RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W RGC1Q06108 1083 aaKnown RBP5.57□□□□□ -1.52
RER1YCL001W ERR1P0CX10 437 aa5.56□□□□□ -1.52
RER1YCL001W ERR2P0CX11 437 aa5.56□□□□□ -1.52
RER1YCL001W YKL091CP33324 310 aaKnown RBP5.56□□□□□ -1.52
RER1YCL001W CAF16P43569 289 aa5.56□□□□□ -1.52
RER1YCL001W NPY1P53164 384 aa5.56□□□□□ -1.52
RER1YCL001W SNP1Q00916 300 aaPredicted RBP5.56□□□□□ -1.52
RER1YCL001W REC102Q02721 264 aa5.56□□□□□ -1.52
RER1YCL001W THI7Q05998 598 aa5.56□□□□□ -1.52
RER1YCL001W MLH3Q12083 715 aa5.56□□□□□ -1.52
RER1YCL001W CLF1Q12309 687 aaPredicted RBP5.56□□□□□ -1.52
RER1YCL001W MDM12Q92328 271 aa5.56□□□□□ -1.52
RER1YCL001W Q0142Q9ZZW4 58 aa5.56□□□□□ -1.52
RER1YCL001W KCC4P25389 1037 aa5.55□□□□□ -1.52
RER1YCL001W GET2P40056 285 aa5.55□□□□□ -1.52
RER1YCL001W GID8P40208 455 aa5.55□□□□□ -1.52
RER1YCL001W MDG1P53885 366 aa5.55□□□□□ -1.52
RER1YCL001W AFT2Q08957 416 aa5.55□□□□□ -1.52
RER1YCL001W NYV1Q12255 253 aa5.55□□□□□ -1.52
RER1YCL001W YOR131CQ12486 218 aa5.55□□□□□ -1.52
RER1YCL001W THR1P17423 357 aaKnown RBP5.54□□□□□ -1.52
RER1YCL001W RNR1P21524 888 aaKnown RBP5.54□□□□□ -1.52
RER1YCL001W YNL050CP53952 270 aa5.54□□□□□ -1.52
RER1YCL001W RMT2Q03305 412 aa5.54□□□□□ -1.52
RER1YCL001W FPR4Q06205 392 aaPredicted RBP5.54□□□□□ -1.52
RER1YCL001W ZRT2Q12436 422 aa5.54□□□□□ -1.52
RER1YCL001W LYS2P07702 1392 aa5.54□□□□□ -1.52
RER1YCL001W CDC9P04819 755 aa5.53□□□□□ -1.52
RER1YCL001W CCR4P31384 837 aaKnown RBP5.53□□□□□ -1.52
RER1YCL001W CRP1P38845 465 aaKnown RBP5.53□□□□□ -1.52
RER1YCL001W UBC9P50623 157 aaPredicted RBP5.53□□□□□ -1.52
RER1YCL001W AIM44Q99299 758 aa5.53□□□□□ -1.52
RER1YCL001W MIH1P23748 554 aa5.52□□□□□ -1.53
RER1YCL001W PEX1P24004 1043 aa5.52□□□□□ -1.53
RER1YCL001W PRD1P25375 712 aa5.52□□□□□ -1.53
RER1YCL001W YKR051WP36142 418 aa5.52□□□□□ -1.53
RER1YCL001W RPN4Q03465 531 aa5.52□□□□□ -1.53
RER1YCL001W RPN7Q06103 429 aaKnown RBP5.52□□□□□ -1.53
RER1YCL001W USV1Q12132 391 aa5.52□□□□□ -1.53
RER1YCL001W CTT1P06115 562 aa5.51□□□□□ -1.53
RER1YCL001W YKR018CP36114 725 aa5.51□□□□□ -1.53
RER1YCL001W PAC2P39937 518 aa5.51□□□□□ -1.53
RER1YCL001W EAF6P47128 113 aa5.51□□□□□ -1.53
RER1YCL001W MRK1P50873 501 aa5.51□□□□□ -1.53
RER1YCL001W PCL10P53124 433 aa5.51□□□□□ -1.53
RER1YCL001W MRI1Q06489 411 aaKnown RBP5.51□□□□□ -1.53
RER1YCL001W GSY1P23337 708 aa5.5□□□□□ -1.53
RER1YCL001W FUB1P25659 250 aa5.5□□□□□ -1.53
RER1YCL001W HSL7P38274 827 aa5.5□□□□□ -1.53
RER1YCL001W MUP3P38734 546 aa5.5□□□□□ -1.53
RER1YCL001W MAM1P40065 302 aa5.5□□□□□ -1.53
RER1YCL001W RTR1P40084 226 aaPredicted RBP5.5□□□□□ -1.53
RER1YCL001W NOP9P47077 666 aaKnown RBP5.5□□□□□ -1.53
RER1YCL001W NHX1Q04121 633 aa5.5□□□□□ -1.53
RER1YCL001W RIX7Q07844 837 aaKnown RBP5.5□□□□□ -1.53
RER1YCL001W ALE1Q08548 619 aa5.5□□□□□ -1.53
RER1YCL001W SSP2Q08646 371 aa5.5□□□□□ -1.53
RER1YCL001W TIM23P32897 222 aa5.49□□□□□ -1.53
RER1YCL001W SET3P36124 751 aa5.49□□□□□ -1.53
RER1YCL001W PBP2P38151 413 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
RER1YCL001W YFR016CP43597 1233 aaKnown RBP5.49□□□□□ -1.53
RER1YCL001W UTP10P42945 1769 aaKnown RBP5.48□□□□□ -1.53
RER1YCL001W HOG1P32485 435 aa5.48□□□□□ -1.53
RER1YCL001W ORC2P32833 620 aa5.48□□□□□ -1.53
RER1YCL001W GMH1P36125 273 aa5.48□□□□□ -1.53
RER1YCL001W PFF1P38244 976 aa5.48□□□□□ -1.53
RER1YCL001W BUD6P41697 788 aa5.48□□□□□ -1.53
RER1YCL001W BUD27P43573 796 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
RER1YCL001W OSW7P43611 510 aa5.48□□□□□ -1.53
RER1YCL001W ARP4P80428 489 aa5.48□□□□□ -1.53
RER1YCL001W THI22Q06490 572 aa5.48□□□□□ -1.53
RER1YCL001W ICT1Q12385 394 aa5.48□□□□□ -1.53
RER1YCL001W CIT2P08679 460 aa5.47□□□□□ -1.53
RER1YCL001W LPD1P09624 499 aaKnown RBP5.47□□□□□ -1.53
RER1YCL001W VPS34P22543 875 aa5.47□□□□□ -1.53
RER1YCL001W MEF1P25039 761 aa5.47□□□□□ -1.53
RER1YCL001W VBA3P25594 458 aa5.47□□□□□ -1.53
RER1YCL001W DIB1Q06819 143 aaPredicted RBP5.47□□□□□ -1.53
RER1YCL001W HOM2P13663 365 aaKnown RBP5.46□□□□□ -1.54
RER1YCL001W BIT2P38346 545 aa5.46□□□□□ -1.54
RER1YCL001W RSC8P43609 557 aaKnown RBP5.46□□□□□ -1.54
RER1YCL001W DIA2Q08496 732 aaPredicted RBP5.46□□□□□ -1.54
RER1YCL001W ECM3Q99252 613 aa5.46□□□□□ -1.54
RER1YCL001W SSK22P25390 1331 aaPredicted RBP5.46□□□□□ -1.54
RER1YCL001W RPS9BP05755 195 aaKnown RBP5.45□□□□□ -1.54
RER1YCL001W SRD1P09007 221 aa5.45□□□□□ -1.54
RER1YCL001W PRP28P23394 588 aa5.45□□□□□ -1.54
RER1YCL001W BCS1P32839 456 aa5.45□□□□□ -1.54
RER1YCL001W SEC6P32844 805 aa5.45□□□□□ -1.54
RER1YCL001W SER1P33330 395 aaKnown RBP5.45□□□□□ -1.54
RER1YCL001W DSS1P39112 969 aa5.45□□□□□ -1.54
RER1YCL001W PIG2P40187 538 aa5.45□□□□□ -1.54
RER1YCL001W COX18P53239 316 aa5.45□□□□□ -1.54
RER1YCL001W HEF3P53978 1044 aaKnown RBP5.45□□□□□ -1.54
RER1YCL001W LEE1Q02799 301 aaKnown RBP5.45□□□□□ -1.54
RER1YCL001W ERO1Q03103 563 aa5.45□□□□□ -1.54
RER1YCL001W OSW1Q08692 278 aa5.45□□□□□ -1.54
RER1YCL001W CTI6Q08923 506 aa5.45□□□□□ -1.54
RER1YCL001W BMS1Q08965 1183 aaKnown RBP5.45□□□□□ -1.54
RER1YCL001W RPP0P05317 312 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms