RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeastyeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC50YCR094W MDM12Q92328 271 aa3.05□□□□□ -1.92
CDC50YCR094W YPR089WO13585 888 aa3.04□□□□□ -1.92
CDC50YCR094W RPS9BP05755 195 aaKnown RBP3.04□□□□□ -1.92
CDC50YCR094W FRS1P15624 595 aaKnown RBP3.04□□□□□ -1.92
CDC50YCR094W YAT2P40017 923 aa3.04□□□□□ -1.92
CDC50YCR094W YNL018CP53976 612 aa3.04□□□□□ -1.92
CDC50YCR094W HER1Q12276 1246 aa3.04□□□□□ -1.92
CDC50YCR094W SEC3P33332 1336 aaKnown RBP3.03□□□□□ -1.92
CDC50YCR094W PET127P32606 800 aa3.03□□□□□ -1.92
CDC50YCR094W BRN1P38170 754 aa3.03□□□□□ -1.92
CDC50YCR094W EXO1P39875 702 aa3.03□□□□□ -1.92
CDC50YCR094W NUG1P40010 520 aaKnown RBP3.03□□□□□ -1.92
CDC50YCR094W COQ6P53318 479 aa3.03□□□□□ -1.92
CDC50YCR094W BSP1Q06604 576 aa3.03□□□□□ -1.92
CDC50YCR094W YLR111WQ12528 110 aa3.03□□□□□ -1.92
CDC50YCR094W YOR111WQ99210 232 aa3.03□□□□□ -1.92
CDC50YCR094W YMR084WA2P2R3 262 aa3.02□□□□□ -1.93
CDC50YCR094W CNE1P27825 502 aa3.02□□□□□ -1.93
CDC50YCR094W NMD2P38798 1089 aaKnown RBP3.02□□□□□ -1.93
CDC50YCR094W OPT1P40897 799 aa3.02□□□□□ -1.93
CDC50YCR094W VBA4Q04602 768 aaKnown RBP3.02□□□□□ -1.93
CDC50YCR094W NDD1Q08887 554 aa3.02□□□□□ -1.93
CDC50YCR094W DCS2Q12123 353 aa3.02□□□□□ -1.93
CDC50YCR094W YMR085WP0CF18 432 aa3.01□□□□□ -1.93
CDC50YCR094W ERR1P0CX10 437 aa3.01□□□□□ -1.93
CDC50YCR094W ERR2P0CX11 437 aa3.01□□□□□ -1.93
CDC50YCR094W YER190C-BP0CX94 160 aa3.01□□□□□ -1.93
CDC50YCR094W YEL077W-AP0CX95 160 aa3.01□□□□□ -1.93
CDC50YCR094W YGR296C-BP0CX96 160 aa3.01□□□□□ -1.93
CDC50YCR094W YPL283W-BP0CX97 160 aa3.01□□□□□ -1.93
CDC50YCR094W YPR204C-AP0CX98 160 aa3.01□□□□□ -1.93
CDC50YCR094W GSY2P27472 705 aa3.01□□□□□ -1.93
CDC50YCR094W MGM1P32266 881 aa3.01□□□□□ -1.93
CDC50YCR094W OAF1P39720 1047 aaPredicted RBP3.01□□□□□ -1.93
CDC50YCR094W TMN3P40071 706 aa3.01□□□□□ -1.93
CDC50YCR094W GPD1Q00055 391 aaKnown RBP3.01□□□□□ -1.93
CDC50YCR094W RCR2Q03446 210 aaKnown RBP3.01□□□□□ -1.93
CDC50YCR094W YDL073WQ07454 984 aa3.01□□□□□ -1.93
CDC50YCR094W SRD1P09007 221 aa3□□□□□ -1.93
CDC50YCR094W WHI2P12611 486 aa3□□□□□ -1.93
CDC50YCR094W GSY1P23337 708 aa3□□□□□ -1.93
CDC50YCR094W MEF1P25039 761 aa3□□□□□ -1.93
CDC50YCR094W IMG2P25642 146 aaPredicted RBP3□□□□□ -1.93
CDC50YCR094W PPE1P38796 400 aa3□□□□□ -1.93
CDC50YCR094W DOT6P40059 670 aaKnown RBP3□□□□□ -1.93
CDC50YCR094W YFL015CP43578 164 aa3□□□□□ -1.93
CDC50YCR094W RNH70P53331 553 aa3□□□□□ -1.93
CDC50YCR094W MFM1Q02783 413 aa3□□□□□ -1.93
CDC50YCR094W RPN4Q03465 531 aa3□□□□□ -1.93
CDC50YCR094W NSE3Q05541 303 aa3□□□□□ -1.93
CDC50YCR094W BUD7Q08754 746 aa3□□□□□ -1.93
CDC50YCR094W RDL1Q12305 139 aaKnown RBP3□□□□□ -1.93
CDC50YCR094W MRPL7P36519 292 aa2.99□□□□□ -1.93
CDC50YCR094W FLO5P38894 1075 aa2.99□□□□□ -1.93
CDC50YCR094W BEM4P39011 633 aa2.99□□□□□ -1.93
CDC50YCR094W YMR124WP39523 943 aaKnown RBP2.99□□□□□ -1.93
CDC50YCR094W YIL024CP40543 189 aa2.99□□□□□ -1.93
CDC50YCR094W BUD6P41697 788 aa2.99□□□□□ -1.93
CDC50YCR094W AIM14P53109 570 aa2.99□□□□□ -1.93
CDC50YCR094W ALG12P53730 551 aa2.99□□□□□ -1.93
CDC50YCR094W EFR3Q03653 782 aaKnown RBP2.99□□□□□ -1.93
CDC50YCR094W MRPL1Q04599 285 aa2.99□□□□□ -1.93
CDC50YCR094W SCW10Q04951 389 aa2.99□□□□□ -1.93
CDC50YCR094W YTH1Q06102 208 aaPredicted RBP2.99□□□□□ -1.93
CDC50YCR094W ATG33Q06485 197 aa2.99□□□□□ -1.93
CDC50YCR094W SRL1Q08673 210 aa2.99□□□□□ -1.93
CDC50YCR094W HMG1P12683 1054 aa2.98□□□□□ -1.93
CDC50YCR094W SRP40P32583 406 aaPredicted RBP2.98□□□□□ -1.93
CDC50YCR094W YKL091CP33324 310 aaKnown RBP2.98□□□□□ -1.93
CDC50YCR094W PBP2P38151 413 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
CDC50YCR094W DSS1P39112 969 aa2.98□□□□□ -1.93
CDC50YCR094W ENP2P48234 707 aaKnown RBP2.98□□□□□ -1.93
CDC50YCR094W BUD17P53727 317 aa2.98□□□□□ -1.93
CDC50YCR094W STI1P15705 589 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
CDC50YCR094W IME1P21190 360 aa2.97□□□□□ -1.93
CDC50YCR094W PRP22P24384 1145 aaKnown RBP2.97□□□□□ -1.93
CDC50YCR094W ATO2P32907 282 aa2.97□□□□□ -1.93
CDC50YCR094W PEX6P33760 1030 aa2.97□□□□□ -1.93
CDC50YCR094W CEF1Q03654 590 aaPredicted RBP2.97□□□□□ -1.93
CDC50YCR094W ENT2Q05785 613 aa2.97□□□□□ -1.93
CDC50YCR094W SNA4Q07549 140 aa2.97□□□□□ -1.93
CDC50YCR094W YPT1P01123 206 aaKnown RBP2.96□□□□□ -1.94
CDC50YCR094W YCP4P25349 247 aaKnown RBP2.96□□□□□ -1.94
CDC50YCR094W YKU70P32807 602 aa2.96□□□□□ -1.94
CDC50YCR094W RRP14P36080 434 aaKnown RBP2.96□□□□□ -1.94
CDC50YCR094W BUD8P41698 603 aa2.96□□□□□ -1.94
CDC50YCR094W YGR054WP53235 642 aaKnown RBP2.96□□□□□ -1.94
CDC50YCR094W FDC1Q03034 503 aa2.96□□□□□ -1.94
CDC50YCR094W SPN1Q06505 410 aaPredicted RBP2.96□□□□□ -1.94
CDC50YCR094W YPL216WQ08964 1102 aa2.96□□□□□ -1.94
CDC50YCR094W CDC53Q12018 815 aaKnown RBP2.96□□□□□ -1.94
CDC50YCR094W CHZ1P40019 153 aaPredicted RBP2.95□□□□□ -1.94
CDC50YCR094W CFD1P40558 293 aa2.95□□□□□ -1.94
CDC50YCR094W TDA10P42938 290 aa2.95□□□□□ -1.94
CDC50YCR094W SAE2P46946 345 aa2.95□□□□□ -1.94
CDC50YCR094W LYS20P48570 428 aaKnown RBP2.95□□□□□ -1.94
CDC50YCR094W SPO1P53541 631 aa2.95□□□□□ -1.94
CDC50YCR094W COP1P53622 1201 aaKnown RBP2.95□□□□□ -1.94
CDC50YCR094W RPS15Q01855 142 aaKnown RBP2.95□□□□□ -1.94
CDC50YCR094W TIM50Q02776 476 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms