□□□□□ -1.28
NUP49YGL172W YER189WP40104 122 aa7.08□□□□□ -1.28
NUP49YGL172W OYE3P41816 400 aaPredicted RBP7.08□□□□□ -1.28
NUP49YGL172W BFA1P47113 574 aa7.08□□□□□ -1.28
NUP49YGL172W CEG1Q01159 459 aaPredicted RBP7.08□□□□□ -1.28
NUP49YGL172W YPL062WQ02781 134 aa7.08□□□□□ -1.28
NUP49YGL172W ELP3Q02908 557 aaKnown RBP7.08□□□□□ -1.28
NUP49YGL172W GCN5Q03330 439 aa7.08□□□□□ -1.28
NUP49YGL172W ATG16Q03818 150 aa7.08□□□□□ -1.28
NUP49YGL172W SXM1Q04175 944 aaKnown RBP7.08□□□□□ -1.28
NUP49YGL172W SML1Q04964 104 aa7.08□□□□□ -1.28
NUP49YGL172W HRD3Q05787 833 aa7.08□□□□□ -1.28
NUP49YGL172W THI20Q08224 551 aa7.08□□□□□ -1.28
NUP49YGL172W VPS5Q92331 675 aa7.08□□□□□ -1.28
NUP49YGL172W AI4P03878 556 aa7.07□□□□□ -1.28
NUP49YGL172W ADE3P07245 946 aaKnown RBP7.07□□□□□ -1.28
NUP49YGL172W TRX1P22217 103 aaKnown RBP7.07□□□□□ -1.28
NUP49YGL172W DAL1P32375 460 aa7.07□□□□□ -1.28
NUP49YGL172W SEC61P32915 480 aa7.07□□□□□ -1.28
NUP49YGL172W YKR051WP36142 418 aa7.07□□□□□ -1.28
NUP49YGL172W YBR053CP38235 358 aa7.07□□□□□ -1.28
NUP49YGL172W RCK2P38623 610 aa7.07□□□□□ -1.28
NUP49YGL172W RIM4P38741 713 aa7.07□□□□□ -1.28
NUP49YGL172W LCP5P40079 357 aaPredicted RBP7.07□□□□□ -1.28
NUP49YGL172W MOB1P40484 314 aa7.07□□□□□ -1.28
NUP49YGL172W PRK1P40494 810 aa7.07□□□□□ -1.28
NUP49YGL172W UTP8P53276 713 aaKnown RBP7.07□□□□□ -1.28
NUP49YGL172W NOG2P53742 486 aaKnown RBP7.07□□□□□ -1.28
NUP49YGL172W IVY1Q04934 453 aa7.07□□□□□ -1.28
NUP49YGL172W ECM22Q05958 814 aaPredicted RBP7.07□□□□□ -1.28
NUP49YGL172W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
NUP49YGL172W FMP25Q08023 583 aa7.07□□□□□ -1.28
NUP49YGL172W APC5Q08683 685 aa7.07□□□□□ -1.28
NUP49YGL172W MCM16Q12262 181 aa7.07□□□□□ -1.28
NUP49YGL172W YLR462WO13556 202 aa7.06□□□□□ -1.28
NUP49YGL172W PAB1P04147 577 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
NUP49YGL172W HMG2P12684 1045 aa7.06□□□□□ -1.28
NUP49YGL172W APE1P14904 514 aa7.06□□□□□ -1.28
NUP49YGL172W RAD16P31244 790 aa7.06□□□□□ -1.28
NUP49YGL172W DSS4P32601 143 aa7.06□□□□□ -1.28
NUP49YGL172W YBR225WP38321 900 aa7.06□□□□□ -1.28
NUP49YGL172W SWC5P38326 303 aa7.06□□□□□ -1.28
NUP49YGL172W YHL049CP38722 271 aa7.06□□□□□ -1.28
NUP49YGL172W KHA1P40309 873 aa7.06□□□□□ -1.28
NUP49YGL172W BTT1P40314 149 aaPredicted RBP7.06□□□□□ -1.28
NUP49YGL172W NDC80P40460 691 aa7.06□□□□□ -1.28
NUP49YGL172W YIL054WP40524 105 aa7.06□□□□□ -1.28
NUP49YGL172W SAP185P40856 1058 aa7.06□□□□□ -1.28
NUP49YGL172W YFL064CP43540 174 aa7.06□□□□□ -1.28
NUP49YGL172W YGR283CP53336 341 aaPredicted RBP7.06□□□□□ -1.28
NUP49YGL172W RKM2Q03942 479 aa7.06□□□□□ -1.28
NUP49YGL172W SPG3Q04398 127 aaPredicted RBP7.06□□□□□ -1.28
NUP49YGL172W UFO1Q04511 668 aa7.06□□□□□ -1.28
NUP49YGL172W TFB4Q12004 338 aa7.06□□□□□ -1.28
NUP49YGL172W NDJ1Q12366 352 aa7.06□□□□□ -1.28
NUP49YGL172W ARP7Q12406 477 aa7.06□□□□□ -1.28
NUP49YGL172W YBL111CQ3E7Y5 667 aa7.06□□□□□ -1.28
NUP49YGL172W PEX34P25584 144 aa7.05□□□□□ -1.28
NUP49YGL172W PAP1P29468 568 aaKnown RBP7.05□□□□□ -1.28
NUP49YGL172W YBL055CP34220 418 aaPredicted RBP7.05□□□□□ -1.28
NUP49YGL172W SAF1P38352 637 aa7.05□□□□□ -1.28
NUP49YGL172W SFB3P38810 929 aa7.05□□□□□ -1.28
NUP49YGL172W YHR131CP38835 850 aa7.05□□□□□ -1.28
NUP49YGL172W NMD3P38861 518 aaKnown RBP7.05□□□□□ -1.28
NUP49YGL172W SMF1P38925 575 aa7.05□□□□□ -1.28
NUP49YGL172W PMC1P38929 1173 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 119.4 ms