RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN4	YDL020C	RFX1	P48743	811 aa		4.7	□□□□□ -1.66
RPN4	YDL020C	MNT2	P53059	558 aa		4.7	□□□□□ -1.66
RPN4	YDL020C	PEF1	P53238	335 aa		4.7	□□□□□ -1.66
RPN4	YDL020C	RTK1	Q12100	620 aa	Predicted RBP	4.7	□□□□□ -1.66
RPN4	YDL020C	CLF1	Q12309	687 aa	Predicted RBP	4.7	□□□□□ -1.66
RPN4	YDL020C	YOL114C	Q12322	202 aa		4.7	□□□□□ -1.66
RPN4	YDL020C	TGL1	P34163	548 aa		4.7	□□□□□ -1.66
RPN4	YDL020C	PHO11	P35842	467 aa		4.7	□□□□□ -1.66
RPN4	YDL020C	RMA1	P36001	430 aa	Known RBP	4.7	□□□□□ -1.66
RPN4	YDL020C	PHO12	P38693	467 aa		4.7	□□□□□ -1.66
RPN4	YDL020C	PMC1	P38929	1173 aa	Predicted RBP	4.7	□□□□□ -1.66
RPN4	YDL020C	SSP120	P39931	234 aa	Known RBP	4.7	□□□□□ -1.66
RPN4	YDL020C	FTR1	P40088	404 aa		4.7	□□□□□ -1.66
RPN4	YDL020C	AIM21	P40563	679 aa		4.7	□□□□□ -1.66
RPN4	YDL020C	MAD2	P40958	196 aa		4.7	□□□□□ -1.66
RPN4	YDL020C	PUS4	P48567	403 aa	Known RBP	4.7	□□□□□ -1.66
RPN4	YDL020C	TEL2	P53038	688 aa		4.7	□□□□□ -1.66
RPN4	YDL020C	PGI1	P12709	554 aa	Known RBP	4.69	□□□□□ -1.66
RPN4	YDL020C	TUP1	P16649	713 aa		4.69	□□□□□ -1.66
RPN4	YDL020C	CWH43	P25618	953 aa		4.69	□□□□□ -1.66
RPN4	YDL020C	PWP2	P25635	923 aa	Known RBP	4.69	□□□□□ -1.66
RPN4	YDL020C	VPS24	P36095	224 aa	Known RBP	4.69	□□□□□ -1.66
RPN4	YDL020C	YHL041W	P38730	149 aa		4.69	□□□□□ -1.66
RPN4	YDL020C	QRI7	P43122	407 aa		4.69	□□□□□ -1.66
RPN4	YDL020C	FHN1	P53279	174 aa		4.69	□□□□□ -1.66
RPN4	YDL020C	YAP1802	P53309	568 aa		4.69	□□□□□ -1.66
RPN4	YDL020C	FDC1	Q03034	503 aa		4.69	□□□□□ -1.66
RPN4	YDL020C	YCG1	Q06680	1035 aa		4.69	□□□□□ -1.66
RPN4	YDL020C	AIM41	Q12032	185 aa		4.69	□□□□□ -1.66
RPN4	YDL020C	MSS18	P08593	268 aa		4.68	□□□□□ -1.66
RPN4	YDL020C	YCR015C	P25616	317 aa		4.68	□□□□□ -1.66
RPN4	YDL020C	MPS3	P47069	682 aa		4.68	□□□□□ -1.66
RPN4	YDL020C	YDL183C	P48569	320 aa		4.68	□□□□□ -1.66
RPN4	YDL020C	SUN4	P53616	420 aa		4.68	□□□□□ -1.66
RPN4	YDL020C	VMS1	Q04311	632 aa	Known RBP	4.68	□□□□□ -1.66
RPN4	YDL020C	HLR1	Q04429	423 aa		4.68	□□□□□ -1.66
RPN4	YDL020C	MLH3	Q12083	715 aa		4.68	□□□□□ -1.66
RPN4	YDL020C	DIN7	Q12086	430 aa		4.68	□□□□□ -1.66
RPN4	YDL020C	ARP7	Q12406	477 aa		4.68	□□□□□ -1.66
RPN4	YDL020C	VAS1	P07806	1104 aa	Known RBP	4.67	□□□□□ -1.66
RPN4	YDL020C	ADH4	P10127	382 aa		4.67	□□□□□ -1.66
RPN4	YDL020C	CBP3	P21560	335 aa		4.67	□□□□□ -1.66
RPN4	YDL020C	PET309	P32522	965 aa	Predicted RBP	4.67	□□□□□ -1.66
RPN4	YDL020C	YKL222C	P35995	705 aa		4.67	□□□□□ -1.66
RPN4	YDL020C	TMN3	P40071	706 aa		4.67	□□□□□ -1.66
RPN4	YDL020C	TAH11	P47112	604 aa		4.67	□□□□□ -1.66
RPN4	YDL020C	MSE1	P48525	536 aa		4.67	□□□□□ -1.66
RPN4	YDL020C	MDR1	P53258	950 aa		4.67	□□□□□ -1.66
RPN4	YDL020C	PAP2	P53632	584 aa	Known RBP	4.67	□□□□□ -1.66
RPN4	YDL020C	YNR071C	P53757	342 aa		4.67	□□□□□ -1.66
RPN4	YDL020C	RIA1	P53893	1110 aa		4.67	□□□□□ -1.66
RPN4	YDL020C	TEP1	P53916	434 aa		4.67	□□□□□ -1.66
RPN4	YDL020C	TIM50	Q02776	476 aa		4.67	□□□□□ -1.66
RPN4	YDL020C	ATG16	Q03818	150 aa		4.67	□□□□□ -1.66
RPN4	YDL020C	TUB2	P02557	457 aa	Known RBP	4.66	□□□□□ -1.66
RPN4	YDL020C	THR1	P17423	357 aa	Known RBP	4.66	□□□□□ -1.66
RPN4	YDL020C	NTH1	P32356	751 aa		4.66	□□□□□ -1.66
RPN4	YDL020C	MSS1	P32559	526 aa	Predicted RBP	4.66	□□□□□ -1.66
RPN4	YDL020C	TAF5	P38129	798 aa		4.66	□□□□□ -1.66
RPN4	YDL020C	FUI1	P38196	639 aa		4.66	□□□□□ -1.66
RPN4	YDL020C	EHT1	P38295	451 aa		4.66	□□□□□ -1.66
RPN4	YDL020C	KHA1	P40309	873 aa		4.66	□□□□□ -1.66
RPN4	YDL020C	YMR206W	Q03695	313 aa		4.66	□□□□□ -1.66
RPN4	YDL020C	BRE1	Q07457	700 aa	Known RBP	4.66	□□□□□ -1.66
RPN4	YDL020C	HOS1	Q12214	470 aa		4.66	□□□□□ -1.66
RPN4	YDL020C	DBP10	Q12389	995 aa	Known RBP	4.66	□□□□□ -1.66
RPN4	YDL020C	TUF1	P02992	437 aa	Known RBP	4.65	□□□□□ -1.66
RPN4	YDL020C	URA3	P03962	267 aa		4.65	□□□□□ -1.66
RPN4	YDL020C	TOP1	P04786	769 aa		4.65	□□□□□ -1.66
RPN4	YDL020C	ARG1	P22768	420 aa		4.65	□□□□□ -1.66
RPN4	YDL020C	SWD1	P39706	426 aa		4.65	□□□□□ -1.66
RPN4	YDL020C	HIM1	Q06674	414 aa		4.65	□□□□□ -1.66
RPN4	YDL020C	USV1	Q12132	391 aa		4.65	□□□□□ -1.66
RPN4	YDL020C	CTP1	P38152	299 aa		4.65	□□□□□ -1.67
RPN4	YDL020C	YHL017W	P38745	532 aa		4.65	□□□□□ -1.67
RPN4	YDL020C	PCL5	P38794	229 aa		4.65	□□□□□ -1.67
RPN4	YDL020C	IES5	P40060	125 aa		4.65	□□□□□ -1.67
RPN4	YDL020C	IMA5	P40884	581 aa		4.65	□□□□□ -1.67
RPN4	YDL020C	MOT3	P54785	490 aa	Known RBP	4.65	□□□□□ -1.67
RPN4	YDL020C	SSL2	Q00578	843 aa		4.65	□□□□□ -1.67
RPN4	YDL020C	TRI1	Q05024	226 aa		4.65	□□□□□ -1.67
RPN4	YDL020C	MCH5	Q08777	521 aa		4.65	□□□□□ -1.67
RPN4	YDL020C	PUS9	Q12069	462 aa		4.65	□□□□□ -1.67
RPN4	YDL020C	ABF1	P14164	731 aa		4.64	□□□□□ -1.67
RPN4	YDL020C	APA1	P16550	321 aa	Known RBP	4.64	□□□□□ -1.67
RPN4	YDL020C	PHO81	P17442	1178 aa		4.64	□□□□□ -1.67
RPN4	YDL020C	FUB1	P25659	250 aa		4.64	□□□□□ -1.67
RPN4	YDL020C	MAD3	P47074	515 aa		4.64	□□□□□ -1.67
RPN4	YDL020C	MUK1	Q02866	612 aa		4.64	□□□□□ -1.67
RPN4	YDL020C	YDL086W	Q07505	273 aa		4.64	□□□□□ -1.67
RPN4	YDL020C	IZH3	Q07959	543 aa		4.64	□□□□□ -1.67
RPN4	YDL020C	SEC18	P18759	758 aa	Known RBP	4.63	□□□□□ -1.67
RPN4	YDL020C	MSH1	P25846	959 aa		4.63	□□□□□ -1.67
RPN4	YDL020C	PTH2	P34222	208 aa		4.63	□□□□□ -1.67
RPN4	YDL020C	SET3	P36124	751 aa		4.63	□□□□□ -1.67
RPN4	YDL020C	CBR1	P38626	284 aa	Known RBP	4.63	□□□□□ -1.67
RPN4	YDL020C	ACA1	P39970	489 aa		4.63	□□□□□ -1.67
RPN4	YDL020C	YEL025C	P39991	1188 aa		4.63	□□□□□ -1.67
RPN4	YDL020C	YGR021W	P53212	290 aa		4.63	□□□□□ -1.67
RPN4	YDL020C	YGR054W	P53235	642 aa	Known RBP	4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 111.1 ms