RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C GUF1P46943 645 aa11.32□□□□□ -0.6
SPC25YER018C CDC55Q00362 526 aa11.32□□□□□ -0.6
SPC25YER018C MTG1Q03151 367 aaPredicted RBP11.32□□□□□ -0.6
SPC25YER018C YMR187CQ03236 431 aa11.32□□□□□ -0.6
SPC25YER018C SPO71Q03868 1245 aa11.32□□□□□ -0.6
SPC25YER018C TDA9Q04545 1251 aa11.32□□□□□ -0.6
SPC25YER018C IDI1P15496 288 aa11.31□□□□□ -0.6
SPC25YER018C PCA1P38360 1216 aa11.31□□□□□ -0.6
SPC25YER018C LYS9P38999 446 aa11.31□□□□□ -0.6
SPC25YER018C ATG36P46983 293 aa11.31□□□□□ -0.6
SPC25YER018C YNL108CP53929 270 aa11.31□□□□□ -0.6
SPC25YER018C MTD1Q02046 320 aaKnown RBP11.31□□□□□ -0.6
SPC25YER018C EAR1Q03212 550 aa11.31□□□□□ -0.6
SPC25YER018C KAP95Q06142 861 aaKnown RBP11.31□□□□□ -0.6
SPC25YER018C THI21Q08975 551 aa11.31□□□□□ -0.6
SPC25YER018C MNL2Q12205 849 aa11.31□□□□□ -0.6
SPC25YER018C CDC8P00572 216 aa11.3□□□□□ -0.6
SPC25YER018C SFL1P20134 766 aa11.3□□□□□ -0.6
SPC25YER018C MET4P32389 672 aa11.3□□□□□ -0.6
SPC25YER018C UBC6P33296 250 aaPredicted RBP11.3□□□□□ -0.6
SPC25YER018C PBP2P38151 413 aaKnown RBP RIP-Chip data11.3□□□□□ -0.6not detected
SPC25YER018C VPS25P47142 202 aa11.3□□□□□ -0.6
SPC25YER018C YNL247WP53852 767 aaKnown RBP11.3□□□□□ -0.6
SPC25YER018C UTP6Q02354 440 aaKnown RBP11.3□□□□□ -0.6
SPC25YER018C INA17Q02888 182 aa11.3□□□□□ -0.6
SPC25YER018C THI7Q05998 598 aa11.3□□□□□ -0.6
SPC25YER018C YLR257WQ06146 321 aaKnown RBP11.3□□□□□ -0.6
SPC25YER018C FMP25Q08023 583 aa11.3□□□□□ -0.6
SPC25YER018C NUR1Q12066 484 aa11.3□□□□□ -0.6
SPC25YER018C YPK1P12688 680 aaKnown RBP11.29□□□□□ -0.6
SPC25YER018C URK1P27515 501 aa11.29□□□□□ -0.6
SPC25YER018C MEI4P29467 408 aa11.29□□□□□ -0.6
SPC25YER018C GCD6P32501 712 aaKnown RBP11.29□□□□□ -0.6
SPC25YER018C PEP7P32609 515 aa11.29□□□□□ -0.6
SPC25YER018C ECM2P38241 364 aaKnown RBP11.29□□□□□ -0.6
SPC25YER018C NMD3P38861 518 aaKnown RBP11.29□□□□□ -0.6
SPC25YER018C YMR134WP40207 237 aa11.29□□□□□ -0.6
SPC25YER018C MKT1P40850 830 aaKnown RBP11.29□□□□□ -0.6
SPC25YER018C MAF1P41910 395 aa11.29□□□□□ -0.6
SPC25YER018C BET4Q00618 327 aa11.29□□□□□ -0.6
SPC25YER018C YPL062WQ02781 134 aa11.29□□□□□ -0.6
SPC25YER018C HRD3Q05787 833 aa11.29□□□□□ -0.6
SPC25YER018C NOP6Q07623 225 aaKnown RBP11.29□□□□□ -0.6
SPC25YER018C CIR2Q08822 631 aa11.29□□□□□ -0.6
SPC25YER018C PAB1P04147 577 aaKnown RBP RIP-Chip data11.28□□□□□ -0.6 RIP-Chip
SPC25YER018C RAD10P06838 210 aa11.28□□□□□ -0.6
SPC25YER018C SLY1P22213 666 aa11.28□□□□□ -0.6
SPC25YER018C PDE1P22434 369 aa11.28□□□□□ -0.6
SPC25YER018C MSG5P38590 489 aa11.28□□□□□ -0.6
SPC25YER018C MMS21P38632 267 aa11.28□□□□□ -0.6
SPC25YER018C RIM4P38741 713 aa11.28□□□□□ -0.6
SPC25YER018C ERP2P39704 215 aa11.28□□□□□ -0.6
SPC25YER018C TMA108P40462 946 aa11.28□□□□□ -0.6
SPC25YER018C PRK1P40494 810 aa11.28□□□□□ -0.6
SPC25YER018C GCN5Q03330 439 aa11.28□□□□□ -0.6
SPC25YER018C SPG3Q04398 127 aaPredicted RBP11.28□□□□□ -0.6
SPC25YER018C YDR018CQ12185 396 aa11.28□□□□□ -0.6
SPC25YER018C RIO1Q12196 484 aaKnown RBP11.28□□□□□ -0.6
SPC25YER018C ARP7Q12406 477 aa11.28□□□□□ -0.6
SPC25YER018C TAO3P40468 2376 aa11.28□□□□□ -0.6
SPC25YER018C PRP9P19736 530 aaKnown RBP11.27□□□□□ -0.61
SPC25YER018C VHC1P38329 1120 aa11.27□□□□□ -0.61
SPC25YER018C FHL1P39521 936 aa11.27□□□□□ -0.61
SPC25YER018C FLC2P39719 783 aa11.27□□□□□ -0.61
SPC25YER018C ARG2P40360 574 aa11.27□□□□□ -0.61
SPC25YER018C NMD5P46970 1048 aa11.27□□□□□ -0.61
SPC25YER018C HER2Q03557 464 aa11.27□□□□□ -0.61
SPC25YER018C RGR1P19263 1082 aa11.26□□□□□ -0.61
SPC25YER018C PEX1P24004 1043 aa11.26□□□□□ -0.61
SPC25YER018C PUF4P25339 888 aaKnown RBP RIP-Chip data11.26□□□□□ -0.61not detected
SPC25YER018C TSA1P34760 196 aaKnown RBP11.26□□□□□ -0.61
SPC25YER018C LAS1P36146 502 aaPredicted RBP11.26□□□□□ -0.61
SPC25YER018C SSP1P38871 571 aa11.26□□□□□ -0.61
SPC25YER018C SAW1P39735 261 aa11.26□□□□□ -0.61
SPC25YER018C YNL320WP42840 284 aa11.26□□□□□ -0.61
SPC25YER018C RGD2P43556 714 aa11.26□□□□□ -0.61
SPC25YER018C MIC19P43594 170 aa11.26□□□□□ -0.61
SPC25YER018C ALY2P47029 1046 aa11.26□□□□□ -0.61
SPC25YER018C KTR6P54070 446 aa11.26□□□□□ -0.61
SPC25YER018C CEG1Q01159 459 aaPredicted RBP11.26□□□□□ -0.61
SPC25YER018C SND1Q04007 877 aa11.26□□□□□ -0.61
SPC25YER018C ECM22Q05958 814 aaPredicted RBP11.26□□□□□ -0.61
SPC25YER018C AAD4Q07747 329 aa11.26□□□□□ -0.61
SPC25YER018C POL3P15436 1097 aa11.25□□□□□ -0.61
SPC25YER018C DAL1P32375 460 aa11.25□□□□□ -0.61
SPC25YER018C HXT3P32466 567 aaKnown RBP11.25□□□□□ -0.61
SPC25YER018C NFU1P32860 256 aa11.25□□□□□ -0.61
SPC25YER018C CDC27P38042 758 aa11.25□□□□□ -0.61
SPC25YER018C PEX31P53203 462 aa11.25□□□□□ -0.61
SPC25YER018C ACM1Q08981 209 aa11.25□□□□□ -0.61
SPC25YER018C SPE1P08432 466 aa11.24□□□□□ -0.61
SPC25YER018C SPO16P17122 198 aa11.24□□□□□ -0.61
SPC25YER018C YCR015CP25616 317 aa11.24□□□□□ -0.61
SPC25YER018C GPI10P30777 616 aa11.24□□□□□ -0.61
SPC25YER018C DSS4P32601 143 aa11.24□□□□□ -0.61
SPC25YER018C SPP381P38282 291 aaPredicted RBP11.24□□□□□ -0.61
SPC25YER018C YBR225WP38321 900 aa11.24□□□□□ -0.61
SPC25YER018C POP4P38336 279 aa11.24□□□□□ -0.61
SPC25YER018C YJL045WP47052 634 aa11.24□□□□□ -0.61
SPC25YER018C TPO1Q07824 586 aa11.24□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms