RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	MGM1	P32266	881 aa		4.35	□□□□□ -1.71
SLX8	YER116C	PUP2	P32379	260 aa		4.35	□□□□□ -1.71
SLX8	YER116C	CDC12	P32468	407 aa	Known RBP	4.35	□□□□□ -1.71
SLX8	YER116C	STE13	P33894	931 aa		4.35	□□□□□ -1.71
SLX8	YER116C	TGL1	P34163	548 aa		4.35	□□□□□ -1.71
SLX8	YER116C	GCS1	P35197	352 aa		4.35	□□□□□ -1.71
SLX8	YER116C	TEF4	P36008	412 aa	Known RBP	4.35	□□□□□ -1.71
SLX8	YER116C	SET3	P36124	751 aa		4.35	□□□□□ -1.71
SLX8	YER116C	APE3	P37302	537 aa	Known RBP	4.35	□□□□□ -1.71
SLX8	YER116C	YBR138C	P38277	524 aa		4.35	□□□□□ -1.71
SLX8	YER116C	GND1	P38720	489 aa	Known RBP	4.35	□□□□□ -1.71
SLX8	YER116C	YHR131C	P38835	850 aa		4.35	□□□□□ -1.71
SLX8	YER116C	SWD1	P39706	426 aa		4.35	□□□□□ -1.71
SLX8	YER116C	STL1	P39932	569 aa		4.35	□□□□□ -1.71
SLX8	YER116C	YIL161W	P40449	235 aa	Known RBP	4.35	□□□□□ -1.71
SLX8	YER116C	SPO22	P40511	975 aa		4.35	□□□□□ -1.71
SLX8	YER116C	CCT7	P42943	550 aa	Known RBP	4.35	□□□□□ -1.71
SLX8	YER116C	AGX1	P43567	385 aa		4.35	□□□□□ -1.71
SLX8	YER116C	DUO1	P53168	247 aa	Known RBP	4.35	□□□□□ -1.71
SLX8	YER116C	OGG1	P53397	376 aa	Predicted RBP	4.35	□□□□□ -1.71
SLX8	YER116C	RIA1	P53893	1110 aa		4.35	□□□□□ -1.71
SLX8	YER116C	OAZ1	Q02803	292 aa		4.35	□□□□□ -1.71
SLX8	YER116C	RSF1	Q05043	376 aa		4.35	□□□□□ -1.71
SLX8	YER116C	YSH1	Q06224	779 aa	Predicted RBP	4.35	□□□□□ -1.71
SLX8	YER116C	TFC6	Q06339	672 aa		4.35	□□□□□ -1.71
SLX8	YER116C	NGL1	Q08213	363 aa	Known RBP	4.35	□□□□□ -1.71
SLX8	YER116C	GLO4	Q12320	285 aa		4.35	□□□□□ -1.71
SLX8	YER116C	LAT1	P12695	482 aa	Known RBP	4.34	□□□□□ -1.71
SLX8	YER116C	OM45	P16547	393 aa		4.34	□□□□□ -1.71
SLX8	YER116C	BET2	P20133	325 aa		4.34	□□□□□ -1.71
SLX8	YER116C	ADK2	P26364	225 aa		4.34	□□□□□ -1.71
SLX8	YER116C	CYS3	P31373	394 aa	Known RBP	4.34	□□□□□ -1.71
SLX8	YER116C	SSE1	P32589	693 aa	Known RBP	4.34	□□□□□ -1.71
SLX8	YER116C	MDL2	P33311	773 aa		4.34	□□□□□ -1.71
SLX8	YER116C	LOT5	P34234	306 aa		4.34	□□□□□ -1.71
SLX8	YER116C	UIP5	P36137	443 aa		4.34	□□□□□ -1.71
SLX8	YER116C	TAT1	P38085	619 aa		4.34	□□□□□ -1.71
SLX8	YER116C	PNT1	P38969	423 aa		4.34	□□□□□ -1.71
SLX8	YER116C	PIK1	P39104	1066 aa		4.34	□□□□□ -1.71
SLX8	YER116C	SEC9	P40357	651 aa		4.34	□□□□□ -1.71
SLX8	YER116C	PPT1	P53043	513 aa		4.34	□□□□□ -1.71
SLX8	YER116C	PIL1	P53252	339 aa	Known RBP	4.34	□□□□□ -1.71
SLX8	YER116C	YNR040W	P53736	256 aa		4.34	□□□□□ -1.71
SLX8	YER116C	BSC5	P53755	489 aa		4.34	□□□□□ -1.71
SLX8	YER116C	EOS1	P53938	366 aa		4.34	□□□□□ -1.71
SLX8	YER116C	SFB2	P53953	876 aa		4.34	□□□□□ -1.71
SLX8	YER116C	ERV25	P54837	211 aa	Known RBP	4.34	□□□□□ -1.71
SLX8	YER116C	TAP42	Q04372	366 aa		4.34	□□□□□ -1.71
SLX8	YER116C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
SLX8	YER116C	CLP1	Q08685	445 aa	Predicted RBP	4.34	□□□□□ -1.71
SLX8	YER116C	HUA2	Q12134	243 aa		4.34	□□□□□ -1.71
SLX8	YER116C	SKM1	Q12469	655 aa		4.34	□□□□□ -1.71
SLX8	YER116C	PTC5	Q12511	572 aa		4.34	□□□□□ -1.71
SLX8	YER116C	PCD1	Q12524	340 aa		4.34	□□□□□ -1.71
SLX8	YER116C	TPK1	P06244	397 aa		4.33	□□□□□ -1.72
SLX8	YER116C	FUS1	P11710	512 aa		4.33	□□□□□ -1.72
SLX8	YER116C	RNA1	P11745	407 aa	Known RBP	4.33	□□□□□ -1.72
SLX8	YER116C	POL3	P15436	1097 aa		4.33	□□□□□ -1.72
SLX8	YER116C	MER1	P16523	270 aa		4.33	□□□□□ -1.72
SLX8	YER116C	PET123	P17558	318 aa		4.33	□□□□□ -1.72
SLX8	YER116C	PRP28	P23394	588 aa		4.33	□□□□□ -1.72
SLX8	YER116C	DBP2	P24783	546 aa	Known RBP	4.33	□□□□□ -1.72
SLX8	YER116C	GRR1	P24814	1151 aa		4.33	□□□□□ -1.72
SLX8	YER116C	RSC6	P25632	483 aa		4.33	□□□□□ -1.72
SLX8	YER116C	MAC1	P35192	417 aa		4.33	□□□□□ -1.72
SLX8	YER116C	STB6	P36085	766 aa		4.33	□□□□□ -1.72
SLX8	YER116C	OTU2	P38747	307 aa	Known RBP	4.33	□□□□□ -1.72
SLX8	YER116C	UTP9	P38882	575 aa	Known RBP	4.33	□□□□□ -1.72
SLX8	YER116C	BUD16	P39988	312 aa		4.33	□□□□□ -1.72
SLX8	YER116C	OSW5	P40219	148 aa		4.33	□□□□□ -1.72
SLX8	YER116C	ATF1	P40353	525 aa		4.33	□□□□□ -1.72
SLX8	YER116C	VID28	P40547	921 aa		4.33	□□□□□ -1.72
SLX8	YER116C	ZIM17	P42844	174 aa		4.33	□□□□□ -1.72
SLX8	YER116C	AIP1	P46680	615 aa	Known RBP	4.33	□□□□□ -1.72
SLX8	YER116C	YJL181W	P46987	611 aa		4.33	□□□□□ -1.72
SLX8	YER116C	NOP9	P47077	666 aa	Known RBP	4.33	□□□□□ -1.72
SLX8	YER116C	PUS4	P48567	403 aa	Known RBP	4.33	□□□□□ -1.72
SLX8	YER116C	NNF2	P53253	936 aa		4.33	□□□□□ -1.72
SLX8	YER116C	YNR068C	P53754	272 aa		4.33	□□□□□ -1.72
SLX8	YER116C	VPS75	P53853	264 aa		4.33	□□□□□ -1.72
SLX8	YER116C	MTD1	Q02046	320 aa	Known RBP	4.33	□□□□□ -1.72
SLX8	YER116C	FDC1	Q03034	503 aa		4.33	□□□□□ -1.72
SLX8	YER116C	ERB1	Q04660	807 aa	Known RBP	4.33	□□□□□ -1.72
SLX8	YER116C	SPH1	Q06160	661 aa		4.33	□□□□□ -1.72
SLX8	YER116C	AVO1	Q08236	1176 aa		4.33	□□□□□ -1.72
SLX8	YER116C	BMS1	Q08965	1183 aa	Known RBP	4.33	□□□□□ -1.72
SLX8	YER116C	GET3	Q12154	354 aa	Known RBP	4.33	□□□□□ -1.72
SLX8	YER116C	MDY2	Q12285	212 aa		4.33	□□□□□ -1.72
SLX8	YER116C	ZRT2	Q12436	422 aa		4.33	□□□□□ -1.72
SLX8	YER116C	NOT3	P06102	836 aa	Known RBP	4.32	□□□□□ -1.72
SLX8	YER116C	HTS1	P07263	546 aa	Known RBP	4.32	□□□□□ -1.72
SLX8	YER116C	SEC53	P07283	254 aa	Known RBP	4.32	□□□□□ -1.72
SLX8	YER116C	VAS1	P07806	1104 aa	Known RBP	4.32	□□□□□ -1.72
SLX8	YER116C	RPL11A	P0C0W9	174 aa	Known RBP	4.32	□□□□□ -1.72
SLX8	YER116C	GLN4	P13188	809 aa	Known RBP	4.32	□□□□□ -1.72
SLX8	YER116C	APE1	P14904	514 aa		4.32	□□□□□ -1.72
SLX8	YER116C	SWI4	P25302	1093 aa	Known RBP	4.32	□□□□□ -1.72
SLX8	YER116C	PEP3	P27801	918 aa		4.32	□□□□□ -1.72
SLX8	YER116C	HXT4	P32467	576 aa		4.32	□□□□□ -1.72
SLX8	YER116C	SAC6	P32599	642 aa	Known RBP	4.32	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms