RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	TUF1	P02992	437 aa	Known RBP	6.29	□□□□□ -1.4
RPN5	YDL147W	NUC1	P08466	329 aa		6.29	□□□□□ -1.4
RPN5	YDL147W	HMG2	P12684	1045 aa		6.29	□□□□□ -1.4
RPN5	YDL147W	LAT1	P12695	482 aa	Known RBP	6.29	□□□□□ -1.4
RPN5	YDL147W	GAS1	P22146	559 aa	Known RBP	6.29	□□□□□ -1.4
RPN5	YDL147W	MCM3	P24279	971 aa	Known RBP	6.29	□□□□□ -1.4
RPN5	YDL147W	XRS2	P33301	854 aa		6.29	□□□□□ -1.4
RPN5	YDL147W	PRP43	P53131	767 aa	Known RBP	6.29	□□□□□ -1.4
RPN5	YDL147W	MTL1	P53214	551 aa		6.29	□□□□□ -1.4
RPN5	YDL147W	GTR1	Q00582	310 aa		6.29	□□□□□ -1.4
RPN5	YDL147W	SSP2	Q08646	371 aa		6.29	□□□□□ -1.4
RPN5	YDL147W	CAF20	P12962	161 aa	Known RBP	6.28	□□□□□ -1.4
RPN5	YDL147W	RER1	P25560	188 aa		6.28	□□□□□ -1.4
RPN5	YDL147W	SEG2	P34250	1132 aa		6.28	□□□□□ -1.4
RPN5	YDL147W	SPC72	P39723	622 aa		6.28	□□□□□ -1.4
RPN5	YDL147W	GET2	P40056	285 aa		6.28	□□□□□ -1.4
RPN5	YDL147W	RAD26	P40352	1085 aa		6.28	□□□□□ -1.4
RPN5	YDL147W	IMA5	P40884	581 aa		6.28	□□□□□ -1.4
RPN5	YDL147W	SMK1	P41808	388 aa		6.28	□□□□□ -1.4
RPN5	YDL147W	MRPL13	Q02204	264 aa		6.28	□□□□□ -1.4
RPN5	YDL147W	TRS130	Q03660	1102 aa		6.28	□□□□□ -1.4
RPN5	YDL147W	OPY2	Q06810	360 aa		6.28	□□□□□ -1.4
RPN5	YDL147W	RPN12	P32496	274 aa		6.27	□□□□□ -1.41
RPN5	YDL147W	TOD6	P34219	525 aa		6.27	□□□□□ -1.41
RPN5	YDL147W	LST4	P34239	828 aa		6.27	□□□□□ -1.41
RPN5	YDL147W	MRPL36	P36531	177 aa		6.27	□□□□□ -1.41
RPN5	YDL147W	NUP60	P39705	539 aa		6.27	□□□□□ -1.41
RPN5	YDL147W	PIG2	P40187	538 aa		6.27	□□□□□ -1.41
RPN5	YDL147W	CIA1	Q05583	330 aa		6.27	□□□□□ -1.41
RPN5	YDL147W	TMA10	Q06177	86 aa		6.27	□□□□□ -1.41
RPN5	YDL147W	YCG1	Q06680	1035 aa		6.27	□□□□□ -1.41
RPN5	YDL147W	CRD1	Q07560	283 aa		6.27	□□□□□ -1.41
RPN5	YDL147W	NEW1	Q08972	1196 aa	Known RBP	6.27	□□□□□ -1.41
RPN5	YDL147W	YLR358C	O13565	187 aa		6.26	□□□□□ -1.41
RPN5	YDL147W	URA3	P03962	267 aa		6.26	□□□□□ -1.41
RPN5	YDL147W	TRP4	P07285	380 aa	Predicted RBP	6.26	□□□□□ -1.41
RPN5	YDL147W	SEC12	P11655	471 aa		6.26	□□□□□ -1.41
RPN5	YDL147W	POL3	P15436	1097 aa		6.26	□□□□□ -1.41
RPN5	YDL147W	STE11	P23561	717 aa		6.26	□□□□□ -1.41
RPN5	YDL147W	STT3	P39007	718 aa	Known RBP	6.26	□□□□□ -1.41
RPN5	YDL147W	BAP3	P41815	604 aa		6.26	□□□□□ -1.41
RPN5	YDL147W	MNN10	P50108	393 aa	Known RBP	6.26	□□□□□ -1.41
RPN5	YDL147W	MUP1	P50276	574 aa		6.26	□□□□□ -1.41
RPN5	YDL147W	UBA2	P52488	636 aa		6.26	□□□□□ -1.41
RPN5	YDL147W	MCM6	P53091	1017 aa	Known RBP	6.26	□□□□□ -1.41
RPN5	YDL147W	CPR6	P53691	371 aa	Known RBP	6.26	□□□□□ -1.41
RPN5	YDL147W	ERG5	P54781	538 aa		6.26	□□□□□ -1.41
RPN5	YDL147W	IWR1	Q07532	353 aa	Predicted RBP	6.26	□□□□□ -1.41
RPN5	YDL147W	AAD4	Q07747	329 aa		6.26	□□□□□ -1.41
RPN5	YDL147W	PCK1	P10963	549 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	RPA135	P22138	1203 aa	Known RBP	6.25	□□□□□ -1.41
RPN5	YDL147W	CLB4	P24871	460 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	MTC7	P32633	139 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	TSA1	P34760	196 aa	Known RBP	6.25	□□□□□ -1.41
RPN5	YDL147W	COS111	P38308	924 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	SFB3	P38810	929 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	LYS9	P38999	446 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	KAP123	P40069	1113 aa	Known RBP	6.25	□□□□□ -1.41
RPN5	YDL147W	PSF2	P40359	213 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	YIL077C	P40508	320 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	ARA2	Q04212	335 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	THI22	Q06490	572 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	CLF1	Q12309	687 aa	Predicted RBP	6.25	□□□□□ -1.41
RPN5	YDL147W	GFA1	P14742	717 aa	Known RBP	6.25	□□□□□ -1.41
RPN5	YDL147W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
RPN5	YDL147W	SIR1	P21691	654 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	ARG1	P22768	420 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	CHS3	P29465	1165 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	MCM10	P32354	571 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	MVD1	P32377	396 aa	Known RBP	6.25	□□□□□ -1.41
RPN5	YDL147W	RRN3	P36070	627 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	REV7	P38927	245 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	FTR1	P40088	404 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	PUG1	P40100	303 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	ELO3	P40319	345 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	ACS1	Q01574	713 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	YFT2	Q06676	274 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	CDA2	Q06703	312 aa		6.25	□□□□□ -1.41
RPN5	YDL147W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
RPN5	YDL147W	PRP6	P19735	899 aa	Predicted RBP	6.24	□□□□□ -1.41
RPN5	YDL147W	PRP28	P23394	588 aa		6.24	□□□□□ -1.41
RPN5	YDL147W	FEN2	P25621	512 aa	Known RBP	6.24	□□□□□ -1.41
RPN5	YDL147W	BCS1	P32839	456 aa		6.24	□□□□□ -1.41
RPN5	YDL147W	RPT3	P33298	428 aa	Known RBP	6.24	□□□□□ -1.41
RPN5	YDL147W	SLC1	P33333	303 aa		6.24	□□□□□ -1.41
RPN5	YDL147W	CDS1	P38221	457 aa		6.24	□□□□□ -1.41
RPN5	YDL147W	FMO1	P38866	432 aa		6.24	□□□□□ -1.41
RPN5	YDL147W	CRG1	P38892	291 aa	RIP-Chip data	6.24	□□□□□ -1.41	not detected
RPN5	YDL147W	HOS4	P40480	1083 aa		6.24	□□□□□ -1.41
RPN5	YDL147W	FDC1	Q03034	503 aa		6.24	□□□□□ -1.41
RPN5	YDL147W	EIS1	Q05050	843 aa	Known RBP	6.24	□□□□□ -1.41
RPN5	YDL147W	ZRT2	Q12436	422 aa		6.24	□□□□□ -1.41
RPN5	YDL147W	YCL049C	P25577	312 aa		6.23	□□□□□ -1.41
RPN5	YDL147W	NTH1	P32356	751 aa		6.23	□□□□□ -1.41
RPN5	YDL147W	HIS7	P33734	552 aa	Known RBP	6.23	□□□□□ -1.41
RPN5	YDL147W	UME6	P39001	836 aa		6.23	□□□□□ -1.41
RPN5	YDL147W	TMA108	P40462	946 aa		6.23	□□□□□ -1.41
RPN5	YDL147W	MNT3	P40549	630 aa		6.23	□□□□□ -1.41
RPN5	YDL147W	GSM1	P42950	618 aa		6.23	□□□□□ -1.41
RPN5	YDL147W	CTT1	P06115	562 aa		6.22	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms